RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 SYTL4Q96C24 671 aaPredicted RBP15.31■□□□□ 0.04
PTP4A2-206ENST00000489313 SHANK3Q9BYB0 1731 aa15.29■□□□□ 0.04
PTP4A2-206ENST00000489313 PRIM1P49642 420 aaKnown RBP15.29■□□□□ 0.04
PTP4A2-206ENST00000489313 GPR162Q16538 588 aa15.29■□□□□ 0.04
PTP4A2-206ENST00000489313 SLC27A3Q5K4L6 730 aa15.29■□□□□ 0.04
PTP4A2-206ENST00000489313 PNPLA7Q6ZV29 1317 aa15.29■□□□□ 0.04
PTP4A2-206ENST00000489313 COL24A1Q17RW2 1714 aa15.29■□□□□ 0.04
PTP4A2-206ENST00000489313 FBLN1P23142 703 aa15.28■□□□□ 0.04
PTP4A2-206ENST00000489313 SLC16A10Q8TF71 515 aa15.28■□□□□ 0.04
PTP4A2-206ENST00000489313 TFCP2L1Q9NZI6 479 aa15.28■□□□□ 0.04
PTP4A2-206ENST00000489313 LY75O60449 1722 aa15.28■□□□□ 0.04
PTP4A2-206ENST00000489313 POLD1P28340 1107 aa15.28■□□□□ 0.04
PTP4A2-206ENST00000489313 MAP3K19Q56UN5 1328 aa15.28■□□□□ 0.04
PTP4A2-206ENST00000489313 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
PTP4A2-206ENST00000489313 ANKRD36BQ8N2N9 1353 aa15.27■□□□□ 0.03
PTP4A2-206ENST00000489313 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.03
PTP4A2-206ENST00000489313 HOXC9P31274 260 aa15.27■□□□□ 0.03
PTP4A2-206ENST00000489313 NSD2O96028 1365 aa15.26■□□□□ 0.03
PTP4A2-206ENST00000489313 C1QTNF8P60827 252 aa15.26■□□□□ 0.03
PTP4A2-206ENST00000489313 COG3Q96JB2 828 aa15.26■□□□□ 0.03
PTP4A2-206ENST00000489313 MEGF6O75095 1541 aa15.26■□□□□ 0.03
PTP4A2-206ENST00000489313 AMPHP49418 695 aa15.25■□□□□ 0.03
PTP4A2-206ENST00000489313 NLGN2Q8NFZ4 835 aa15.25■□□□□ 0.03
PTP4A2-206ENST00000489313 ZCRB1Q8TBF4 217 aaKnown RBP15.25■□□□□ 0.03
PTP4A2-206ENST00000489313 SP7Q8TDD2 431 aaPredicted RBP15.25■□□□□ 0.03
PTP4A2-206ENST00000489313 PUS7Q96PZ0 661 aaKnown RBP15.25■□□□□ 0.03
PTP4A2-206ENST00000489313 TONSLQ96HA7 1378 aa15.24■□□□□ 0.03
PTP4A2-206ENST00000489313 TESK2Q96S53 571 aa15.24■□□□□ 0.03
PTP4A2-206ENST00000489313 ST20-MTHFSA0A0A6YYL1 179 aa15.23■□□□□ 0.03
PTP4A2-206ENST00000489313 USHBP1Q8N6Y0 703 aa15.23■□□□□ 0.03
PTP4A2-206ENST00000489313 CCNL1Q9UK58 526 aaPredicted RBP15.23■□□□□ 0.03
PTP4A2-206ENST00000489313 NBPF6Q5VWK0 638 aa15.22■□□□□ 0.03
PTP4A2-206ENST00000489313 NBPF4Q96M43 638 aa15.22■□□□□ 0.03
PTP4A2-206ENST00000489313 RRS1Q15050 365 aaKnown RBP15.21■□□□□ 0.03
PTP4A2-206ENST00000489313 USP47Q96K76 1375 aa15.2■□□□□ 0.02
PTP4A2-206ENST00000489313 GIGYF1O75420 1035 aaPredicted RBP15.19■□□□□ 0.02
PTP4A2-206ENST00000489313 MSL1Q68DK7 614 aa15.19■□□□□ 0.02
PTP4A2-206ENST00000489313 COL23A1Q86Y22 540 aaPredicted RBP15.19■□□□□ 0.02
PTP4A2-206ENST00000489313 RTL1A6NKG5 1358 aa15.19■□□□□ 0.02
PTP4A2-206ENST00000489313 C5P01031 1676 aa15.19■□□□□ 0.02
PTP4A2-206ENST00000489313 YBX3P16989 372 aaKnown RBP eCLIP15.19■□□□□ 0.023e-10■■□□□ 14.2
PTP4A2-206ENST00000489313 DSG3P32926 999 aa15.19■□□□□ 0.02
PTP4A2-206ENST00000489313 GGNBP2Q9H3C7 697 aa15.19■□□□□ 0.02
PTP4A2-206ENST00000489313 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
PTP4A2-206ENST00000489313 FYB1O15117 783 aa15.17■□□□□ 0.02
PTP4A2-206ENST00000489313 RAPGEF4Q8WZA2 1011 aa15.17■□□□□ 0.02
PTP4A2-206ENST00000489313 TAF1LQ8IZX4 1826 aa15.17■□□□□ 0.02
PTP4A2-206ENST00000489313 SMG6Q86US8 1419 aaKnown RBP15.16■□□□□ 0.02
PTP4A2-206ENST00000489313 HSP90AB2PQ58FF8 381 aa15.15■□□□□ 0.02
PTP4A2-206ENST00000489313 KIF20BQ96Q89 1820 aa15.15■□□□□ 0.02
PTP4A2-206ENST00000489313 CGNL1Q0VF96 1302 aa15.15■□□□□ 0.02
PTP4A2-206ENST00000489313 GRIN3BO60391 1043 aa15.15■□□□□ 0.02
PTP4A2-206ENST00000489313 TATP17735 454 aaPredicted RBP15.15■□□□□ 0.02
PTP4A2-206ENST00000489313 ITGB4P16144 1822 aa15.14■□□□□ 0.01
PTP4A2-206ENST00000489313 MPRIPQ6WCQ1 1025 aa15.14■□□□□ 0.01
PTP4A2-206ENST00000489313 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
PTP4A2-206ENST00000489313 PALLDQ8WX93 1383 aa15.13■□□□□ 0.01
PTP4A2-206ENST00000489313 SLC24A1O60721 1099 aa15.13■□□□□ 0.01
PTP4A2-206ENST00000489313 PCDH11XQ9BZA7 1347 aa15.13■□□□□ 0.01
PTP4A2-206ENST00000489313 PCDH11YQ9BZA8 1340 aa15.13■□□□□ 0.01
PTP4A2-206ENST00000489313 INSRP06213 1382 aa15.13■□□□□ 0.01
PTP4A2-206ENST00000489313 C4BP0C0L5 1744 aa15.11■□□□□ 0.01
PTP4A2-206ENST00000489313 CYP27B1O15528 508 aa15.11■□□□□ 0.01
PTP4A2-206ENST00000489313 FLT4P35916 1363 aa15.11■□□□□ 0.01
PTP4A2-206ENST00000489313 TMF1P82094 1093 aa15.11■□□□□ 0.01
PTP4A2-206ENST00000489313 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
PTP4A2-206ENST00000489313 AMIGO3Q86WK7 504 aa15.11■□□□□ 0.01
PTP4A2-206ENST00000489313 ATP10DQ9P241 1426 aa15.1■□□□□ 0.01
PTP4A2-206ENST00000489313 UBR3Q6ZT12 1888 aa15.1■□□□□ 0.01
PTP4A2-206ENST00000489313 FLAD1Q8NFF5 587 aa15.1■□□□□ 0.01
PTP4A2-206ENST00000489313 CD2APQ9Y5K6 639 aa15.1■□□□□ 0.01
PTP4A2-206ENST00000489313 PKD1L3Q7Z443 1732 aa15.1■□□□□ 0.01
PTP4A2-206ENST00000489313 PHF14O94880 888 aa15.08■□□□□ 0
PTP4A2-206ENST00000489313 AK7Q96M32 723 aa15.08■□□□□ 0
PTP4A2-206ENST00000489313 WWC3Q9ULE0 1092 aa15.08■□□□□ 0
PTP4A2-206ENST00000489313 EMILIN1Q9Y6C2 1016 aa15.08■□□□□ 0
PTP4A2-206ENST00000489313 KIF24Q5T7B8 1368 aa15.07■□□□□ 0
PTP4A2-206ENST00000489313 MAP2P11137 1827 aaKnown RBP15.07■□□□□ 0
PTP4A2-206ENST00000489313 PIGBQ92521 554 aa15.07■□□□□ 0
PTP4A2-206ENST00000489313 SMARCC1Q92922 1105 aaPredicted RBP15.07■□□□□ 0
PTP4A2-206ENST00000489313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.06■□□□□ 0
PTP4A2-206ENST00000489313 PPM1GO15355 546 aaPredicted RBP15.06■□□□□ 0
PTP4A2-206ENST00000489313 ZNF526Q8TF50 670 aaPredicted RBP15.06■□□□□ 0
PTP4A2-206ENST00000489313 CARD14Q9BXL6 1004 aa15.06■□□□□ 0
PTP4A2-206ENST00000489313 HMGB2P26583 209 aaKnown RBP15.05■□□□□ -0
PTP4A2-206ENST00000489313 GPBP1L1Q9HC44 474 aaPredicted RBP15.05■□□□□ -0
PTP4A2-206ENST00000489313 NSD3Q9BZ95 1437 aa15.04■□□□□ -0
PTP4A2-206ENST00000489313 ANKRD26Q9UPS8 1709 aa15.04■□□□□ -0
PTP4A2-206ENST00000489313 IGSF1Q8N6C5 1336 aa15.04■□□□□ -0
PTP4A2-206ENST00000489313 LINC00116Q8NCU8 138 aa15.04■□□□□ -0
PTP4A2-206ENST00000489313 NCAPD2Q15021 1401 aa15.04■□□□□ -0
PTP4A2-206ENST00000489313 ADCY9O60503 1353 aa15.04■□□□□ -0
PTP4A2-206ENST00000489313 NKX1-1Q15270 411 aaPredicted RBP15.03■□□□□ -0
PTP4A2-206ENST00000489313 CDCA8Q53HL2 280 aa15.03■□□□□ -0
PTP4A2-206ENST00000489313 LOC102724428A0A0B4J2F2 783 aa15.02■□□□□ -0
PTP4A2-206ENST00000489313 SIK1P57059 783 aa15.02■□□□□ -0
PTP4A2-206ENST00000489313 SPG7Q9UQ90 795 aa15.02■□□□□ -0
PTP4A2-206ENST00000489313 SSFA2P28290 1259 aa15.02□□□□□ -0.01
PTP4A2-206ENST00000489313 ASAP1Q9ULH1 1129 aa15.02□□□□□ -0.01
PTP4A2-206ENST00000489313 ITPK1Q13572 414 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms