RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SYTL4Q96C24 671 aaPredicted RBP14.31□□□□□ -0.12
TTC28-207ENST00000490475 QSER1Q2KHR3 1735 aa14.31□□□□□ -0.12
TTC28-207ENST00000490475 PCDH11XQ9BZA7 1347 aa14.31□□□□□ -0.12
TTC28-207ENST00000490475 PCDH11YQ9BZA8 1340 aa14.31□□□□□ -0.12
TTC28-207ENST00000490475 RGPD2P0DJD1 1756 aa14.3□□□□□ -0.12
TTC28-207ENST00000490475 HSPA5P11021 654 aaKnown RBP14.3□□□□□ -0.12
TTC28-207ENST00000490475 YY1P25490 414 aa14.3□□□□□ -0.12
TTC28-207ENST00000490475 PTGER2P43116 358 aa14.3□□□□□ -0.12
TTC28-207ENST00000490475 PRIM1P49642 420 aaKnown RBP14.3□□□□□ -0.12
TTC28-207ENST00000490475 NBPF6Q5VWK0 638 aa14.3□□□□□ -0.12
TTC28-207ENST00000490475 NBPF4Q96M43 638 aa14.3□□□□□ -0.12
TTC28-207ENST00000490475 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
TTC28-207ENST00000490475 DOT1LQ8TEK3 1739 aa14.29□□□□□ -0.12
TTC28-207ENST00000490475 EIF4G2P78344 907 aaKnown RBP eCLIP14.29□□□□□ -0.12
TTC28-207ENST00000490475 NSD3Q9BZ95 1437 aa14.29□□□□□ -0.12
TTC28-207ENST00000490475 MEGF6O75095 1541 aa14.29□□□□□ -0.12
TTC28-207ENST00000490475 MYOM1P52179 1685 aa14.29□□□□□ -0.12
TTC28-207ENST00000490475 LY75O60449 1722 aa14.28□□□□□ -0.12
TTC28-207ENST00000490475 NSD2O96028 1365 aa14.28□□□□□ -0.12
TTC28-207ENST00000490475 FBLN1P23142 703 aa14.28□□□□□ -0.12
TTC28-207ENST00000490475 MAP3K5Q99683 1374 aa14.28□□□□□ -0.12
TTC28-207ENST00000490475 SHANK3Q9BYB0 1731 aa14.28□□□□□ -0.12
TTC28-207ENST00000490475 PDGFDQ9GZP0 370 aaPredicted RBP14.28□□□□□ -0.12
TTC28-207ENST00000490475 LRRC4BQ9NT99 713 aa14.28□□□□□ -0.12
TTC28-207ENST00000490475 POLD1P28340 1107 aa14.27□□□□□ -0.13
TTC28-207ENST00000490475 HSP90AB2PQ58FF8 381 aa14.27□□□□□ -0.13
TTC28-207ENST00000490475 AKT1S1Q96B36 256 aa14.27□□□□□ -0.13
TTC28-207ENST00000490475 ARXQ96QS3 562 aa14.27□□□□□ -0.13
TTC28-207ENST00000490475 TFCP2L1Q9NZI6 479 aa14.27□□□□□ -0.13
TTC28-207ENST00000490475 PLEKHG2Q9H7P9 1386 aa14.26□□□□□ -0.13
TTC28-207ENST00000490475 SGIP1Q9BQI5 828 aa14.26□□□□□ -0.13
TTC28-207ENST00000490475 SYT17Q9BSW7 474 aa14.26□□□□□ -0.13
TTC28-207ENST00000490475 CARD14Q9BXL6 1004 aa14.26□□□□□ -0.13
TTC28-207ENST00000490475 CCNL1Q9UK58 526 aaPredicted RBP14.26□□□□□ -0.13
TTC28-207ENST00000490475 MAP2P11137 1827 aaKnown RBP14.25□□□□□ -0.13
TTC28-207ENST00000490475 WASHC2AQ641Q2 1341 aa14.25□□□□□ -0.13
TTC28-207ENST00000490475 ANKRD26Q9UPS8 1709 aa14.25□□□□□ -0.13
TTC28-207ENST00000490475 ZNF827Q17R98 1081 aa14.25□□□□□ -0.13
TTC28-207ENST00000490475 SMARCC1Q92922 1105 aaPredicted RBP14.25□□□□□ -0.13
TTC28-207ENST00000490475 FHDC1Q9C0D6 1143 aaPredicted RBP14.25□□□□□ -0.13
TTC28-207ENST00000490475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.25□□□□□ -0.135e-7■■■□□ 18.4
TTC28-207ENST00000490475 SPG7Q9UQ90 795 aa14.25□□□□□ -0.13
TTC28-207ENST00000490475 USHBP1Q8N6Y0 703 aa14.24□□□□□ -0.13
TTC28-207ENST00000490475 FLAD1Q8NFF5 587 aa14.24□□□□□ -0.13
TTC28-207ENST00000490475 PPM1GO15355 546 aaPredicted RBP14.23□□□□□ -0.13
TTC28-207ENST00000490475 EMILIN1Q9Y6C2 1016 aa14.23□□□□□ -0.13
TTC28-207ENST00000490475 NCAPD2Q15021 1401 aa14.23□□□□□ -0.13
TTC28-207ENST00000490475 PKD1L3Q7Z443 1732 aa14.22□□□□□ -0.13
TTC28-207ENST00000490475 POLR3GLQ9BT43 218 aa14.22□□□□□ -0.13
TTC28-207ENST00000490475 CHD4Q14839 1912 aa14.21□□□□□ -0.13
TTC28-207ENST00000490475 COL24A1Q17RW2 1714 aa14.21□□□□□ -0.13
TTC28-207ENST00000490475 PNPLA7Q6ZV29 1317 aa14.21□□□□□ -0.13
TTC28-207ENST00000490475 NKX1-1Q15270 411 aaPredicted RBP14.2□□□□□ -0.14
TTC28-207ENST00000490475 PALLDQ8WX93 1383 aa14.2□□□□□ -0.14
TTC28-207ENST00000490475 CYP27B1O15528 508 aa14.19□□□□□ -0.14
TTC28-207ENST00000490475 MPRIPQ6WCQ1 1025 aa14.19□□□□□ -0.14
TTC28-207ENST00000490475 POLKQ9UBT6 870 aa14.19□□□□□ -0.14
TTC28-207ENST00000490475 ITGB4P16144 1822 aa14.18□□□□□ -0.14
TTC28-207ENST00000490475 TUBGCP6Q96RT7 1819 aa14.18□□□□□ -0.14
TTC28-207ENST00000490475 C5P01031 1676 aa14.18□□□□□ -0.14
TTC28-207ENST00000490475 MSH5O43196 834 aa14.18□□□□□ -0.14
TTC28-207ENST00000490475 IFNL2Q8IZJ0 200 aa14.18□□□□□ -0.14
TTC28-207ENST00000490475 EYA1Q99502 592 aa14.18□□□□□ -0.14
TTC28-207ENST00000490475 HSP90AB1P08238 724 aaKnown RBP14.17□□□□□ -0.14
TTC28-207ENST00000490475 TAF1LQ8IZX4 1826 aa14.17□□□□□ -0.14
TTC28-207ENST00000490475 KCNQ4P56696 695 aa14.16□□□□□ -0.14
TTC28-207ENST00000490475 GPR162Q16538 588 aa14.16□□□□□ -0.14
TTC28-207ENST00000490475 TMOD3Q9NYL9 352 aa14.16□□□□□ -0.14
TTC28-207ENST00000490475 AK7Q96M32 723 aa14.15□□□□□ -0.14
TTC28-207ENST00000490475 PANK3Q9H999 370 aa14.15□□□□□ -0.14
TTC28-207ENST00000490475 EIF4A2Q14240 407 aaKnown RBP14.14□□□□□ -0.15
TTC28-207ENST00000490475 AMOTQ4VCS5 1084 aa14.14□□□□□ -0.15
TTC28-207ENST00000490475 COL23A1Q86Y22 540 aaPredicted RBP14.14□□□□□ -0.15
TTC28-207ENST00000490475 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
TTC28-207ENST00000490475 PIGBQ92521 554 aa14.14□□□□□ -0.15
TTC28-207ENST00000490475 KNSTRNQ9Y448 316 aa14.14□□□□□ -0.15
TTC28-207ENST00000490475 GRIN3BO60391 1043 aa14.13□□□□□ -0.15
TTC28-207ENST00000490475 PHKG2P15735 406 aa14.13□□□□□ -0.15
TTC28-207ENST00000490475 IGSF1Q8N6C5 1336 aa14.13□□□□□ -0.15
TTC28-207ENST00000490475 C4BP0C0L5 1744 aa14.12□□□□□ -0.15
TTC28-207ENST00000490475 TOGARAM1Q9Y4F4 1720 aa14.12□□□□□ -0.15
TTC28-207ENST00000490475 LOC102724428A0A0B4J2F2 783 aa14.12□□□□□ -0.15
TTC28-207ENST00000490475 ERVV-2B6SEH9 535 aa14.12□□□□□ -0.15
TTC28-207ENST00000490475 SSFA2P28290 1259 aa14.12□□□□□ -0.15
TTC28-207ENST00000490475 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
TTC28-207ENST00000490475 SIK1P57059 783 aa14.12□□□□□ -0.15
TTC28-207ENST00000490475 PLEKHO1Q53GL0 409 aaPredicted RBP14.12□□□□□ -0.15
TTC28-207ENST00000490475 MORC1Q86VD1 984 aa14.12□□□□□ -0.15
TTC28-207ENST00000490475 DCAF5Q96JK2 942 aa14.11□□□□□ -0.15
TTC28-207ENST00000490475 CD2APQ9Y5K6 639 aa14.11□□□□□ -0.15
TTC28-207ENST00000490475 KIF7Q2M1P5 1343 aa14.11□□□□□ -0.15
TTC28-207ENST00000490475 ZNF784Q8NCA9 323 aaPredicted RBP14.1□□□□□ -0.15
TTC28-207ENST00000490475 UBR3Q6ZT12 1888 aa14.09□□□□□ -0.15
TTC28-207ENST00000490475 ZNF831Q5JPB2 1677 aa14.08□□□□□ -0.16
TTC28-207ENST00000490475 ATP6V1AP38606 617 aa14.08□□□□□ -0.16
TTC28-207ENST00000490475 C1orf141Q5JVX7 400 aa14.08□□□□□ -0.16
TTC28-207ENST00000490475 PELP1Q8IZL8 1130 aaKnown RBP14.08□□□□□ -0.16
TTC28-207ENST00000490475 UTRNP46939 3433 aa14.07□□□□□ -0.16
TTC28-207ENST00000490475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.07□□□□□ -0.16
TTC28-207ENST00000490475 ASAP1Q9ULH1 1129 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms