RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 TWISTNBQ3B726 338 aaPredicted RBP17.41■□□□□ 0.38
RIPPLY3-203ENST00000490393 MCM10Q7L590 875 aa17.41■□□□□ 0.38
RIPPLY3-203ENST00000490393 MRPL50Q8N5N7 158 aaKnown RBP17.41■□□□□ 0.38
RIPPLY3-203ENST00000490393 TNNQ9UQP3 1299 aa17.41■□□□□ 0.38
RIPPLY3-203ENST00000490393 C8orf58Q8NAV2 365 aa17.41■□□□□ 0.38
RIPPLY3-203ENST00000490393 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
RIPPLY3-203ENST00000490393 NCAPD2Q15021 1401 aa17.41■□□□□ 0.38
RIPPLY3-203ENST00000490393 NBPF6Q5VWK0 638 aa17.4■□□□□ 0.38
RIPPLY3-203ENST00000490393 NBPF4Q96M43 638 aa17.4■□□□□ 0.38
RIPPLY3-203ENST00000490393 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.38
RIPPLY3-203ENST00000490393 FTSJ3Q8IY81 847 aaKnown RBP17.39■□□□□ 0.38
RIPPLY3-203ENST00000490393 BABAM1Q9NWV8 329 aa17.39■□□□□ 0.38
RIPPLY3-203ENST00000490393 LMOD2Q6P5Q4 547 aa17.39■□□□□ 0.37
RIPPLY3-203ENST00000490393 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
RIPPLY3-203ENST00000490393 MED1Q15648 1581 aaPredicted RBP17.37■□□□□ 0.37
RIPPLY3-203ENST00000490393 PXDNQ92626 1479 aa17.37■□□□□ 0.37
RIPPLY3-203ENST00000490393 SPATA31A3Q5VYP0 1347 aa17.37■□□□□ 0.37
RIPPLY3-203ENST00000490393 IGHDP01880 384 aa17.36■□□□□ 0.37
RIPPLY3-203ENST00000490393 ZNF335Q9H4Z2 1342 aaPredicted RBP17.36■□□□□ 0.37
RIPPLY3-203ENST00000490393 MAP3K5Q99683 1374 aa17.36■□□□□ 0.37
RIPPLY3-203ENST00000490393 TNS3Q68CZ2 1445 aa17.36■□□□□ 0.37
RIPPLY3-203ENST00000490393 LRRC37A3O60309 1634 aa17.35■□□□□ 0.37
RIPPLY3-203ENST00000490393 ELL2O00472 640 aaPredicted RBP17.35■□□□□ 0.37
RIPPLY3-203ENST00000490393 BRINP3Q76B58 766 aa17.35■□□□□ 0.37
RIPPLY3-203ENST00000490393 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
RIPPLY3-203ENST00000490393 ANKRD24Q8TF21 1146 aa17.35■□□□□ 0.37
RIPPLY3-203ENST00000490393 AXIN2Q9Y2T1 843 aa17.35■□□□□ 0.37
RIPPLY3-203ENST00000490393 PCDHB15Q9Y5E8 787 aa17.35■□□□□ 0.37
RIPPLY3-203ENST00000490393 DDX17Q92841 729 aaKnown RBP17.34■□□□□ 0.37
RIPPLY3-203ENST00000490393 SLAIN2Q9P270 581 aa17.34■□□□□ 0.37
RIPPLY3-203ENST00000490393 CAMTA1Q9Y6Y1 1673 aa17.34■□□□□ 0.37
RIPPLY3-203ENST00000490393 SOS1Q07889 1333 aaPredicted RBP17.33■□□□□ 0.37
RIPPLY3-203ENST00000490393 AMOTQ4VCS5 1084 aa17.33■□□□□ 0.37
RIPPLY3-203ENST00000490393 USHBP1Q8N6Y0 703 aa17.33■□□□□ 0.37
RIPPLY3-203ENST00000490393 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.36
RIPPLY3-203ENST00000490393 ABCC6O95255 1503 aa17.33■□□□□ 0.36
RIPPLY3-203ENST00000490393 PLEKHO1Q53GL0 409 aaPredicted RBP17.33■□□□□ 0.36
RIPPLY3-203ENST00000490393 TMEM57Q8N5G2 664 aa17.33■□□□□ 0.36
RIPPLY3-203ENST00000490393 CHMP4BQ9H444 224 aaKnown RBP17.33■□□□□ 0.36
RIPPLY3-203ENST00000490393 TSPYL4Q9UJ04 414 aa17.33■□□□□ 0.36
RIPPLY3-203ENST00000490393 CEMIPQ8WUJ3 1361 aa17.32■□□□□ 0.36
RIPPLY3-203ENST00000490393 ZBTB7CA1YPR0 619 aa17.32■□□□□ 0.36
RIPPLY3-203ENST00000490393 TAF7Q15545 349 aaPredicted RBP17.32■□□□□ 0.36
RIPPLY3-203ENST00000490393 API5Q9BZZ5 524 aaKnown RBP17.32■□□□□ 0.36
RIPPLY3-203ENST00000490393 RWDD1Q9H446 243 aaPredicted RBP17.32■□□□□ 0.36
RIPPLY3-203ENST00000490393 ZBTB40Q9NUA8 1239 aa17.32■□□□□ 0.36
RIPPLY3-203ENST00000490393 ITPRIPQ8IWB1 547 aa17.31■□□□□ 0.36
RIPPLY3-203ENST00000490393 LRRC59Q96AG4 307 aaKnown RBP17.31■□□□□ 0.36
RIPPLY3-203ENST00000490393 ABCC4O15439 1325 aa17.31■□□□□ 0.36
RIPPLY3-203ENST00000490393 SOS2Q07890 1332 aaPredicted RBP17.31■□□□□ 0.36
RIPPLY3-203ENST00000490393 AKAP4Q5JQC9 854 aa17.31■□□□□ 0.36
RIPPLY3-203ENST00000490393 COL18A1P39060 1754 aa17.31■□□□□ 0.36
RIPPLY3-203ENST00000490393 CPDO75976 1380 aa17.3■□□□□ 0.36
RIPPLY3-203ENST00000490393 ERBB3P21860 1342 aa17.3■□□□□ 0.36
RIPPLY3-203ENST00000490393 ZC3H6P61129 1189 aaKnown RBP17.3■□□□□ 0.36
RIPPLY3-203ENST00000490393 CRYBG1Q9Y4K1 1723 aa17.29■□□□□ 0.36
RIPPLY3-203ENST00000490393 LMO7Q8WWI1 1683 aa17.29■□□□□ 0.36
RIPPLY3-203ENST00000490393 HDAC1Q13547 482 aaPredicted RBP17.29■□□□□ 0.36
RIPPLY3-203ENST00000490393 PLEKHG2Q9H7P9 1386 aa17.29■□□□□ 0.36
RIPPLY3-203ENST00000490393 RGPD5Q99666 1765 aa17.29■□□□□ 0.36
RIPPLY3-203ENST00000490393 KRT24Q2M2I5 525 aa17.29■□□□□ 0.36
RIPPLY3-203ENST00000490393 MIS18AQ9NYP9 233 aa17.29■□□□□ 0.36
RIPPLY3-203ENST00000490393 ZBTB7BO15156 539 aaPredicted RBP17.28■□□□□ 0.36
RIPPLY3-203ENST00000490393 PTPRCP08575 1304 aa17.27■□□□□ 0.35
RIPPLY3-203ENST00000490393 PDE4AP27815 886 aa17.27■□□□□ 0.35
RIPPLY3-203ENST00000490393 BACH2Q9BYV9 841 aa17.27■□□□□ 0.35
RIPPLY3-203ENST00000490393 OVOS2A0A0G2JMS6 1433 aa17.25■□□□□ 0.35
RIPPLY3-203ENST00000490393 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
RIPPLY3-203ENST00000490393 INTS3Q68E01 1043 aaKnown RBP17.24■□□□□ 0.35
RIPPLY3-203ENST00000490393 ZNF530Q6P9A1 599 aaPredicted RBP17.24■□□□□ 0.35
RIPPLY3-203ENST00000490393 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
RIPPLY3-203ENST00000490393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.24■□□□□ 0.35
RIPPLY3-203ENST00000490393 LGR6Q9HBX8 967 aa17.24■□□□□ 0.35
RIPPLY3-203ENST00000490393 CACNA1FO60840 1977 aa17.23■□□□□ 0.35
RIPPLY3-203ENST00000490393 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
RIPPLY3-203ENST00000490393 SLC4A2P04920 1241 aa17.23■□□□□ 0.35
RIPPLY3-203ENST00000490393 SKAP1Q86WV1 359 aa17.23■□□□□ 0.35
RIPPLY3-203ENST00000490393 C1orf141Q5JVX7 400 aa17.22■□□□□ 0.35
RIPPLY3-203ENST00000490393 CCDC30Q5VVM6 783 aa17.22■□□□□ 0.35
RIPPLY3-203ENST00000490393 CHMP4AQ9BY43 222 aa17.22■□□□□ 0.35
RIPPLY3-203ENST00000490393 RGS12O14924 1447 aa17.22■□□□□ 0.35
RIPPLY3-203ENST00000490393 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
RIPPLY3-203ENST00000490393 HOXB7P09629 217 aa17.21■□□□□ 0.35
RIPPLY3-203ENST00000490393 ADAMTS7Q9UKP4 1686 aa17.21■□□□□ 0.34
RIPPLY3-203ENST00000490393 SMC5Q8IY18 1101 aa17.2■□□□□ 0.34
RIPPLY3-203ENST00000490393 RAPGEF4Q8WZA2 1011 aa17.2■□□□□ 0.34
RIPPLY3-203ENST00000490393 NLRP2Q9NX02 1062 aa17.2■□□□□ 0.34
RIPPLY3-203ENST00000490393 NHSL1Q5SYE7 1610 aa17.2■□□□□ 0.34
RIPPLY3-203ENST00000490393 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
RIPPLY3-203ENST00000490393 EIF4A1P60842 406 aaKnown RBP17.19■□□□□ 0.34
RIPPLY3-203ENST00000490393 TEFQ10587 303 aa17.19■□□□□ 0.34
RIPPLY3-203ENST00000490393 STK31Q9BXU1 1019 aa17.19■□□□□ 0.34
RIPPLY3-203ENST00000490393 PDZRN3Q9UPQ7 1066 aa17.19■□□□□ 0.34
RIPPLY3-203ENST00000490393 KDM3BQ7LBC6 1761 aa17.19■□□□□ 0.34
RIPPLY3-203ENST00000490393 MPRIPQ6WCQ1 1025 aa17.18■□□□□ 0.34
RIPPLY3-203ENST00000490393 CHRNA2Q15822 529 aa17.18■□□□□ 0.34
RIPPLY3-203ENST00000490393 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
RIPPLY3-203ENST00000490393 SPG7Q9UQ90 795 aa17.18■□□□□ 0.34
RIPPLY3-203ENST00000490393 RGS3P49796 1198 aa17.17■□□□□ 0.34
RIPPLY3-203ENST00000490393 VIRMAQ69YN4 1812 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms