RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 USHBP1Q8N6Y0 703 aa17.33■□□□□ 0.36
SRRM1-216ENST00000489130 ZCRB1Q8TBF4 217 aaKnown RBP17.33■□□□□ 0.36
SRRM1-216ENST00000489130 BTAF1O14981 1849 aa17.33■□□□□ 0.36
SRRM1-216ENST00000489130 NCAPD2Q15021 1401 aa17.31■□□□□ 0.36
SRRM1-216ENST00000489130 WASHC2AQ641Q2 1341 aa17.31■□□□□ 0.36
SRRM1-216ENST00000489130 RAPGEF4Q8WZA2 1011 aa17.31■□□□□ 0.36
SRRM1-216ENST00000489130 PANK3Q9H999 370 aa17.31■□□□□ 0.36
SRRM1-216ENST00000489130 CASZ1Q86V15 1759 aa17.3■□□□□ 0.36
SRRM1-216ENST00000489130 NSD2O96028 1365 aa17.29■□□□□ 0.36
SRRM1-216ENST00000489130 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
SRRM1-216ENST00000489130 TATP17735 454 aaPredicted RBP17.29■□□□□ 0.36
SRRM1-216ENST00000489130 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
SRRM1-216ENST00000489130 DOT1LQ8TEK3 1739 aa17.29■□□□□ 0.36
SRRM1-216ENST00000489130 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
SRRM1-216ENST00000489130 STK32BQ9NY57 414 aa17.28■□□□□ 0.36
SRRM1-216ENST00000489130 PRIM1P49642 420 aaKnown RBP17.27■□□□□ 0.36
SRRM1-216ENST00000489130 SLC15A2Q16348 729 aa17.27■□□□□ 0.36
SRRM1-216ENST00000489130 SPON1Q9HCB6 807 aa17.27■□□□□ 0.36
SRRM1-216ENST00000489130 PCDH11XQ9BZA7 1347 aa17.26■□□□□ 0.35
SRRM1-216ENST00000489130 PCDH11YQ9BZA8 1340 aa17.26■□□□□ 0.35
SRRM1-216ENST00000489130 MAP2P11137 1827 aaKnown RBP17.26■□□□□ 0.35
SRRM1-216ENST00000489130 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
SRRM1-216ENST00000489130 PDGFDQ9GZP0 370 aaPredicted RBP17.25■□□□□ 0.35
SRRM1-216ENST00000489130 LRRC4BQ9NT99 713 aa17.25■□□□□ 0.35
SRRM1-216ENST00000489130 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
SRRM1-216ENST00000489130 KIF7Q2M1P5 1343 aa17.24■□□□□ 0.35
SRRM1-216ENST00000489130 TNNT2P45379 298 aaPredicted RBP17.24■□□□□ 0.35
SRRM1-216ENST00000489130 SLC27A3Q5K4L6 730 aa17.24■□□□□ 0.35
SRRM1-216ENST00000489130 EYA1Q99502 592 aa17.24■□□□□ 0.35
SRRM1-216ENST00000489130 CYP27B1O15528 508 aa17.23■□□□□ 0.35
SRRM1-216ENST00000489130 PIAS4Q8N2W9 510 aaPredicted RBP17.23■□□□□ 0.35
SRRM1-216ENST00000489130 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
SRRM1-216ENST00000489130 LY75O60449 1722 aa17.21■□□□□ 0.35
SRRM1-216ENST00000489130 PLEKHG2Q9H7P9 1386 aa17.21■□□□□ 0.35
SRRM1-216ENST00000489130 ZNF827Q17R98 1081 aa17.21■□□□□ 0.35
SRRM1-216ENST00000489130 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
SRRM1-216ENST00000489130 ZBTB7AO95365 584 aa17.2■□□□□ 0.34
SRRM1-216ENST00000489130 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
SRRM1-216ENST00000489130 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.2■□□□□ 0.34
SRRM1-216ENST00000489130 KAT6BQ8WYB5 2073 aa17.2■□□□□ 0.34
SRRM1-216ENST00000489130 PTGER2P43116 358 aa17.19■□□□□ 0.34
SRRM1-216ENST00000489130 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
SRRM1-216ENST00000489130 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
SRRM1-216ENST00000489130 MORC1Q86VD1 984 aa17.19■□□□□ 0.34
SRRM1-216ENST00000489130 PPP1R1BQ9UD71 204 aaPredicted RBP17.19■□□□□ 0.34
SRRM1-216ENST00000489130 SPG7Q9UQ90 795 aa17.19■□□□□ 0.34
SRRM1-216ENST00000489130 IGSF1Q8N6C5 1336 aa17.19■□□□□ 0.34
SRRM1-216ENST00000489130 TOGARAM1Q9Y4F4 1720 aa17.18■□□□□ 0.34
SRRM1-216ENST00000489130 MTFR1LQ9H019 292 aa17.18■□□□□ 0.34
SRRM1-216ENST00000489130 QSER1Q2KHR3 1735 aa17.16■□□□□ 0.34
SRRM1-216ENST00000489130 KCNQ4P56696 695 aa17.16■□□□□ 0.34
SRRM1-216ENST00000489130 CCNL1Q9UK58 526 aaPredicted RBP17.16■□□□□ 0.34
SRRM1-216ENST00000489130 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
SRRM1-216ENST00000489130 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
SRRM1-216ENST00000489130 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
SRRM1-216ENST00000489130 SGIP1Q9BQI5 828 aa17.15■□□□□ 0.34
SRRM1-216ENST00000489130 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
SRRM1-216ENST00000489130 PNPLA7Q6ZV29 1317 aa17.14■□□□□ 0.33
SRRM1-216ENST00000489130 PHKG2P15735 406 aa17.13■□□□□ 0.33
SRRM1-216ENST00000489130 IFNL2Q8IZJ0 200 aa17.13■□□□□ 0.33
SRRM1-216ENST00000489130 ITGB4P16144 1822 aa17.12■□□□□ 0.33
SRRM1-216ENST00000489130 PIGBQ92521 554 aa17.12■□□□□ 0.33
SRRM1-216ENST00000489130 TFCP2L1Q9NZI6 479 aa17.12■□□□□ 0.33
SRRM1-216ENST00000489130 SLC16A10Q8TF71 515 aa17.11■□□□□ 0.33
SRRM1-216ENST00000489130 SMARCC1Q92922 1105 aaPredicted RBP17.11■□□□□ 0.33
SRRM1-216ENST00000489130 TUBGCP6Q96RT7 1819 aa17.11■□□□□ 0.33
SRRM1-216ENST00000489130 C5P01031 1676 aa17.1■□□□□ 0.33
SRRM1-216ENST00000489130 HMGB2P26583 209 aaKnown RBP17.1■□□□□ 0.33
SRRM1-216ENST00000489130 KDRP35968 1356 aa17.1■□□□□ 0.33
SRRM1-216ENST00000489130 IL13P35225 146 aa17.09■□□□□ 0.33
SRRM1-216ENST00000489130 NPC1L1Q9UHC9 1359 aa17.09■□□□□ 0.33
SRRM1-216ENST00000489130 COL24A1Q17RW2 1714 aa17.08■□□□□ 0.32
SRRM1-216ENST00000489130 AMOTQ4VCS5 1084 aa17.08■□□□□ 0.32
SRRM1-216ENST00000489130 PLEKHO1Q53GL0 409 aaPredicted RBP17.08■□□□□ 0.32
SRRM1-216ENST00000489130 AEBP1Q8IUX7 1158 aa17.08■□□□□ 0.32
SRRM1-216ENST00000489130 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
SRRM1-216ENST00000489130 ADRA2BP18089 450 aa17.07■□□□□ 0.32
SRRM1-216ENST00000489130 MTHFSP49914 203 aa17.07■□□□□ 0.32
SRRM1-216ENST00000489130 CC2D1BQ5T0F9 858 aaKnown RBP17.07■□□□□ 0.32
SRRM1-216ENST00000489130 ARXQ96QS3 562 aa17.07■□□□□ 0.32
SRRM1-216ENST00000489130 FHDC1Q9C0D6 1143 aaPredicted RBP17.07■□□□□ 0.32
SRRM1-216ENST00000489130 MAP3K5Q99683 1374 aa17.06■□□□□ 0.32
SRRM1-216ENST00000489130 TAF1LQ8IZX4 1826 aa17.06■□□□□ 0.32
SRRM1-216ENST00000489130 HSP90AB1P08238 724 aaKnown RBP17.06■□□□□ 0.32
SRRM1-216ENST00000489130 SULT6B1Q6IMI4 303 aa17.06■□□□□ 0.32
SRRM1-216ENST00000489130 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
SRRM1-216ENST00000489130 SYT17Q9BSW7 474 aa17.06■□□□□ 0.32
SRRM1-216ENST00000489130 C4BP0C0L5 1744 aa17.05■□□□□ 0.32
SRRM1-216ENST00000489130 LOC102724428A0A0B4J2F2 783 aa17.05■□□□□ 0.32
SRRM1-216ENST00000489130 SIK1P57059 783 aa17.05■□□□□ 0.32
SRRM1-216ENST00000489130 COL23A1Q86Y22 540 aaPredicted RBP17.05■□□□□ 0.32
SRRM1-216ENST00000489130 ASAP1Q9ULH1 1129 aa17.05■□□□□ 0.32
SRRM1-216ENST00000489130 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
SRRM1-216ENST00000489130 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
SRRM1-216ENST00000489130 POLD1P28340 1107 aa17.04■□□□□ 0.32
SRRM1-216ENST00000489130 ZNF530Q6P9A1 599 aaPredicted RBP17.04■□□□□ 0.32
SRRM1-216ENST00000489130 ATG3Q9NT62 314 aa17.03■□□□□ 0.32
SRRM1-216ENST00000489130 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
SRRM1-216ENST00000489130 FLAD1Q8NFF5 587 aa17.02■□□□□ 0.32
SRRM1-216ENST00000489130 C1orf141Q5JVX7 400 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms