RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 TXNRD1Q16881 649 aa14.3□□□□□ -0.12
RBM39-236ENST00000490484 PROM2Q8N271 834 aa14.29□□□□□ -0.12
RBM39-236ENST00000490484 CASZ1Q86V15 1759 aa14.29□□□□□ -0.12
RBM39-236ENST00000490484 PAPPAQ13219 1627 aa14.28□□□□□ -0.12
RBM39-236ENST00000490484 ZCRB1Q8TBF4 217 aaKnown RBP14.28□□□□□ -0.12
RBM39-236ENST00000490484 RAPGEF4Q8WZA2 1011 aa14.28□□□□□ -0.12
RBM39-236ENST00000490484 PANK3Q9H999 370 aa14.28□□□□□ -0.12
RBM39-236ENST00000490484 MAP2P11137 1827 aaKnown RBP14.27□□□□□ -0.12
RBM39-236ENST00000490484 TNNT2P45379 298 aaPredicted RBP14.27□□□□□ -0.13
RBM39-236ENST00000490484 SYTL4Q96C24 671 aaPredicted RBP14.27□□□□□ -0.13
RBM39-236ENST00000490484 KAT6BQ8WYB5 2073 aa14.27□□□□□ -0.13
RBM39-236ENST00000490484 PKD1L3Q7Z443 1732 aa14.25□□□□□ -0.13
RBM39-236ENST00000490484 TATP17735 454 aaPredicted RBP14.25□□□□□ -0.13
RBM39-236ENST00000490484 STK32BQ9NY57 414 aa14.25□□□□□ -0.13
RBM39-236ENST00000490484 NSD2O96028 1365 aa14.24□□□□□ -0.13
RBM39-236ENST00000490484 WASHC2AQ641Q2 1341 aa14.24□□□□□ -0.13
RBM39-236ENST00000490484 PCDH11XQ9BZA7 1347 aa14.24□□□□□ -0.13
RBM39-236ENST00000490484 PCDH11YQ9BZA8 1340 aa14.24□□□□□ -0.13
RBM39-236ENST00000490484 POLKQ9UBT6 870 aa14.24□□□□□ -0.13
RBM39-236ENST00000490484 NCAPD2Q15021 1401 aa14.24□□□□□ -0.13
RBM39-236ENST00000490484 PRIM1P49642 420 aaKnown RBP14.23□□□□□ -0.13
RBM39-236ENST00000490484 PDGFDQ9GZP0 370 aaPredicted RBP14.23□□□□□ -0.13
RBM39-236ENST00000490484 KIF7Q2M1P5 1343 aa14.22□□□□□ -0.13
RBM39-236ENST00000490484 TOGARAM1Q9Y4F4 1720 aa14.22□□□□□ -0.13
RBM39-236ENST00000490484 SLC15A2Q16348 729 aa14.22□□□□□ -0.13
RBM39-236ENST00000490484 SPON1Q9HCB6 807 aa14.22□□□□□ -0.13
RBM39-236ENST00000490484 LY75O60449 1722 aa14.21□□□□□ -0.13
RBM39-236ENST00000490484 PPP1R1BQ9UD71 204 aaPredicted RBP14.21□□□□□ -0.13
RBM39-236ENST00000490484 ZBTB7AO95365 584 aa14.2□□□□□ -0.14
RBM39-236ENST00000490484 ZNF827Q17R98 1081 aa14.2□□□□□ -0.14
RBM39-236ENST00000490484 EYA1Q99502 592 aa14.2□□□□□ -0.14
RBM39-236ENST00000490484 LRRC4BQ9NT99 713 aa14.2□□□□□ -0.14
RBM39-236ENST00000490484 EIF4A2Q14240 407 aaKnown RBP14.19□□□□□ -0.14
RBM39-236ENST00000490484 KNSTRNQ9Y448 316 aa14.19□□□□□ -0.14
RBM39-236ENST00000490484 CYP27B1O15528 508 aa14.18□□□□□ -0.14
RBM39-236ENST00000490484 KCNQ4P56696 695 aa14.18□□□□□ -0.14
RBM39-236ENST00000490484 SLC27A3Q5K4L6 730 aa14.18□□□□□ -0.14
RBM39-236ENST00000490484 MORC1Q86VD1 984 aa14.18□□□□□ -0.14
RBM39-236ENST00000490484 TUBGCP6Q96RT7 1819 aa14.17□□□□□ -0.14
RBM39-236ENST00000490484 QSER1Q2KHR3 1735 aa14.16□□□□□ -0.14
RBM39-236ENST00000490484 ITGB4P16144 1822 aa14.16□□□□□ -0.14
RBM39-236ENST00000490484 CCNL1Q9UK58 526 aaPredicted RBP14.16□□□□□ -0.14
RBM39-236ENST00000490484 SPG7Q9UQ90 795 aa14.16□□□□□ -0.14
RBM39-236ENST00000490484 ATF5Q9Y2D1 282 aaPredicted RBP14.16□□□□□ -0.14
RBM39-236ENST00000490484 IGSF1Q8N6C5 1336 aa14.15□□□□□ -0.14
RBM39-236ENST00000490484 C5P01031 1676 aa14.15□□□□□ -0.14
RBM39-236ENST00000490484 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
RBM39-236ENST00000490484 MPRIPQ6WCQ1 1025 aa14.15□□□□□ -0.14
RBM39-236ENST00000490484 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
RBM39-236ENST00000490484 PALLDQ8WX93 1383 aa14.14□□□□□ -0.15
RBM39-236ENST00000490484 PTGER2P43116 358 aa14.14□□□□□ -0.15
RBM39-236ENST00000490484 MTFR1LQ9H019 292 aa14.14□□□□□ -0.15
RBM39-236ENST00000490484 PLEKHG2Q9H7P9 1386 aa14.12□□□□□ -0.15
RBM39-236ENST00000490484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.12□□□□□ -0.152e-28■■□□□ 12.6
RBM39-236ENST00000490484 TFCP2L1Q9NZI6 479 aa14.12□□□□□ -0.15
RBM39-236ENST00000490484 PNPLA7Q6ZV29 1317 aa14.12□□□□□ -0.15
RBM39-236ENST00000490484 PHKG2P15735 406 aa14.11□□□□□ -0.15
RBM39-236ENST00000490484 NKX1-1Q15270 411 aaPredicted RBP14.11□□□□□ -0.15
RBM39-236ENST00000490484 CC2D1BQ5T0F9 858 aaKnown RBP14.11□□□□□ -0.15
RBM39-236ENST00000490484 AEBP1Q8IUX7 1158 aa14.11□□□□□ -0.15
RBM39-236ENST00000490484 TAF1LQ8IZX4 1826 aa14.11□□□□□ -0.15
RBM39-236ENST00000490484 IFNL2Q8IZJ0 200 aa14.1□□□□□ -0.15
RBM39-236ENST00000490484 TMOD3Q9NYL9 352 aa14.1□□□□□ -0.15
RBM39-236ENST00000490484 C4BP0C0L5 1744 aa14.1□□□□□ -0.15
RBM39-236ENST00000490484 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
RBM39-236ENST00000490484 PIGBQ92521 554 aa14.09□□□□□ -0.15
RBM39-236ENST00000490484 SGIP1Q9BQI5 828 aa14.09□□□□□ -0.15
RBM39-236ENST00000490484 PER1O15534 1290 aaPredicted RBP14.08□□□□□ -0.16
RBM39-236ENST00000490484 SMARCC1Q92922 1105 aaPredicted RBP14.08□□□□□ -0.16
RBM39-236ENST00000490484 FHDC1Q9C0D6 1143 aaPredicted RBP14.08□□□□□ -0.16
RBM39-236ENST00000490484 UTRNP46939 3433 aa14.08□□□□□ -0.16
RBM39-236ENST00000490484 KDRP35968 1356 aa14.08□□□□□ -0.16
RBM39-236ENST00000490484 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
RBM39-236ENST00000490484 IL13P35225 146 aa14.07□□□□□ -0.16
RBM39-236ENST00000490484 MTHFSP49914 203 aa14.07□□□□□ -0.16
RBM39-236ENST00000490484 SULT6B1Q6IMI4 303 aa14.07□□□□□ -0.16
RBM39-236ENST00000490484 ZNF530Q6P9A1 599 aaPredicted RBP14.07□□□□□ -0.16
RBM39-236ENST00000490484 COL24A1Q17RW2 1714 aa14.07□□□□□ -0.16
RBM39-236ENST00000490484 MSH5O43196 834 aa14.06□□□□□ -0.16
RBM39-236ENST00000490484 PLEKHO1Q53GL0 409 aaPredicted RBP14.06□□□□□ -0.16
RBM39-236ENST00000490484 ARXQ96QS3 562 aa14.06□□□□□ -0.16
RBM39-236ENST00000490484 AMOTQ4VCS5 1084 aa14.05□□□□□ -0.16
RBM39-236ENST00000490484 COL23A1Q86Y22 540 aaPredicted RBP14.05□□□□□ -0.16
RBM39-236ENST00000490484 SLC16A10Q8TF71 515 aa14.05□□□□□ -0.16
RBM39-236ENST00000490484 ASAP1Q9ULH1 1129 aa14.05□□□□□ -0.16
RBM39-236ENST00000490484 NPC1L1Q9UHC9 1359 aa14.05□□□□□ -0.16
RBM39-236ENST00000490484 GOLGB1Q14789 3259 aaKnown RBP14.04□□□□□ -0.16
RBM39-236ENST00000490484 LOC102724428A0A0B4J2F2 783 aa14.04□□□□□ -0.16
RBM39-236ENST00000490484 HSP90AB1P08238 724 aaKnown RBP14.04□□□□□ -0.16
RBM39-236ENST00000490484 POLD1P28340 1107 aa14.04□□□□□ -0.16
RBM39-236ENST00000490484 SIK1P57059 783 aa14.04□□□□□ -0.16
RBM39-236ENST00000490484 C1orf141Q5JVX7 400 aa14.04□□□□□ -0.16
RBM39-236ENST00000490484 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
RBM39-236ENST00000490484 DCAF5Q96JK2 942 aa14.04□□□□□ -0.16
RBM39-236ENST00000490484 AK7Q96M32 723 aa14.04□□□□□ -0.16
RBM39-236ENST00000490484 SYT17Q9BSW7 474 aa14.04□□□□□ -0.16
RBM39-236ENST00000490484 COL3A1P02461 1466 aaPredicted RBP14.04□□□□□ -0.16
RBM39-236ENST00000490484 UBR3Q6ZT12 1888 aa14.04□□□□□ -0.16
RBM39-236ENST00000490484 DCAF8L1A6NGE4 600 aa14.03□□□□□ -0.16
RBM39-236ENST00000490484 HMOX1P09601 288 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms