RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 PLXNC1O60486 1568 aa7.9□□□□□ -1.14
SF3A3-207ENST00000488934 SH3D19Q5HYK7 790 aa7.9□□□□□ -1.14
SF3A3-207ENST00000488934 HELBQ8NG08 1087 aaPredicted RBP7.9□□□□□ -1.14
SF3A3-207ENST00000488934 PCDHB15Q9Y5E8 787 aa7.9□□□□□ -1.14
SF3A3-207ENST00000488934 CROCC2H7BZ55 1655 aa7.89□□□□□ -1.15
SF3A3-207ENST00000488934 PTPN23Q9H3S7 1636 aa7.89□□□□□ -1.15
SF3A3-207ENST00000488934 MAST1Q9Y2H9 1570 aa7.89□□□□□ -1.15
SF3A3-207ENST00000488934 A2MP01023 1474 aa7.89□□□□□ -1.15
SF3A3-207ENST00000488934 CNTLNQ9NXG0 1405 aa7.89□□□□□ -1.15
SF3A3-207ENST00000488934 TSPY4P0CV99 314 aa7.89□□□□□ -1.15
SF3A3-207ENST00000488934 TSPY10P0CW01 314 aa7.89□□□□□ -1.15
SF3A3-207ENST00000488934 FOXC1Q12948 553 aa7.89□□□□□ -1.15
SF3A3-207ENST00000488934 SKIV2LQ15477 1246 aaKnown RBP7.89□□□□□ -1.15
SF3A3-207ENST00000488934 KANK4Q5T7N3 995 aaPredicted RBP7.89□□□□□ -1.15
SF3A3-207ENST00000488934 ESF1Q9H501 851 aaKnown RBP7.89□□□□□ -1.15
SF3A3-207ENST00000488934 LIMD1Q9UGP4 676 aa7.89□□□□□ -1.15
SF3A3-207ENST00000488934 MROH2AA6NES4 1674 aa7.89□□□□□ -1.15
SF3A3-207ENST00000488934 WNT7BP56706 349 aa7.88□□□□□ -1.15
SF3A3-207ENST00000488934 TSC1Q92574 1164 aa7.88□□□□□ -1.15
SF3A3-207ENST00000488934 FAM117AQ9C073 453 aa7.88□□□□□ -1.15
SF3A3-207ENST00000488934 POLR3EQ9NVU0 708 aa7.88□□□□□ -1.15
SF3A3-207ENST00000488934 FAM135AQ9P2D6 1515 aa7.88□□□□□ -1.15
SF3A3-207ENST00000488934 SHANK2Q9UPX8 1470 aa7.87□□□□□ -1.15
SF3A3-207ENST00000488934 FGD6Q6ZV73 1430 aa7.87□□□□□ -1.15
SF3A3-207ENST00000488934 ZNF644Q9H582 1327 aaPredicted RBP7.87□□□□□ -1.15
SF3A3-207ENST00000488934 TNFRSF10AO00220 468 aa7.87□□□□□ -1.15
SF3A3-207ENST00000488934 LILRB3O75022 631 aa7.87□□□□□ -1.15
SF3A3-207ENST00000488934 PKDCCQ504Y2 493 aa7.87□□□□□ -1.15
SF3A3-207ENST00000488934 CABLES1Q8TDN4 633 aa7.87□□□□□ -1.15
SF3A3-207ENST00000488934 TCOF1Q13428 1488 aaKnown RBP7.87□□□□□ -1.15
SF3A3-207ENST00000488934 PREX1Q8TCU6 1659 aa7.86□□□□□ -1.15
SF3A3-207ENST00000488934 SETD1BQ9UPS6 1966 aaKnown RBP7.86□□□□□ -1.15
SF3A3-207ENST00000488934 DNMT1P26358 1616 aaKnown RBP7.86□□□□□ -1.15
SF3A3-207ENST00000488934 EIF2AK4Q9P2K8 1649 aaKnown RBP7.86□□□□□ -1.15
SF3A3-207ENST00000488934 WNT7AO00755 349 aa7.86□□□□□ -1.15
SF3A3-207ENST00000488934 GDF9O60383 454 aa7.86□□□□□ -1.15
SF3A3-207ENST00000488934 KCNH2Q12809 1159 aa7.86□□□□□ -1.15
SF3A3-207ENST00000488934 MLECQ14165 292 aa7.86□□□□□ -1.15
SF3A3-207ENST00000488934 LYPD8Q6UX82 237 aa7.86□□□□□ -1.15
SF3A3-207ENST00000488934 TRIM67Q6ZTA4 783 aa7.86□□□□□ -1.15
SF3A3-207ENST00000488934 CYP4X1Q8N118 509 aa7.86□□□□□ -1.15
SF3A3-207ENST00000488934 EVA1BQ9NVM1 165 aa7.86□□□□□ -1.15
SF3A3-207ENST00000488934 CFAP99D6REC4 459 aa7.85□□□□□ -1.15
SF3A3-207ENST00000488934 DGAT1O75907 488 aa7.85□□□□□ -1.15
SF3A3-207ENST00000488934 CTHP32929 405 aa7.85□□□□□ -1.15
SF3A3-207ENST00000488934 QPCTQ16769 361 aa7.85□□□□□ -1.15
SF3A3-207ENST00000488934 C3P01024 1663 aa7.85□□□□□ -1.15
SF3A3-207ENST00000488934 DHX29Q7Z478 1369 aaKnown RBP7.84□□□□□ -1.15
SF3A3-207ENST00000488934 ZC3H13Q5T200 1668 aaKnown RBP7.84□□□□□ -1.15
SF3A3-207ENST00000488934 FAM187AA6NFU0 413 aa7.84□□□□□ -1.15
SF3A3-207ENST00000488934 UNC93B1Q9H1C4 597 aa7.84□□□□□ -1.15
SF3A3-207ENST00000488934 GOPCQ9HD26 462 aa7.84□□□□□ -1.15
SF3A3-207ENST00000488934 PKD2L1Q9P0L9 805 aa7.84□□□□□ -1.15
SF3A3-207ENST00000488934 KDM5DQ9BY66 1539 aa7.83□□□□□ -1.16
SF3A3-207ENST00000488934 DUOX2Q9NRD8 1548 aa7.83□□□□□ -1.16
SF3A3-207ENST00000488934 CLTCQ00610 1675 aaKnown RBP7.83□□□□□ -1.16
SF3A3-207ENST00000488934 PLEKHG3A1L390 1219 aa7.83□□□□□ -1.16
SF3A3-207ENST00000488934 TTC24A2A3L6 582 aaPredicted RBP7.83□□□□□ -1.16
SF3A3-207ENST00000488934 TRAF7Q6Q0C0 670 aa7.83□□□□□ -1.16
SF3A3-207ENST00000488934 ARMC2Q8NEN0 867 aa7.83□□□□□ -1.16
SF3A3-207ENST00000488934 PCMTD1Q96MG8 357 aaPredicted RBP7.83□□□□□ -1.16
SF3A3-207ENST00000488934 DAPK1P53355 1430 aa7.83□□□□□ -1.16
SF3A3-207ENST00000488934 RNF17Q9BXT8 1623 aaKnown RBP7.82□□□□□ -1.16
SF3A3-207ENST00000488934 BRPF1P55201 1214 aaPredicted RBP7.82□□□□□ -1.16
SF3A3-207ENST00000488934 SNIP1Q8TAD8 396 aaKnown RBP7.82□□□□□ -1.16
SF3A3-207ENST00000488934 ERBINQ96RT1 1412 aa7.82□□□□□ -1.16
SF3A3-207ENST00000488934 LMTK3Q96Q04 1460 aa7.81□□□□□ -1.16
SF3A3-207ENST00000488934 NPATQ14207 1427 aa7.81□□□□□ -1.16
SF3A3-207ENST00000488934 UHRF1BP1Q6BDS2 1440 aa7.81□□□□□ -1.16
SF3A3-207ENST00000488934 RTL5Q5HYW3 569 aaPredicted RBP7.81□□□□□ -1.16
SF3A3-207ENST00000488934 RC3H1Q5TC82 1133 aaKnown RBP7.81□□□□□ -1.16
SF3A3-207ENST00000488934 PTCRAQ6ISU1 281 aaPredicted RBP7.81□□□□□ -1.16
SF3A3-207ENST00000488934 GGT6Q6P531 493 aa7.81□□□□□ -1.16
SF3A3-207ENST00000488934 EHBP1Q8NDI1 1231 aa7.81□□□□□ -1.16
SF3A3-207ENST00000488934 ANKRD30AQ9BXX3 1397 aa7.81□□□□□ -1.16
SF3A3-207ENST00000488934 ABCC5O15440 1437 aa7.8□□□□□ -1.16
SF3A3-207ENST00000488934 KIF3BO15066 747 aa7.8□□□□□ -1.16
SF3A3-207ENST00000488934 KIF15Q9NS87 1388 aa7.8□□□□□ -1.16
SF3A3-207ENST00000488934 ADGRL2O95490 1459 aa7.8□□□□□ -1.16
SF3A3-207ENST00000488934 PRDM15P57071 1507 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-207ENST00000488934 F12P00748 615 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-207ENST00000488934 FAM50AQ14320 339 aaKnown RBP7.79□□□□□ -1.16
SF3A3-207ENST00000488934 PPP2R2DQ66LE6 453 aa7.79□□□□□ -1.16
SF3A3-207ENST00000488934 MRGPRX2Q96LB1 330 aa7.79□□□□□ -1.16
SF3A3-207ENST00000488934 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.79□□□□□ -1.16
SF3A3-207ENST00000488934 TOR4AQ9NXH8 423 aa7.79□□□□□ -1.16
SF3A3-207ENST00000488934 ZMYM3Q14202 1370 aa7.79□□□□□ -1.16
SF3A3-207ENST00000488934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.79□□□□□ -1.16
SF3A3-207ENST00000488934 ZNF142P52746 1687 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-207ENST00000488934 DEPDC5O75140 1603 aa7.78□□□□□ -1.16
SF3A3-207ENST00000488934 SKOR1P84550 965 aa7.78□□□□□ -1.16
SF3A3-207ENST00000488934 LINC01559Q495D7 138 aa7.78□□□□□ -1.16
SF3A3-207ENST00000488934 NBPF14Q5TI25 921 aa7.78□□□□□ -1.16
SF3A3-207ENST00000488934 ZNF511Q8NB15 262 aa7.78□□□□□ -1.16
SF3A3-207ENST00000488934 PROCA1Q8NCQ7 364 aaPredicted RBP7.78□□□□□ -1.16
SF3A3-207ENST00000488934 PNMA1Q8ND90 353 aa7.78□□□□□ -1.16
SF3A3-207ENST00000488934 IL27Q8NEV9 243 aa7.78□□□□□ -1.16
SF3A3-207ENST00000488934 BAP1Q92560 729 aa7.78□□□□□ -1.16
SF3A3-207ENST00000488934 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
SF3A3-207ENST00000488934 WASHC2CQ9Y4E1 1318 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms