RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 Q6ZNB5 142 aa8.63□□□□□ -1.03
HDLBP-243ENST00000488923 MRPL50Q8N5N7 158 aaKnown RBP8.63□□□□□ -1.03
HDLBP-243ENST00000488923 DIP2AQ14689 1571 aa8.63□□□□□ -1.03
HDLBP-243ENST00000488923 CD163L1Q9NR16 1453 aa8.63□□□□□ -1.03
HDLBP-243ENST00000488923 ARHGAP23Q9P227 1491 aa8.63□□□□□ -1.03
HDLBP-243ENST00000488923 METP08581 1390 aa8.62□□□□□ -1.03
HDLBP-243ENST00000488923 FYB1O15117 783 aa8.62□□□□□ -1.03
HDLBP-243ENST00000488923 NEFMP07197 916 aa8.62□□□□□ -1.03
HDLBP-243ENST00000488923 CT47B1P0C2W7 299 aaPredicted RBP8.62□□□□□ -1.03
HDLBP-243ENST00000488923 AAMPQ13685 434 aa8.62□□□□□ -1.03
HDLBP-243ENST00000488923 TXNDC2Q86VQ3 553 aa8.62□□□□□ -1.03
HDLBP-243ENST00000488923 MYH16Q9H6N6 1097 aa8.62□□□□□ -1.03
HDLBP-243ENST00000488923 BCL2L12Q9HB09 334 aa8.62□□□□□ -1.03
HDLBP-243ENST00000488923 CABP1Q9NZU7 370 aa8.62□□□□□ -1.03
HDLBP-243ENST00000488923 TBX22Q9Y458 520 aa8.62□□□□□ -1.03
HDLBP-243ENST00000488923 ANKRD26Q9UPS8 1709 aa8.62□□□□□ -1.03
HDLBP-243ENST00000488923 CPSF1Q10570 1443 aaKnown RBP8.62□□□□□ -1.03
HDLBP-243ENST00000488923 PIK3R4Q99570 1358 aa8.61□□□□□ -1.03
HDLBP-243ENST00000488923 ADGRB2O60241 1585 aa8.61□□□□□ -1.03
HDLBP-243ENST00000488923 WWC1Q8IX03 1113 aa8.61□□□□□ -1.03
HDLBP-243ENST00000488923 CCDC146Q8IYE0 955 aa8.61□□□□□ -1.03
HDLBP-243ENST00000488923 OXER1Q8TDS5 423 aa8.61□□□□□ -1.03
HDLBP-243ENST00000488923 IQSEC2Q5JU85 1478 aa8.61□□□□□ -1.03
HDLBP-243ENST00000488923 PPIP5K1Q6PFW1 1433 aa8.61□□□□□ -1.03
HDLBP-243ENST00000488923 ADAMTS13Q76LX8 1427 aa8.61□□□□□ -1.03
HDLBP-243ENST00000488923 CDC42BPGQ6DT37 1551 aa8.61□□□□□ -1.03
HDLBP-243ENST00000488923 AATKQ6ZMQ8 1374 aa8.61□□□□□ -1.03
HDLBP-243ENST00000488923 PNPLA6Q8IY17 1366 aa8.61□□□□□ -1.03
HDLBP-243ENST00000488923 MAPK8IP3Q9UPT6 1336 aa8.6□□□□□ -1.03
HDLBP-243ENST00000488923 SHPRHQ149N8 1683 aa8.6□□□□□ -1.03
HDLBP-243ENST00000488923 DIAPH1O60610 1272 aaKnown RBP8.6□□□□□ -1.03
HDLBP-243ENST00000488923 U2AF1L5P0DN76 240 aaPredicted RBP8.6□□□□□ -1.03
HDLBP-243ENST00000488923 PTPREP23469 700 aa8.6□□□□□ -1.03
HDLBP-243ENST00000488923 TNNT2P45379 298 aaPredicted RBP8.6□□□□□ -1.03
HDLBP-243ENST00000488923 U2AF1Q01081 240 aaKnown RBP eCLIP8.6□□□□□ -1.03
HDLBP-243ENST00000488923 WAPLQ7Z5K2 1190 aa8.6□□□□□ -1.03
HDLBP-243ENST00000488923 TCP11L2Q8N4U5 519 aa8.6□□□□□ -1.03
HDLBP-243ENST00000488923 ZNF454Q8N9F8 522 aa8.6□□□□□ -1.03
HDLBP-243ENST00000488923 NUDT16Q96DE0 195 aaKnown RBP8.6□□□□□ -1.03
HDLBP-243ENST00000488923 GGNBP2Q9H3C7 697 aa8.6□□□□□ -1.03
HDLBP-243ENST00000488923 IL16Q14005 1332 aa8.59□□□□□ -1.03
HDLBP-243ENST00000488923 PDE3AQ14432 1141 aa8.59□□□□□ -1.03
HDLBP-243ENST00000488923 UPF1Q92900 1129 aaKnown RBP eCLIP8.59□□□□□ -1.03
HDLBP-243ENST00000488923 NBPF3Q9H094 633 aa8.59□□□□□ -1.03
HDLBP-243ENST00000488923 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
HDLBP-243ENST00000488923 PTCH1Q13635 1447 aa8.59□□□□□ -1.03
HDLBP-243ENST00000488923 COL3A1P02461 1466 aaPredicted RBP8.58□□□□□ -1.04
HDLBP-243ENST00000488923 FCHSD2O94868 740 aa8.58□□□□□ -1.04
HDLBP-243ENST00000488923 MS4A1P11836 297 aa8.58□□□□□ -1.04
HDLBP-243ENST00000488923 PLCB2Q00722 1185 aa8.58□□□□□ -1.04
HDLBP-243ENST00000488923 CALD1Q05682 793 aaKnown RBP8.58□□□□□ -1.04
HDLBP-243ENST00000488923 LAPTM4AQ15012 233 aa8.58□□□□□ -1.04
HDLBP-243ENST00000488923 EXOC6Q8TAG9 804 aa8.58□□□□□ -1.04
HDLBP-243ENST00000488923 COG3Q96JB2 828 aa8.58□□□□□ -1.04
HDLBP-243ENST00000488923 ZBED2Q9BTP6 218 aa8.58□□□□□ -1.04
HDLBP-243ENST00000488923 C3P01024 1663 aa8.58□□□□□ -1.04
HDLBP-243ENST00000488923 KIF20BQ96Q89 1820 aa8.57□□□□□ -1.04
HDLBP-243ENST00000488923 SENP3-EIF4A1A0A087X0R7 540 aa8.57□□□□□ -1.04
HDLBP-243ENST00000488923 PLEKHG3A1L390 1219 aa8.57□□□□□ -1.04
HDLBP-243ENST00000488923 TCERG1O14776 1098 aaKnown RBP8.57□□□□□ -1.04
HDLBP-243ENST00000488923 FOSBP53539 338 aa8.57□□□□□ -1.04
HDLBP-243ENST00000488923 FER1L4A9Z1Z3 1794 aa8.57□□□□□ -1.04
HDLBP-243ENST00000488923 CDK12Q9NYV4 1490 aaPredicted RBP8.57□□□□□ -1.04
HDLBP-243ENST00000488923 FANCIQ9NVI1 1328 aa8.56□□□□□ -1.04
HDLBP-243ENST00000488923 U2SURPO15042 1029 aaKnown RBP8.56□□□□□ -1.04
HDLBP-243ENST00000488923 LTKP29376 864 aa8.56□□□□□ -1.04
HDLBP-243ENST00000488923 CENPQQ7L2Z9 268 aaPredicted RBP8.56□□□□□ -1.04
HDLBP-243ENST00000488923 ROBO2Q9HCK4 1378 aa8.56□□□□□ -1.04
HDLBP-243ENST00000488923 TTC21AQ8NDW8 1320 aa8.55□□□□□ -1.04
HDLBP-243ENST00000488923 ANKARQ7Z5J8 1434 aa8.55□□□□□ -1.04
HDLBP-243ENST00000488923 ITGBL1O95965 494 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-243ENST00000488923 TMPOP42166 694 aaKnown RBP8.55□□□□□ -1.04
HDLBP-243ENST00000488923 LMOD3Q0VAK6 560 aa8.55□□□□□ -1.04
HDLBP-243ENST00000488923 ZNF428Q96B54 188 aa8.55□□□□□ -1.04
HDLBP-243ENST00000488923 PLEKHF1Q96S99 279 aa8.55□□□□□ -1.04
HDLBP-243ENST00000488923 CRBNQ96SW2 442 aa8.55□□□□□ -1.04
HDLBP-243ENST00000488923 AMOTL2Q9Y2J4 779 aa8.55□□□□□ -1.04
HDLBP-243ENST00000488923 CANXP27824 592 aaKnown RBP8.54□□□□□ -1.04
HDLBP-243ENST00000488923 CEBPAP49715 358 aaPredicted RBP8.54□□□□□ -1.04
HDLBP-243ENST00000488923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDLBP-243ENST00000488923 ARXQ96QS3 562 aa8.54□□□□□ -1.04
HDLBP-243ENST00000488923 POLKQ9UBT6 870 aa8.54□□□□□ -1.04
HDLBP-243ENST00000488923 MON2Q7Z3U7 1717 aa8.54□□□□□ -1.04
HDLBP-243ENST00000488923 CEP170BQ9Y4F5 1589 aaPredicted RBP8.53□□□□□ -1.04
HDLBP-243ENST00000488923 ANKLE2Q86XL3 938 aa8.53□□□□□ -1.04
HDLBP-243ENST00000488923 USP6P35125 1406 aa8.53□□□□□ -1.04
HDLBP-243ENST00000488923 ITSN1Q15811 1721 aa8.52□□□□□ -1.05
HDLBP-243ENST00000488923 PLIN1O60240 522 aa8.52□□□□□ -1.05
HDLBP-243ENST00000488923 HAP1P54257 671 aaPredicted RBP8.52□□□□□ -1.05
HDLBP-243ENST00000488923 NEUROD2Q15784 382 aa8.52□□□□□ -1.05
HDLBP-243ENST00000488923 NYAP1Q6ZVC0 841 aa8.52□□□□□ -1.05
HDLBP-243ENST00000488923 HS6ST3Q8IZP7 471 aa8.52□□□□□ -1.05
HDLBP-243ENST00000488923 SLC26A8Q96RN1 970 aa8.52□□□□□ -1.05
HDLBP-243ENST00000488923 CRISPLD2Q9H0B8 497 aa8.52□□□□□ -1.05
HDLBP-243ENST00000488923 PTPRUQ92729 1446 aa8.52□□□□□ -1.05
HDLBP-243ENST00000488923 TOPAZ1Q8N9V7 1692 aa8.52□□□□□ -1.05
HDLBP-243ENST00000488923 TTC21BQ7Z4L5 1316 aa8.52□□□□□ -1.05
HDLBP-243ENST00000488923 PRR36Q9H6K5 1346 aa8.52□□□□□ -1.05
HDLBP-243ENST00000488923 KIF24Q5T7B8 1368 aa8.51□□□□□ -1.05
HDLBP-243ENST00000488923 AKAP12Q02952 1782 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms