RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 FBLN1P23142 703 aa24.48■■□□□ 1.51
SRM-206ENST00000490101 GGNBP2Q9H3C7 697 aa24.48■■□□□ 1.51
SRM-206ENST00000490101 ANKRD26Q9UPS8 1709 aa24.48■■□□□ 1.51
SRM-206ENST00000490101 MAP3K19Q56UN5 1328 aa24.47■■□□□ 1.51
SRM-206ENST00000490101 PDGFDQ9GZP0 370 aaPredicted RBP24.47■■□□□ 1.51
SRM-206ENST00000490101 PPP2R1AP30153 589 aa24.46■■□□□ 1.51
SRM-206ENST00000490101 AMPHP49418 695 aa24.46■■□□□ 1.51
SRM-206ENST00000490101 STK32BQ9NY57 414 aa24.46■■□□□ 1.51
SRM-206ENST00000490101 CASZ1Q86V15 1759 aa24.46■■□□□ 1.51
SRM-206ENST00000490101 FAM208AQ9UK61 1670 aaKnown RBP24.45■■□□□ 1.5
SRM-206ENST00000490101 HOXC9P31274 260 aa24.44■■□□□ 1.5
SRM-206ENST00000490101 KAT6BQ8WYB5 2073 aa24.44■■□□□ 1.5
SRM-206ENST00000490101 ZBTB7AO95365 584 aa24.43■■□□□ 1.5
SRM-206ENST00000490101 CCDC184Q52MB2 194 aa24.43■■□□□ 1.5
SRM-206ENST00000490101 DDX54Q8TDD1 881 aaKnown RBP24.43■■□□□ 1.5
SRM-206ENST00000490101 MRS2Q9HD23 443 aa24.42■■□□□ 1.5
SRM-206ENST00000490101 BTAF1O14981 1849 aa24.42■■□□□ 1.5
SRM-206ENST00000490101 SLC15A2Q16348 729 aa24.41■■□□□ 1.5
SRM-206ENST00000490101 RRS1Q15050 365 aaKnown RBP24.4■■□□□ 1.5
SRM-206ENST00000490101 ATF5Q9Y2D1 282 aaPredicted RBP24.39■■□□□ 1.49
SRM-206ENST00000490101 RGPD2P0DJD1 1756 aa24.39■■□□□ 1.49
SRM-206ENST00000490101 TNNT2P45379 298 aaPredicted RBP24.36■■□□□ 1.49
SRM-206ENST00000490101 RTL1A6NKG5 1358 aa24.36■■□□□ 1.49
SRM-206ENST00000490101 SYTL4Q96C24 671 aaPredicted RBP24.35■■□□□ 1.49
SRM-206ENST00000490101 USHBP1Q8N6Y0 703 aa24.34■■□□□ 1.49
SRM-206ENST00000490101 MEGF6O75095 1541 aa24.34■■□□□ 1.49
SRM-206ENST00000490101 PAPPAQ13219 1627 aa24.33■■□□□ 1.49
SRM-206ENST00000490101 DCAF8L1A6NGE4 600 aa24.32■■□□□ 1.48
SRM-206ENST00000490101 PTGER2P43116 358 aa24.32■■□□□ 1.48
SRM-206ENST00000490101 NBPF6Q5VWK0 638 aa24.32■■□□□ 1.48
SRM-206ENST00000490101 ZCRB1Q8TBF4 217 aaKnown RBP24.32■■□□□ 1.48
SRM-206ENST00000490101 NBPF4Q96M43 638 aa24.32■■□□□ 1.48
SRM-206ENST00000490101 SMG6Q86US8 1419 aaKnown RBP24.32■■□□□ 1.48
SRM-206ENST00000490101 DOT1LQ8TEK3 1739 aa24.32■■□□□ 1.48
SRM-206ENST00000490101 PNISRQ8TF01 805 aaKnown RBP24.31■■□□□ 1.48
SRM-206ENST00000490101 LRRC4BQ9NT99 713 aa24.31■■□□□ 1.48
SRM-206ENST00000490101 SHANK3Q9BYB0 1731 aa24.3■■□□□ 1.48
SRM-206ENST00000490101 PRIM1P49642 420 aaKnown RBP24.3■■□□□ 1.48
SRM-206ENST00000490101 MTHFSP49914 203 aa24.3■■□□□ 1.48
SRM-206ENST00000490101 ZNF827Q17R98 1081 aa24.3■■□□□ 1.48
SRM-206ENST00000490101 MTFR1LQ9H019 292 aa24.29■■□□□ 1.48
SRM-206ENST00000490101 YY1P25490 414 aa24.28■■□□□ 1.48
SRM-206ENST00000490101 HSP90AB2PQ58FF8 381 aa24.28■■□□□ 1.48
SRM-206ENST00000490101 POLKQ9UBT6 870 aa24.28■■□□□ 1.48
SRM-206ENST00000490101 RAPGEF4Q8WZA2 1011 aa24.27■■□□□ 1.48
SRM-206ENST00000490101 KCNQ4P56696 695 aa24.26■■□□□ 1.47
SRM-206ENST00000490101 CFAP53Q96M91 514 aa24.26■■□□□ 1.47
SRM-206ENST00000490101 FLT4P35916 1363 aa24.26■■□□□ 1.47
SRM-206ENST00000490101 SLC27A3Q5K4L6 730 aa24.25■■□□□ 1.47
SRM-206ENST00000490101 INSRP06213 1382 aa24.25■■□□□ 1.47
SRM-206ENST00000490101 MAP2P11137 1827 aaKnown RBP24.24■■□□□ 1.47
SRM-206ENST00000490101 TATP17735 454 aaPredicted RBP24.24■■□□□ 1.47
SRM-206ENST00000490101 FHDC1Q9C0D6 1143 aaPredicted RBP24.24■■□□□ 1.47
SRM-206ENST00000490101 FAM9BQ8IZU0 186 aa24.23■■□□□ 1.47
SRM-206ENST00000490101 EMILIN1Q9Y6C2 1016 aa24.23■■□□□ 1.47
SRM-206ENST00000490101 AKT1S1Q96B36 256 aa24.22■■□□□ 1.47
SRM-206ENST00000490101 SGIP1Q9BQI5 828 aa24.22■■□□□ 1.47
SRM-206ENST00000490101 PPM1GO15355 546 aaPredicted RBP24.21■■□□□ 1.47
SRM-206ENST00000490101 KIF24Q5T7B8 1368 aa24.2■■□□□ 1.46
SRM-206ENST00000490101 ARXQ96QS3 562 aa24.2■■□□□ 1.46
SRM-206ENST00000490101 SYT17Q9BSW7 474 aa24.2■■□□□ 1.46
SRM-206ENST00000490101 COL3A1P02461 1466 aaPredicted RBP24.19■■□□□ 1.46
SRM-206ENST00000490101 LY75O60449 1722 aa24.19■■□□□ 1.46
SRM-206ENST00000490101 TFCP2L1Q9NZI6 479 aa24.19■■□□□ 1.46
SRM-206ENST00000490101 CCNL1Q9UK58 526 aaPredicted RBP24.18■■□□□ 1.46
SRM-206ENST00000490101 PNPLA7Q6ZV29 1317 aa24.17■■□□□ 1.46
SRM-206ENST00000490101 PCDH11XQ9BZA7 1347 aa24.17■■□□□ 1.46
SRM-206ENST00000490101 PCDH11YQ9BZA8 1340 aa24.17■■□□□ 1.46
SRM-206ENST00000490101 WDR43Q15061 677 aaKnown RBP eCLIP24.17■■□□□ 1.46
SRM-206ENST00000490101 UTRNP46939 3433 aa24.17■■□□□ 1.46
SRM-206ENST00000490101 TUBGCP6Q96RT7 1819 aa24.17■■□□□ 1.46
SRM-206ENST00000490101 QSER1Q2KHR3 1735 aa24.16■■□□□ 1.46
SRM-206ENST00000490101 KLHL34Q8N239 644 aa24.15■■□□□ 1.46
SRM-206ENST00000490101 DIAPH1O60610 1272 aaKnown RBP24.13■■□□□ 1.45
SRM-206ENST00000490101 SLC16A10Q8TF71 515 aa24.13■■□□□ 1.45
SRM-206ENST00000490101 YTHDC1Q96MU7 727 aaKnown RBP24.13■■□□□ 1.45
SRM-206ENST00000490101 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
SRM-206ENST00000490101 NUDCQ9Y266 331 aa24.13■■□□□ 1.45
SRM-206ENST00000490101 CYP27B1O15528 508 aa24.12■■□□□ 1.45
SRM-206ENST00000490101 MSH5O43196 834 aa24.12■■□□□ 1.45
SRM-206ENST00000490101 MPRIPQ6WCQ1 1025 aa24.12■■□□□ 1.45
SRM-206ENST00000490101 POLD1P28340 1107 aa24.11■■□□□ 1.45
SRM-206ENST00000490101 PKD1L3Q7Z443 1732 aa24.1■■□□□ 1.45
SRM-206ENST00000490101 TOGARAM1Q9Y4F4 1720 aa24.09■■□□□ 1.45
SRM-206ENST00000490101 PALLDQ8WX93 1383 aa24.08■■□□□ 1.45
SRM-206ENST00000490101 IL13P35225 146 aa24.08■■□□□ 1.45
SRM-206ENST00000490101 MAP3K5Q99683 1374 aa24.07■■□□□ 1.44
SRM-206ENST00000490101 EYA1Q99502 592 aa24.07■■□□□ 1.44
SRM-206ENST00000490101 C5P01031 1676 aa24.07■■□□□ 1.44
SRM-206ENST00000490101 NCAPD2Q15021 1401 aa24.07■■□□□ 1.44
SRM-206ENST00000490101 SPG7Q9UQ90 795 aa24.06■■□□□ 1.44
SRM-206ENST00000490101 ITGB4P16144 1822 aa24.05■■□□□ 1.44
SRM-206ENST00000490101 COL23A1Q86Y22 540 aaPredicted RBP24.05■■□□□ 1.44
SRM-206ENST00000490101 COL24A1Q17RW2 1714 aa24.04■■□□□ 1.44
SRM-206ENST00000490101 U2AF1L5P0DN76 240 aaPredicted RBP24.04■■□□□ 1.44
SRM-206ENST00000490101 HNRNPUQ00839 825 aaKnown RBP eCLIP24.04■■□□□ 1.44
SRM-206ENST00000490101 U2AF1Q01081 240 aaKnown RBP eCLIP24.04■■□□□ 1.44
SRM-206ENST00000490101 EIF4A2Q14240 407 aaKnown RBP24.04■■□□□ 1.44
SRM-206ENST00000490101 U2SURPO15042 1029 aaKnown RBP24.03■■□□□ 1.44
SRM-206ENST00000490101 MSL1Q68DK7 614 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms