RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 ATP9BO43861 1147 aa8.87□□□□□ -0.99
PRPF4B-207ENST00000490399 BMP2P12643 396 aa8.87□□□□□ -0.99
PRPF4B-207ENST00000490399 LMOD1P29536 600 aaPredicted RBP8.87□□□□□ -0.99
PRPF4B-207ENST00000490399 OXLD1Q5BKU9 147 aa8.87□□□□□ -0.99
PRPF4B-207ENST00000490399 SEPT12Q8IYM1 358 aa8.87□□□□□ -0.99
PRPF4B-207ENST00000490399 LINC00528Q8N1L1 170 aa8.87□□□□□ -0.99
PRPF4B-207ENST00000490399 SERPINA10Q9UK55 444 aa8.87□□□□□ -0.99
PRPF4B-207ENST00000490399 CHIC2Q9UKJ5 165 aa8.87□□□□□ -0.99
PRPF4B-207ENST00000490399 DOLKQ9UPQ8 538 aa8.87□□□□□ -0.99
PRPF4B-207ENST00000490399 EMILIN1Q9Y6C2 1016 aa8.87□□□□□ -0.99
PRPF4B-207ENST00000490399 SCTRP47872 440 aa8.86□□□□□ -0.99
PRPF4B-207ENST00000490399 CFAP70Q5T0N1 1121 aa8.86□□□□□ -0.99
PRPF4B-207ENST00000490399 CYLDQ9NQC7 956 aa8.86□□□□□ -0.99
PRPF4B-207ENST00000490399 USP17L5A8MUK1 530 aa8.85□□□□□ -0.99
PRPF4B-207ENST00000490399 UPP2O95045 317 aa8.85□□□□□ -0.99
PRPF4B-207ENST00000490399 ZNF784Q8NCA9 323 aaPredicted RBP8.85□□□□□ -0.99
PRPF4B-207ENST00000490399 MAFBQ9Y5Q3 323 aaPredicted RBP8.85□□□□□ -0.99
PRPF4B-207ENST00000490399 USP17L3A6NCW0 530 aa8.84□□□□□ -0.99
PRPF4B-207ENST00000490399 USP17L4A6NCW7 530 aa8.84□□□□□ -0.99
PRPF4B-207ENST00000490399 DHX9Q08211 1270 aaKnown RBP8.84□□□□□ -0.99
PRPF4B-207ENST00000490399 CBLBQ13191 982 aa8.84□□□□□ -0.99
PRPF4B-207ENST00000490399 NCOA4Q13772 614 aa8.84□□□□□ -0.99
PRPF4B-207ENST00000490399 CDCA8Q53HL2 280 aa8.84□□□□□ -0.99
PRPF4B-207ENST00000490399 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
PRPF4B-207ENST00000490399 USP17L1Q7RTZ2 530 aa8.84□□□□□ -0.99
PRPF4B-207ENST00000490399 NFATC2IPQ8NCF5 419 aa8.84□□□□□ -0.99
PRPF4B-207ENST00000490399 LILRA1O75019 489 aa8.83□□□□□ -1
PRPF4B-207ENST00000490399 SLC16A10Q8TF71 515 aa8.83□□□□□ -1
PRPF4B-207ENST00000490399 WIPF1O43516 503 aa8.82□□□□□ -1
PRPF4B-207ENST00000490399 MAN1A2O60476 641 aa8.82□□□□□ -1
PRPF4B-207ENST00000490399 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
PRPF4B-207ENST00000490399 MAP7D1Q3KQU3 841 aa8.82□□□□□ -1
PRPF4B-207ENST00000490399 PGPEP1Q9NXJ5 209 aa8.82□□□□□ -1
PRPF4B-207ENST00000490399 H3BM21 787 aa8.81□□□□□ -1
PRPF4B-207ENST00000490399 TSEN34Q9BSV6 310 aaKnown RBP8.81□□□□□ -1
PRPF4B-207ENST00000490399 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.8□□□□□ -1
PRPF4B-207ENST00000490399 ERVK-9P63128 1117 aa8.8□□□□□ -1
PRPF4B-207ENST00000490399 EML3Q32P44 896 aa8.8□□□□□ -1
PRPF4B-207ENST00000490399 NPAS3Q8IXF0 933 aa8.8□□□□□ -1
PRPF4B-207ENST00000490399 MKRN1Q9UHC7 482 aaKnown RBP8.8□□□□□ -1
PRPF4B-207ENST00000490399 DNMT3LQ9UJW3 386 aa8.8□□□□□ -1
PRPF4B-207ENST00000490399 SOS2Q07890 1332 aaPredicted RBP8.8□□□□□ -1
PRPF4B-207ENST00000490399 GMPRP36959 345 aa8.79□□□□□ -1
PRPF4B-207ENST00000490399 CC2D2BQ6DHV5 1058 aa8.79□□□□□ -1
PRPF4B-207ENST00000490399 Q6ZVU0 165 aa8.79□□□□□ -1
PRPF4B-207ENST00000490399 CCDC125Q86Z20 511 aa8.79□□□□□ -1
PRPF4B-207ENST00000490399 PLEKHM2Q8IWE5 1019 aa8.79□□□□□ -1
PRPF4B-207ENST00000490399 IRF7Q92985 503 aa8.79□□□□□ -1
PRPF4B-207ENST00000490399 AGBL1Q96MI9 1066 aa8.79□□□□□ -1
PRPF4B-207ENST00000490399 ERBB4Q15303 1308 aa8.79□□□□□ -1
PRPF4B-207ENST00000490399 STAU1O95793 577 aaKnown RBP8.78□□□□□ -1
PRPF4B-207ENST00000490399 USP4Q13107 963 aa8.78□□□□□ -1
PRPF4B-207ENST00000490399 OSBPL3Q9H4L5 887 aa8.78□□□□□ -1
PRPF4B-207ENST00000490399 MYCP01106 439 aaPredicted RBP8.77□□□□□ -1.01
PRPF4B-207ENST00000490399 KANK4Q5T7N3 995 aaPredicted RBP8.77□□□□□ -1.01
PRPF4B-207ENST00000490399 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
PRPF4B-207ENST00000490399 VRTNQ9H8Y1 702 aa8.77□□□□□ -1.01
PRPF4B-207ENST00000490399 NOD1Q9Y239 953 aa8.77□□□□□ -1.01
PRPF4B-207ENST00000490399 TTLL8A6PVC2 850 aa8.76□□□□□ -1.01
PRPF4B-207ENST00000490399 GTF2IP78347 998 aa8.76□□□□□ -1.01
PRPF4B-207ENST00000490399 SRPK2P78362 688 aaKnown RBP8.76□□□□□ -1.01
PRPF4B-207ENST00000490399 CLDN10P78369 228 aa8.76□□□□□ -1.01
PRPF4B-207ENST00000490399 INSM1Q01101 510 aaPredicted RBP8.76□□□□□ -1.01
PRPF4B-207ENST00000490399 RELBQ01201 579 aa8.76□□□□□ -1.01
PRPF4B-207ENST00000490399 PCDHGA11Q9Y5H2 935 aa8.76□□□□□ -1.01
PRPF4B-207ENST00000490399 LZTS3O60299 673 aaPredicted RBP8.75□□□□□ -1.01
PRPF4B-207ENST00000490399 RASA1P20936 1047 aa8.75□□□□□ -1.01
PRPF4B-207ENST00000490399 KDF1Q8NAX2 398 aaPredicted RBP8.75□□□□□ -1.01
PRPF4B-207ENST00000490399 KIAA1024Q9UPX6 916 aa8.75□□□□□ -1.01
PRPF4B-207ENST00000490399 FIGNL2A6NMB9 653 aa8.74□□□□□ -1.01
PRPF4B-207ENST00000490399 SPINT1O43278 529 aa8.74□□□□□ -1.01
PRPF4B-207ENST00000490399 ADH1AP07327 375 aa8.74□□□□□ -1.01
PRPF4B-207ENST00000490399 CRTC2Q53ET0 693 aaPredicted RBP8.74□□□□□ -1.01
PRPF4B-207ENST00000490399 OGFOD1Q8N543 542 aa8.74□□□□□ -1.01
PRPF4B-207ENST00000490399 SIRT1Q96EB6 747 aa8.74□□□□□ -1.01
PRPF4B-207ENST00000490399 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
PRPF4B-207ENST00000490399 ZNF395Q9H8N7 513 aaPredicted RBP8.74□□□□□ -1.01
PRPF4B-207ENST00000490399 RAB6BQ9NRW1 208 aa8.74□□□□□ -1.01
PRPF4B-207ENST00000490399 ATP5J2-PTCD1G3V325 749 aa8.73□□□□□ -1.01
PRPF4B-207ENST00000490399 PBXIP1Q96AQ6 731 aa8.73□□□□□ -1.01
PRPF4B-207ENST00000490399 DNAAF2Q9NVR5 837 aaKnown RBP8.73□□□□□ -1.01
PRPF4B-207ENST00000490399 ZBTB7BO15156 539 aaPredicted RBP8.72□□□□□ -1.01
PRPF4B-207ENST00000490399 PPFIA3O75145 1194 aa8.72□□□□□ -1.01
PRPF4B-207ENST00000490399 CTSOP43234 321 aaPredicted RBP8.72□□□□□ -1.01
PRPF4B-207ENST00000490399 PSME1Q06323 249 aa8.72□□□□□ -1.01
PRPF4B-207ENST00000490399 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.72□□□□□ -1.012e-13■□□□□ 11
PRPF4B-207ENST00000490399 INSM2Q96T92 566 aaPredicted RBP8.72□□□□□ -1.01
PRPF4B-207ENST00000490399 ARHGEF10LQ9HCE6 1279 aa8.72□□□□□ -1.01
PRPF4B-207ENST00000490399 CYP2U1Q7Z449 544 aa8.71□□□□□ -1.02
PRPF4B-207ENST00000490399 TRIM50Q86XT4 487 aa8.71□□□□□ -1.02
PRPF4B-207ENST00000490399 STK17AQ9UEE5 414 aa8.71□□□□□ -1.02
PRPF4B-207ENST00000490399 USP17L15C9J2P7 530 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 USP17L10C9JJH3 530 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 USP17L13C9JLJ4 530 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 USP17L12C9JPN9 530 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 USP17L11C9JVI0 530 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 USP17L21D6R901 530 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 USP17L18D6R9N7 530 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 USP17L22D6RA61 530 aa8.7□□□□□ -1.02
PRPF4B-207ENST00000490399 USP17L17D6RBQ6 530 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms