RNA–Protein interactions for RNA: ENST00000490006.6

LINC01140-207, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 1,389 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-207ENST00000490006 SPATA31A5Q5VU36 1347 aa14.1□□□□□ -0.15
LINC01140-207ENST00000490006 SPATA31A7Q8IWB4 1347 aa14.1□□□□□ -0.15
LINC01140-207ENST00000490006 PLCH1Q4KWH8 1693 aa14.09□□□□□ -0.15
LINC01140-207ENST00000490006 RAPGEF4Q8WZA2 1011 aa14.09□□□□□ -0.15
LINC01140-207ENST00000490006 AKT1S1Q96B36 256 aa14.09□□□□□ -0.15
LINC01140-207ENST00000490006 SPATA31A1Q5TZJ5 1347 aa14.08□□□□□ -0.16
LINC01140-207ENST00000490006 TATP17735 454 aaPredicted RBP14.08□□□□□ -0.16
LINC01140-207ENST00000490006 RBM6P78332 1123 aaKnown RBP14.08□□□□□ -0.16
LINC01140-207ENST00000490006 CCDC146Q8IYE0 955 aa14.08□□□□□ -0.16
LINC01140-207ENST00000490006 ADAMTS8Q9UP79 889 aa14.08□□□□□ -0.16
LINC01140-207ENST00000490006 CDK12Q9NYV4 1490 aaPredicted RBP14.08□□□□□ -0.16
LINC01140-207ENST00000490006 CRB1P82279 1406 aa14.07□□□□□ -0.16
LINC01140-207ENST00000490006 RGPD2P0DJD1 1756 aa14.07□□□□□ -0.16
LINC01140-207ENST00000490006 LMO7Q8WWI1 1683 aa14.06□□□□□ -0.16
LINC01140-207ENST00000490006 IL2RBP14784 551 aa14.06□□□□□ -0.16
LINC01140-207ENST00000490006 DDX54Q8TDD1 881 aaKnown RBP14.06□□□□□ -0.16
LINC01140-207ENST00000490006 CCER2I3L3R5 266 aa14.05□□□□□ -0.16
LINC01140-207ENST00000490006 EXOC5O00471 708 aa14.05□□□□□ -0.16
LINC01140-207ENST00000490006 PRKAR2BP31323 418 aa14.05□□□□□ -0.16
LINC01140-207ENST00000490006 SEPT12Q8IYM1 358 aa14.05□□□□□ -0.16
LINC01140-207ENST00000490006 PNISRQ8TF01 805 aaKnown RBP14.05□□□□□ -0.16
LINC01140-207ENST00000490006 NEFMP07197 916 aa14.04□□□□□ -0.16
LINC01140-207ENST00000490006 THRAP3Q9Y2W1 955 aaKnown RBP14.04□□□□□ -0.16
LINC01140-207ENST00000490006 ATRNO75882 1429 aa14.04□□□□□ -0.16
LINC01140-207ENST00000490006 NWD2Q9ULI1 1742 aa14.04□□□□□ -0.16
LINC01140-207ENST00000490006 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
LINC01140-207ENST00000490006 PDE3BQ13370 1112 aa14.03□□□□□ -0.16
LINC01140-207ENST00000490006 FAM182BQ5T319 152 aa14.03□□□□□ -0.16
LINC01140-207ENST00000490006 ZCRB1Q8TBF4 217 aaKnown RBP14.03□□□□□ -0.16
LINC01140-207ENST00000490006 IGSF1Q8N6C5 1336 aa14.03□□□□□ -0.16
LINC01140-207ENST00000490006 FCHSD2O94868 740 aa14.02□□□□□ -0.17
LINC01140-207ENST00000490006 NEUROD2Q15784 382 aa14.02□□□□□ -0.17
LINC01140-207ENST00000490006 DDB1Q16531 1140 aa14.02□□□□□ -0.17
LINC01140-207ENST00000490006 PLEKHO1Q53GL0 409 aaPredicted RBP14.02□□□□□ -0.17
LINC01140-207ENST00000490006 PHACTR3Q96KR7 559 aa14.02□□□□□ -0.17
LINC01140-207ENST00000490006 SALL2Q9Y467 1007 aaPredicted RBP14.02□□□□□ -0.17
LINC01140-207ENST00000490006 BARGINQ6ZT62 677 aa14.01□□□□□ -0.17
LINC01140-207ENST00000490006 RSPH6AQ9H0K4 717 aa14.01□□□□□ -0.17
LINC01140-207ENST00000490006 PNNQ9H307 717 aaKnown RBP14.01□□□□□ -0.17
LINC01140-207ENST00000490006 COL3A1P02461 1466 aaPredicted RBP14.01□□□□□ -0.17
LINC01140-207ENST00000490006 NRAPQ86VF7 1730 aa14.01□□□□□ -0.17
LINC01140-207ENST00000490006 SPG7Q9UQ90 795 aa14□□□□□ -0.17
LINC01140-207ENST00000490006 RRP7AQ9Y3A4 280 aaKnown RBP14□□□□□ -0.17
LINC01140-207ENST00000490006 ABCC6O95255 1503 aa14□□□□□ -0.17
LINC01140-207ENST00000490006 MAPK8IP3Q9UPT6 1336 aa14□□□□□ -0.17
LINC01140-207ENST00000490006 MTHFSDQ2M296 383 aaKnown RBP13.99□□□□□ -0.17
LINC01140-207ENST00000490006 ZNF530Q6P9A1 599 aaPredicted RBP13.99□□□□□ -0.17
LINC01140-207ENST00000490006 CDCA7Q9BWT1 371 aaPredicted RBP13.99□□□□□ -0.17
LINC01140-207ENST00000490006 APAF1O14727 1248 aa13.97□□□□□ -0.17
LINC01140-207ENST00000490006 ONECUT3O60422 494 aaPredicted RBP13.97□□□□□ -0.17
LINC01140-207ENST00000490006 AMOTQ4VCS5 1084 aa13.97□□□□□ -0.17
LINC01140-207ENST00000490006 C1orf141Q5JVX7 400 aa13.97□□□□□ -0.17
LINC01140-207ENST00000490006 RUNDC1Q96C34 613 aa13.97□□□□□ -0.17
LINC01140-207ENST00000490006 KRT27Q7Z3Y8 459 aa13.96□□□□□ -0.17
LINC01140-207ENST00000490006 MARCH10Q8NA82 808 aaPredicted RBP13.96□□□□□ -0.17
LINC01140-207ENST00000490006 MEGF6O75095 1541 aa13.96□□□□□ -0.17
LINC01140-207ENST00000490006 GLI3P10071 1580 aa13.96□□□□□ -0.17
LINC01140-207ENST00000490006 RIPK4P57078 832 aa13.96□□□□□ -0.18
LINC01140-207ENST00000490006 MPRIPQ6WCQ1 1025 aa13.96□□□□□ -0.18
LINC01140-207ENST00000490006 REM2Q8IYK8 340 aaPredicted RBP13.96□□□□□ -0.18
LINC01140-207ENST00000490006 ACSBG1Q96GR2 724 aa13.96□□□□□ -0.18
LINC01140-207ENST00000490006 PLEKHF1Q96S99 279 aa13.96□□□□□ -0.18
LINC01140-207ENST00000490006 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.95□□□□□ -0.18
LINC01140-207ENST00000490006 CYP27B1O15528 508 aa13.95□□□□□ -0.18
LINC01140-207ENST00000490006 IFNL2Q8IZJ0 200 aa13.95□□□□□ -0.18
LINC01140-207ENST00000490006 GAS2L2Q8NHY3 880 aa13.94□□□□□ -0.18
LINC01140-207ENST00000490006 RTF1Q92541 710 aaKnown RBP13.94□□□□□ -0.18
LINC01140-207ENST00000490006 SYTL4Q96C24 671 aaPredicted RBP13.94□□□□□ -0.18
LINC01140-207ENST00000490006 FAM208AQ9UK61 1670 aaKnown RBP13.93□□□□□ -0.18
LINC01140-207ENST00000490006 KDRP35968 1356 aa13.93□□□□□ -0.18
LINC01140-207ENST00000490006 PHKG2P15735 406 aa13.93□□□□□ -0.18
LINC01140-207ENST00000490006 TMPOP42166 694 aaKnown RBP13.93□□□□□ -0.18
LINC01140-207ENST00000490006 DCTN1Q14203 1278 aa13.93□□□□□ -0.18
LINC01140-207ENST00000490006 NFE2L2Q16236 605 aa13.93□□□□□ -0.18
LINC01140-207ENST00000490006 LGR6Q9HBX8 967 aa13.93□□□□□ -0.18
LINC01140-207ENST00000490006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC01140-207ENST00000490006 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
LINC01140-207ENST00000490006 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
LINC01140-207ENST00000490006 GNAT3A8MTJ3 354 aa13.92□□□□□ -0.18
LINC01140-207ENST00000490006 AKAP4Q5JQC9 854 aa13.92□□□□□ -0.18
LINC01140-207ENST00000490006 MCM10Q7L590 875 aa13.92□□□□□ -0.18
LINC01140-207ENST00000490006 YTHDC1Q96MU7 727 aaKnown RBP13.92□□□□□ -0.18
LINC01140-207ENST00000490006 OVOS2A0A0G2JMS6 1433 aa13.91□□□□□ -0.18
LINC01140-207ENST00000490006 DISP2A7MBM2 1401 aa13.91□□□□□ -0.18
LINC01140-207ENST00000490006 RGPD1P0DJD0 1748 aa13.91□□□□□ -0.18
LINC01140-207ENST00000490006 PRIM1P49642 420 aaKnown RBP13.9□□□□□ -0.18
LINC01140-207ENST00000490006 ILDR2Q71H61 639 aa13.9□□□□□ -0.18
LINC01140-207ENST00000490006 THUMPD2Q9BTF0 503 aaKnown RBP13.9□□□□□ -0.18
LINC01140-207ENST00000490006 LAS1LQ9Y4W2 734 aaKnown RBP13.9□□□□□ -0.18
LINC01140-207ENST00000490006 RGS12O14924 1447 aa13.9□□□□□ -0.18
LINC01140-207ENST00000490006 KCNQ2O43526 872 aa13.89□□□□□ -0.19
LINC01140-207ENST00000490006 CABP4P57796 275 aa13.89□□□□□ -0.19
LINC01140-207ENST00000490006 IL17REQ8NFR9 667 aa13.89□□□□□ -0.19
LINC01140-207ENST00000490006 NCAPD2Q15021 1401 aa13.89□□□□□ -0.19
LINC01140-207ENST00000490006 RNMTO43148 476 aaKnown RBP13.88□□□□□ -0.19
LINC01140-207ENST00000490006 TRIM37O94972 964 aa13.88□□□□□ -0.19
LINC01140-207ENST00000490006 HSP90AB1P08238 724 aaKnown RBP13.88□□□□□ -0.19
LINC01140-207ENST00000490006 HNRNPUQ00839 825 aaKnown RBP eCLIP13.88□□□□□ -0.19
LINC01140-207ENST00000490006 FAM196AQ6ZSG2 479 aa13.88□□□□□ -0.19
LINC01140-207ENST00000490006 BRWD3Q6RI45 1802 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms