RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 KIAA0232Q92628 1395 aa9.96□□□□□ -0.82
APOBEC3A-203ENST00000488758 PHRF1Q9P1Y6 1649 aaKnown RBP9.96□□□□□ -0.82
APOBEC3A-203ENST00000488758 CSB-PGBD3P0DP91 1061 aa9.95□□□□□ -0.82
APOBEC3A-203ENST00000488758 NEUROD2Q15784 382 aa9.95□□□□□ -0.82
APOBEC3A-203ENST00000488758 TCP11L2Q8N4U5 519 aa9.95□□□□□ -0.82
APOBEC3A-203ENST00000488758 PLEKHF1Q96S99 279 aa9.95□□□□□ -0.82
APOBEC3A-203ENST00000488758 AXIN2Q9Y2T1 843 aa9.95□□□□□ -0.82
APOBEC3A-203ENST00000488758 CPDO75976 1380 aa9.95□□□□□ -0.82
APOBEC3A-203ENST00000488758 JCADQ9P266 1359 aa9.94□□□□□ -0.82
APOBEC3A-203ENST00000488758 IGSF1Q8N6C5 1336 aa9.94□□□□□ -0.82
APOBEC3A-203ENST00000488758 EVA1CP58658 441 aa9.94□□□□□ -0.82
APOBEC3A-203ENST00000488758 FAM83GA6ND36 823 aa9.93□□□□□ -0.82
APOBEC3A-203ENST00000488758 NUTM2BA6NNL0 878 aaPredicted RBP9.93□□□□□ -0.82
APOBEC3A-203ENST00000488758 NUTM2EB1AL46 878 aaPredicted RBP9.93□□□□□ -0.82
APOBEC3A-203ENST00000488758 TMPOP42166 694 aaKnown RBP9.93□□□□□ -0.82
APOBEC3A-203ENST00000488758 PDE3BQ13370 1112 aa9.93□□□□□ -0.82
APOBEC3A-203ENST00000488758 NBPF6Q5VWK0 638 aa9.93□□□□□ -0.82
APOBEC3A-203ENST00000488758 AEBP1Q8IUX7 1158 aa9.93□□□□□ -0.82
APOBEC3A-203ENST00000488758 NUTM2AQ8IVF1 878 aaPredicted RBP9.93□□□□□ -0.82
APOBEC3A-203ENST00000488758 NBPF4Q96M43 638 aa9.93□□□□□ -0.82
APOBEC3A-203ENST00000488758 RRP7AQ9Y3A4 280 aaKnown RBP9.93□□□□□ -0.82
APOBEC3A-203ENST00000488758 RIPK4P57078 832 aa9.92□□□□□ -0.82
APOBEC3A-203ENST00000488758 MEX3CQ5U5Q3 659 aaKnown RBP9.92□□□□□ -0.82
APOBEC3A-203ENST00000488758 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
APOBEC3A-203ENST00000488758 PHACTR3Q96KR7 559 aa9.92□□□□□ -0.82
APOBEC3A-203ENST00000488758 NLRP2Q9NX02 1062 aa9.92□□□□□ -0.82
APOBEC3A-203ENST00000488758 CRYBG1Q9Y4K1 1723 aa9.92□□□□□ -0.82
APOBEC3A-203ENST00000488758 ERBB3P21860 1342 aa9.91□□□□□ -0.82
APOBEC3A-203ENST00000488758 GABBR2O75899 941 aa9.91□□□□□ -0.82
APOBEC3A-203ENST00000488758 NFE2L2Q16236 605 aa9.91□□□□□ -0.82
APOBEC3A-203ENST00000488758 USHBP1Q8N6Y0 703 aa9.91□□□□□ -0.82
APOBEC3A-203ENST00000488758 TSPYL2Q9H2G4 693 aaPredicted RBP9.91□□□□□ -0.82
APOBEC3A-203ENST00000488758 COL22A1Q8NFW1 1626 aaPredicted RBP9.91□□□□□ -0.82
APOBEC3A-203ENST00000488758 ADAMTS2O95450 1211 aa9.9□□□□□ -0.82
APOBEC3A-203ENST00000488758 NUBP1P53384 320 aa9.9□□□□□ -0.82
APOBEC3A-203ENST00000488758 GOLGA2Q08379 1002 aa9.9□□□□□ -0.82
APOBEC3A-203ENST00000488758 LMOD3Q0VAK6 560 aa9.9□□□□□ -0.82
APOBEC3A-203ENST00000488758 CCDC27Q2M243 656 aa9.9□□□□□ -0.82
APOBEC3A-203ENST00000488758 TOM1L2Q6ZVM7 507 aa9.9□□□□□ -0.82
APOBEC3A-203ENST00000488758 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
APOBEC3A-203ENST00000488758 STRN4Q9NRL3 753 aa9.9□□□□□ -0.82
APOBEC3A-203ENST00000488758 ABCC6O95255 1503 aa9.9□□□□□ -0.82
APOBEC3A-203ENST00000488758 COL18A1P39060 1754 aa9.9□□□□□ -0.82
APOBEC3A-203ENST00000488758 RGPD5Q99666 1765 aa9.9□□□□□ -0.82
APOBEC3A-203ENST00000488758 KDRP35968 1356 aa9.89□□□□□ -0.83
APOBEC3A-203ENST00000488758 PLEKHO1Q53GL0 409 aaPredicted RBP9.89□□□□□ -0.83
APOBEC3A-203ENST00000488758 WDR63Q8IWG1 891 aa9.89□□□□□ -0.83
APOBEC3A-203ENST00000488758 GAS2L2Q8NHY3 880 aa9.89□□□□□ -0.83
APOBEC3A-203ENST00000488758 PHF12Q96QT6 1004 aa9.89□□□□□ -0.83
APOBEC3A-203ENST00000488758 BTG4Q9NY30 223 aa9.89□□□□□ -0.83
APOBEC3A-203ENST00000488758 RGPD1P0DJD0 1748 aa9.89□□□□□ -0.83
APOBEC3A-203ENST00000488758 ABCA3Q99758 1704 aa9.89□□□□□ -0.83
APOBEC3A-203ENST00000488758 SPATA31A6Q5VVP1 1343 aa9.88□□□□□ -0.83
APOBEC3A-203ENST00000488758 WDR17Q8IZU2 1322 aa9.88□□□□□ -0.83
APOBEC3A-203ENST00000488758 ZNF521Q96K83 1311 aa9.88□□□□□ -0.83
APOBEC3A-203ENST00000488758 TATP17735 454 aaPredicted RBP9.88□□□□□ -0.83
APOBEC3A-203ENST00000488758 MTHFSDQ2M296 383 aaKnown RBP9.88□□□□□ -0.83
APOBEC3A-203ENST00000488758 AMOTQ4VCS5 1084 aa9.88□□□□□ -0.83
APOBEC3A-203ENST00000488758 ZNF772Q68DY9 489 aaPredicted RBP9.88□□□□□ -0.83
APOBEC3A-203ENST00000488758 KLHL34Q8N239 644 aa9.88□□□□□ -0.83
APOBEC3A-203ENST00000488758 RAPGEF4Q8WZA2 1011 aa9.88□□□□□ -0.83
APOBEC3A-203ENST00000488758 CDCA7LQ96GN5 454 aa9.88□□□□□ -0.83
APOBEC3A-203ENST00000488758 CAMTA1Q9Y6Y1 1673 aa9.87□□□□□ -0.83
APOBEC3A-203ENST00000488758 E9PSI1 815 aa9.87□□□□□ -0.83
APOBEC3A-203ENST00000488758 RXRBP28702 533 aa9.87□□□□□ -0.83
APOBEC3A-203ENST00000488758 CALD1Q05682 793 aaKnown RBP9.87□□□□□ -0.83
APOBEC3A-203ENST00000488758 RTF1Q92541 710 aaKnown RBP9.87□□□□□ -0.83
APOBEC3A-203ENST00000488758 CARD10Q9BWT7 1032 aa9.87□□□□□ -0.83
APOBEC3A-203ENST00000488758 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
APOBEC3A-203ENST00000488758 RGPD2P0DJD1 1756 aa9.86□□□□□ -0.83
APOBEC3A-203ENST00000488758 COL14A1Q05707 1796 aaKnown RBP9.86□□□□□ -0.83
APOBEC3A-203ENST00000488758 CLCN6P51797 869 aa9.86□□□□□ -0.83
APOBEC3A-203ENST00000488758 SLFN5Q08AF3 891 aa9.86□□□□□ -0.83
APOBEC3A-203ENST00000488758 LARP1Q6PKG0 1096 aaKnown RBP9.86□□□□□ -0.83
APOBEC3A-203ENST00000488758 IFNLR1Q8IU57 520 aaPredicted RBP9.86□□□□□ -0.83
APOBEC3A-203ENST00000488758 NGLY1Q96IV0 654 aa9.86□□□□□ -0.83
APOBEC3A-203ENST00000488758 COL5A2P05997 1499 aaPredicted RBP9.85□□□□□ -0.83
APOBEC3A-203ENST00000488758 GNAT3A8MTJ3 354 aa9.85□□□□□ -0.83
APOBEC3A-203ENST00000488758 HTATSF1O43719 755 aaKnown RBP9.85□□□□□ -0.83
APOBEC3A-203ENST00000488758 C1orf141Q5JVX7 400 aa9.85□□□□□ -0.83
APOBEC3A-203ENST00000488758 FAM212AQ96EL1 285 aa9.85□□□□□ -0.83
APOBEC3A-203ENST00000488758 MYH16Q9H6N6 1097 aa9.85□□□□□ -0.83
APOBEC3A-203ENST00000488758 SPG7Q9UQ90 795 aa9.85□□□□□ -0.83
APOBEC3A-203ENST00000488758 LMO7Q8WWI1 1683 aa9.85□□□□□ -0.83
APOBEC3A-203ENST00000488758 FAM208AQ9UK61 1670 aaKnown RBP9.85□□□□□ -0.83
APOBEC3A-203ENST00000488758 RGS12O14924 1447 aa9.84□□□□□ -0.83
APOBEC3A-203ENST00000488758 NCAPD2Q15021 1401 aa9.84□□□□□ -0.83
APOBEC3A-203ENST00000488758 ZNF530Q6P9A1 599 aaPredicted RBP9.84□□□□□ -0.83
APOBEC3A-203ENST00000488758 C8orf37Q96NL8 207 aa9.84□□□□□ -0.83
APOBEC3A-203ENST00000488758 USP35Q9P2H5 1018 aa9.84□□□□□ -0.83
APOBEC3A-203ENST00000488758 LAS1LQ9Y4W2 734 aaKnown RBP9.84□□□□□ -0.83
APOBEC3A-203ENST00000488758 AFF2P51816 1311 aa9.83□□□□□ -0.84
APOBEC3A-203ENST00000488758 IL16Q14005 1332 aa9.83□□□□□ -0.84
APOBEC3A-203ENST00000488758 CRB1P82279 1406 aa9.83□□□□□ -0.84
APOBEC3A-203ENST00000488758 IL2RBP14784 551 aa9.83□□□□□ -0.84
APOBEC3A-203ENST00000488758 DCTN1Q14203 1278 aa9.83□□□□□ -0.84
APOBEC3A-203ENST00000488758 AKAP4Q5JQC9 854 aa9.83□□□□□ -0.84
APOBEC3A-203ENST00000488758 DUSP27Q5VZP5 1158 aa9.83□□□□□ -0.84
APOBEC3A-203ENST00000488758 MCM10Q7L590 875 aa9.83□□□□□ -0.84
APOBEC3A-203ENST00000488758 TRMT2AQ8IZ69 625 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms