RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 FAM196AQ6ZSG2 479 aa13.31□□□□□ -0.28
SRRM1-217ENST00000490543 STRN4Q9NRL3 753 aa13.31□□□□□ -0.28
SRRM1-217ENST00000490543 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
SRRM1-217ENST00000490543 KIAA0232Q92628 1395 aa13.31□□□□□ -0.28
SRRM1-217ENST00000490543 ADGRB2O60241 1585 aa13.3□□□□□ -0.28
SRRM1-217ENST00000490543 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
SRRM1-217ENST00000490543 ADGRB1O14514 1584 aa13.29□□□□□ -0.28
SRRM1-217ENST00000490543 ZC3H6P61129 1189 aaKnown RBP13.29□□□□□ -0.28
SRRM1-217ENST00000490543 NUTM2GQ5VZR2 741 aa13.29□□□□□ -0.28
SRRM1-217ENST00000490543 USP35Q9P2H5 1018 aa13.29□□□□□ -0.28
SRRM1-217ENST00000490543 CRYBG1Q9Y4K1 1723 aa13.29□□□□□ -0.28
SRRM1-217ENST00000490543 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
SRRM1-217ENST00000490543 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
SRRM1-217ENST00000490543 YY1P25490 414 aa13.26□□□□□ -0.29
SRRM1-217ENST00000490543 ARSIQ5FYB1 569 aa13.26□□□□□ -0.29
SRRM1-217ENST00000490543 NUDT16Q96DE0 195 aaKnown RBP13.26□□□□□ -0.29
SRRM1-217ENST00000490543 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
SRRM1-217ENST00000490543 EIF3AQ14152 1382 aaKnown RBP13.25□□□□□ -0.29
SRRM1-217ENST00000490543 PDE3BQ13370 1112 aa13.25□□□□□ -0.29
SRRM1-217ENST00000490543 LARP1Q6PKG0 1096 aaKnown RBP13.25□□□□□ -0.29
SRRM1-217ENST00000490543 PARD3Q8TEW0 1356 aa13.24□□□□□ -0.29
SRRM1-217ENST00000490543 EVA1CP58658 441 aa13.24□□□□□ -0.29
SRRM1-217ENST00000490543 BARGINQ6ZT62 677 aa13.24□□□□□ -0.29
SRRM1-217ENST00000490543 DCAF11Q8TEB1 546 aa13.24□□□□□ -0.29
SRRM1-217ENST00000490543 ERBB3P21860 1342 aa13.23□□□□□ -0.29
SRRM1-217ENST00000490543 KHSRPQ92945 711 aaKnown RBP eCLIP13.23□□□□□ -0.292e-12■■□□□ 13.6
SRRM1-217ENST00000490543 ATP7BP35670 1465 aa13.23□□□□□ -0.29
SRRM1-217ENST00000490543 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
SRRM1-217ENST00000490543 SLC34A2O95436 690 aa13.22□□□□□ -0.29
SRRM1-217ENST00000490543 FOXK1P85037 733 aa13.22□□□□□ -0.29
SRRM1-217ENST00000490543 NBPF8Q3BBV2 869 aa13.22□□□□□ -0.29
SRRM1-217ENST00000490543 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
SRRM1-217ENST00000490543 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
SRRM1-217ENST00000490543 CAMTA1Q9Y6Y1 1673 aa13.21□□□□□ -0.29
SRRM1-217ENST00000490543 ACEP12821 1306 aa13.21□□□□□ -0.29
SRRM1-217ENST00000490543 TCP11L2Q8N4U5 519 aa13.21□□□□□ -0.29
SRRM1-217ENST00000490543 NUP188Q5SRE5 1749 aa13.21□□□□□ -0.3
SRRM1-217ENST00000490543 RREB1Q92766 1687 aa13.21□□□□□ -0.3
SRRM1-217ENST00000490543 PHRF1Q9P1Y6 1649 aaKnown RBP13.21□□□□□ -0.3
SRRM1-217ENST00000490543 KCNQ2O43526 872 aa13.2□□□□□ -0.3
SRRM1-217ENST00000490543 DSG2Q14126 1118 aa13.2□□□□□ -0.3
SRRM1-217ENST00000490543 SPON1Q9HCB6 807 aa13.2□□□□□ -0.3
SRRM1-217ENST00000490543 PLPP6Q8IY26 295 aa13.19□□□□□ -0.3
SRRM1-217ENST00000490543 ABTB2Q8N961 1025 aa13.19□□□□□ -0.3
SRRM1-217ENST00000490543 BBXQ8WY36 941 aaPredicted RBP13.19□□□□□ -0.3
SRRM1-217ENST00000490543 PPP1R1BQ9UD71 204 aaPredicted RBP13.19□□□□□ -0.3
SRRM1-217ENST00000490543 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
SRRM1-217ENST00000490543 VARS2Q5ST30 1063 aaKnown RBP13.18□□□□□ -0.3
SRRM1-217ENST00000490543 PTF1AQ7RTS3 328 aa13.18□□□□□ -0.3
SRRM1-217ENST00000490543 CRISPLD2Q9H0B8 497 aa13.18□□□□□ -0.3
SRRM1-217ENST00000490543 PCDHGA4Q9Y5G9 962 aa13.18□□□□□ -0.3
SRRM1-217ENST00000490543 PLEKHG3A1L390 1219 aa13.17□□□□□ -0.3
SRRM1-217ENST00000490543 PDGFDQ9GZP0 370 aaPredicted RBP13.17□□□□□ -0.3
SRRM1-217ENST00000490543 CPDO75976 1380 aa13.17□□□□□ -0.3
SRRM1-217ENST00000490543 RAB3GAP2Q9H2M9 1393 aa13.17□□□□□ -0.3
SRRM1-217ENST00000490543 USP19O94966 1318 aa13.16□□□□□ -0.3
SRRM1-217ENST00000490543 GCP02774 474 aa13.16□□□□□ -0.3
SRRM1-217ENST00000490543 ITSN1Q15811 1721 aa13.16□□□□□ -0.3
SRRM1-217ENST00000490543 ARHGEF28Q8N1W1 1705 aaKnown RBP13.16□□□□□ -0.3
SRRM1-217ENST00000490543 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
SRRM1-217ENST00000490543 LMO7Q8WWI1 1683 aa13.15□□□□□ -0.3
SRRM1-217ENST00000490543 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
SRRM1-217ENST00000490543 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
SRRM1-217ENST00000490543 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
SRRM1-217ENST00000490543 THRAP3Q9Y2W1 955 aaKnown RBP13.15□□□□□ -0.3
SRRM1-217ENST00000490543 NUDT7P0C024 238 aa13.14□□□□□ -0.31
SRRM1-217ENST00000490543 NINLQ9Y2I6 1382 aa13.14□□□□□ -0.31
SRRM1-217ENST00000490543 COL5A2P05997 1499 aaPredicted RBP13.13□□□□□ -0.31
SRRM1-217ENST00000490543 ZBTB7CA1YPR0 619 aa13.13□□□□□ -0.31
SRRM1-217ENST00000490543 PLSCR1O15162 318 aa13.13□□□□□ -0.31
SRRM1-217ENST00000490543 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
SRRM1-217ENST00000490543 STAC3Q96MF2 364 aa13.13□□□□□ -0.31
SRRM1-217ENST00000490543 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
SRRM1-217ENST00000490543 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
SRRM1-217ENST00000490543 PARP4Q9UKK3 1724 aaKnown RBP13.12□□□□□ -0.31
SRRM1-217ENST00000490543 PEAK1Q9H792 1746 aa13.11□□□□□ -0.31
SRRM1-217ENST00000490543 ZBTB7AO95365 584 aa13.11□□□□□ -0.31
SRRM1-217ENST00000490543 PDE4AP27815 886 aa13.11□□□□□ -0.31
SRRM1-217ENST00000490543 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
SRRM1-217ENST00000490543 PTCD2Q8WV60 388 aaKnown RBP13.11□□□□□ -0.31
SRRM1-217ENST00000490543 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
SRRM1-217ENST00000490543 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
SRRM1-217ENST00000490543 CRB1P82279 1406 aa13.11□□□□□ -0.31
SRRM1-217ENST00000490543 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
SRRM1-217ENST00000490543 C11orf95C9JLR9 678 aaPredicted RBP13.1□□□□□ -0.31
SRRM1-217ENST00000490543 PTGER2P43116 358 aa13.1□□□□□ -0.31
SRRM1-217ENST00000490543 DDB1Q16531 1140 aa13.1□□□□□ -0.31
SRRM1-217ENST00000490543 MARCH10Q8NA82 808 aaPredicted RBP13.1□□□□□ -0.31
SRRM1-217ENST00000490543 AXIN2Q9Y2T1 843 aa13.1□□□□□ -0.31
SRRM1-217ENST00000490543 SRPK2P78362 688 aaKnown RBP13.09□□□□□ -0.31
SRRM1-217ENST00000490543 PPP1R15BQ5SWA1 713 aa13.09□□□□□ -0.31
SRRM1-217ENST00000490543 PPIP5K1Q6PFW1 1433 aa13.09□□□□□ -0.31
SRRM1-217ENST00000490543 TOM1L2Q6ZVM7 507 aa13.09□□□□□ -0.31
SRRM1-217ENST00000490543 SBF2Q86WG5 1849 aa13.09□□□□□ -0.31
SRRM1-217ENST00000490543 CASZ1Q86V15 1759 aa13.08□□□□□ -0.32
SRRM1-217ENST00000490543 ZNF784Q8NCA9 323 aaPredicted RBP13.08□□□□□ -0.32
SRRM1-217ENST00000490543 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
SRRM1-217ENST00000490543 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
SRRM1-217ENST00000490543 CABP1Q9NZU7 370 aa13.07□□□□□ -0.32
SRRM1-217ENST00000490543 LRRC37A3O60309 1634 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms