RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 TAF1LQ8IZX4 1826 aa10.86□□□□□ -0.67
COL9A1-209ENST00000489861 PKD1L3Q7Z443 1732 aa10.85□□□□□ -0.67
COL9A1-209ENST00000489861 DOT1LQ8TEK3 1739 aa10.85□□□□□ -0.67
COL9A1-209ENST00000489861 KIAA1210Q9ULL0 1709 aa10.85□□□□□ -0.67
COL9A1-209ENST00000489861 C5P01031 1676 aa10.85□□□□□ -0.67
COL9A1-209ENST00000489861 CCNL1Q9UK58 526 aaPredicted RBP10.84□□□□□ -0.67
COL9A1-209ENST00000489861 NSD2O96028 1365 aa10.84□□□□□ -0.67
COL9A1-209ENST00000489861 KIF13BQ9NQT8 1826 aa10.84□□□□□ -0.67
COL9A1-209ENST00000489861 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
COL9A1-209ENST00000489861 SOX12O15370 315 aa10.83□□□□□ -0.68
COL9A1-209ENST00000489861 IL2RBP14784 551 aa10.83□□□□□ -0.68
COL9A1-209ENST00000489861 PRIM1P49642 420 aaKnown RBP10.83□□□□□ -0.68
COL9A1-209ENST00000489861 TOGARAM1Q9Y4F4 1720 aa10.83□□□□□ -0.68
COL9A1-209ENST00000489861 SBF1O95248 1867 aa10.83□□□□□ -0.68
COL9A1-209ENST00000489861 BRCA1P38398 1863 aaKnown RBP10.83□□□□□ -0.68
COL9A1-209ENST00000489861 TNRC6CQ9HCJ0 1690 aaKnown RBP10.82□□□□□ -0.68
COL9A1-209ENST00000489861 SMIM5Q71RC9 77 aa10.82□□□□□ -0.68
COL9A1-209ENST00000489861 AMIGO3Q86WK7 504 aa10.82□□□□□ -0.68
COL9A1-209ENST00000489861 MPHOSPH9Q99550 1183 aa10.82□□□□□ -0.68
COL9A1-209ENST00000489861 RRAGCQ9HB90 399 aa10.82□□□□□ -0.68
COL9A1-209ENST00000489861 NFAT5O94916 1531 aa10.82□□□□□ -0.68
COL9A1-209ENST00000489861 C10orf71Q711Q0 1435 aa10.82□□□□□ -0.68
COL9A1-209ENST00000489861 ERBB3P21860 1342 aa10.82□□□□□ -0.68
COL9A1-209ENST00000489861 UBR3Q6ZT12 1888 aa10.81□□□□□ -0.68
COL9A1-209ENST00000489861 FOXN1O15353 648 aa10.81□□□□□ -0.68
COL9A1-209ENST00000489861 SYTL4Q96C24 671 aaPredicted RBP10.81□□□□□ -0.68
COL9A1-209ENST00000489861 NLRP2Q9NX02 1062 aa10.81□□□□□ -0.68
COL9A1-209ENST00000489861 PXDNLA1KZ92 1463 aa10.81□□□□□ -0.68
COL9A1-209ENST00000489861 C9orf131Q5VYM1 1079 aa10.8□□□□□ -0.68
COL9A1-209ENST00000489861 ARHGAP27Q6ZUM4 889 aa10.8□□□□□ -0.68
COL9A1-209ENST00000489861 PPARGC1BQ86YN6 1023 aaKnown RBP10.8□□□□□ -0.68
COL9A1-209ENST00000489861 SMC1BQ8NDV3 1235 aa10.8□□□□□ -0.68
COL9A1-209ENST00000489861 DDX54Q8TDD1 881 aaKnown RBP10.8□□□□□ -0.68
COL9A1-209ENST00000489861 ARFGEF1Q9Y6D6 1849 aa10.79□□□□□ -0.68
COL9A1-209ENST00000489861 ANKRD36BQ8N2N9 1353 aa10.79□□□□□ -0.68
COL9A1-209ENST00000489861 PRDM10Q9NQV6 1147 aa10.79□□□□□ -0.68
COL9A1-209ENST00000489861 BCS1LQ9Y276 419 aa10.79□□□□□ -0.68
COL9A1-209ENST00000489861 TNRC18O15417 2968 aaPredicted RBP10.79□□□□□ -0.68
COL9A1-209ENST00000489861 LTN1O94822 1766 aa10.78□□□□□ -0.68
COL9A1-209ENST00000489861 MLLT1Q03111 559 aaPredicted RBP10.78□□□□□ -0.68
COL9A1-209ENST00000489861 KCNH5Q8NCM2 988 aa10.78□□□□□ -0.68
COL9A1-209ENST00000489861 ABHD8Q96I13 439 aa10.78□□□□□ -0.68
COL9A1-209ENST00000489861 CABP2Q9NPB3 220 aa10.78□□□□□ -0.68
COL9A1-209ENST00000489861 KDM2AQ9Y2K7 1162 aa10.78□□□□□ -0.68
COL9A1-209ENST00000489861 PLEKHG2Q9H7P9 1386 aa10.77□□□□□ -0.68
COL9A1-209ENST00000489861 A0A0G2JLW4 131 aa10.77□□□□□ -0.69
COL9A1-209ENST00000489861 FLAD1Q8NFF5 587 aa10.77□□□□□ -0.69
COL9A1-209ENST00000489861 CABP1Q9NZU7 370 aa10.77□□□□□ -0.69
COL9A1-209ENST00000489861 KDM2BQ8NHM5 1336 aa10.77□□□□□ -0.69
COL9A1-209ENST00000489861 C4BP0C0L5 1744 aa10.76□□□□□ -0.69
COL9A1-209ENST00000489861 SRPK2P78362 688 aaKnown RBP10.76□□□□□ -0.69
COL9A1-209ENST00000489861 RGS19P49795 217 aa10.75□□□□□ -0.69
COL9A1-209ENST00000489861 CACNB1Q02641 598 aaPredicted RBP10.75□□□□□ -0.69
COL9A1-209ENST00000489861 MKRN1Q9UHC7 482 aaKnown RBP10.74□□□□□ -0.69
COL9A1-209ENST00000489861 TTC21BQ7Z4L5 1316 aa10.74□□□□□ -0.69
COL9A1-209ENST00000489861 USP47Q96K76 1375 aa10.74□□□□□ -0.69
COL9A1-209ENST00000489861 FCHSD2O94868 740 aa10.73□□□□□ -0.69
COL9A1-209ENST00000489861 PHF14O94880 888 aa10.73□□□□□ -0.69
COL9A1-209ENST00000489861 DCAF11Q8TEB1 546 aa10.73□□□□□ -0.69
COL9A1-209ENST00000489861 ANKRD24Q8TF21 1146 aa10.73□□□□□ -0.69
COL9A1-209ENST00000489861 RGPD2P0DJD1 1756 aa10.72□□□□□ -0.69
COL9A1-209ENST00000489861 VIRMAQ69YN4 1812 aaKnown RBP10.72□□□□□ -0.69
COL9A1-209ENST00000489861 CCDC88AQ3V6T2 1871 aa10.72□□□□□ -0.69
COL9A1-209ENST00000489861 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.72□□□□□ -0.69
COL9A1-209ENST00000489861 DPEP1P16444 411 aa10.72□□□□□ -0.69
COL9A1-209ENST00000489861 CTCFP49711 727 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-209ENST00000489861 LBX1P52954 281 aa10.72□□□□□ -0.69
COL9A1-209ENST00000489861 TGFB2P61812 414 aa10.72□□□□□ -0.69
COL9A1-209ENST00000489861 RNF181Q9P0P0 153 aa10.72□□□□□ -0.69
COL9A1-209ENST00000489861 MMP10P09238 476 aa10.7□□□□□ -0.7
COL9A1-209ENST00000489861 KCNA3P22001 575 aa10.7□□□□□ -0.7
COL9A1-209ENST00000489861 AK7Q96M32 723 aa10.7□□□□□ -0.7
COL9A1-209ENST00000489861 MAP2P11137 1827 aaKnown RBP10.7□□□□□ -0.7
COL9A1-209ENST00000489861 ITGB4P16144 1822 aa10.7□□□□□ -0.7
COL9A1-209ENST00000489861 FAM208AQ9UK61 1670 aaKnown RBP10.69□□□□□ -0.7
COL9A1-209ENST00000489861 CCDC85CA6NKD9 419 aa10.69□□□□□ -0.7
COL9A1-209ENST00000489861 PALLDQ8WX93 1383 aa10.68□□□□□ -0.7
COL9A1-209ENST00000489861 TTC21AQ8NDW8 1320 aa10.68□□□□□ -0.7
COL9A1-209ENST00000489861 VEGFAP15692 232 aaPredicted RBP10.68□□□□□ -0.7
COL9A1-209ENST00000489861 DCAF5Q96JK2 942 aa10.68□□□□□ -0.7
COL9A1-209ENST00000489861 CREBZFQ9NS37 354 aa10.68□□□□□ -0.7
COL9A1-209ENST00000489861 CNTNAP1P78357 1384 aa10.67□□□□□ -0.7
COL9A1-209ENST00000489861 POTECB2RU33 542 aa10.67□□□□□ -0.7
COL9A1-209ENST00000489861 SSFA2P28290 1259 aa10.67□□□□□ -0.7
COL9A1-209ENST00000489861 WBP1LQ9NX94 342 aa10.67□□□□□ -0.7
COL9A1-209ENST00000489861 MEGF6O75095 1541 aa10.67□□□□□ -0.7
COL9A1-209ENST00000489861 HSPA8P11142 646 aaKnown RBP10.66□□□□□ -0.7
COL9A1-209ENST00000489861 ZCRB1Q8TBF4 217 aaKnown RBP10.66□□□□□ -0.7
COL9A1-209ENST00000489861 AIDAQ96BJ3 306 aa10.66□□□□□ -0.7
COL9A1-209ENST00000489861 C4AP0C0L4 1744 aa10.66□□□□□ -0.7
COL9A1-209ENST00000489861 MON2Q7Z3U7 1717 aa10.65□□□□□ -0.7
COL9A1-209ENST00000489861 GLTPD2A6NH11 291 aa10.65□□□□□ -0.7
COL9A1-209ENST00000489861 VEGFBP49765 207 aa10.65□□□□□ -0.7
COL9A1-209ENST00000489861 NBPF1Q3BBV0 1214 aa10.65□□□□□ -0.7
COL9A1-209ENST00000489861 NSD3Q9BZ95 1437 aa10.65□□□□□ -0.7
COL9A1-209ENST00000489861 USP31Q70CQ4 1352 aa10.65□□□□□ -0.71
COL9A1-209ENST00000489861 TIAM2Q8IVF5 1701 aa10.64□□□□□ -0.71
COL9A1-209ENST00000489861 CENPJQ9HC77 1338 aaPredicted RBP10.64□□□□□ -0.71
COL9A1-209ENST00000489861 LINC00116Q8NCU8 138 aa10.64□□□□□ -0.71
COL9A1-209ENST00000489861 LTV1Q96GA3 475 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms