RNA–Protein interactions for RNA: ENST00000488702.1

TRAF3IP3-216, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 5

Gene TRAF3IP3, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-216ENST00000488702 PTSQ03393 145 aa9.16□□□□□ -0.94
TRAF3IP3-216ENST00000488702 FOXD4L5Q5VV16 416 aaPredicted RBP9.16□□□□□ -0.94
TRAF3IP3-216ENST00000488702 PPFIA3O75145 1194 aa9.15□□□□□ -0.94
TRAF3IP3-216ENST00000488702 VSIG8P0DPA2 414 aa9.15□□□□□ -0.94
TRAF3IP3-216ENST00000488702 FLIIQ13045 1269 aa9.15□□□□□ -0.94
TRAF3IP3-216ENST00000488702 OSBPL3Q9H4L5 887 aa9.15□□□□□ -0.94
TRAF3IP3-216ENST00000488702 TSGA10IPQ3SY00 556 aa9.14□□□□□ -0.95
TRAF3IP3-216ENST00000488702 POM121Q96HA1 1249 aa9.14□□□□□ -0.95
TRAF3IP3-216ENST00000488702 CDCA7Q9BWT1 371 aaPredicted RBP9.14□□□□□ -0.95
TRAF3IP3-216ENST00000488702 CHIC2Q9UKJ5 165 aa9.14□□□□□ -0.95
TRAF3IP3-216ENST00000488702 A0A1W2PRU2 124 aa9.13□□□□□ -0.95
TRAF3IP3-216ENST00000488702 GMPRP36959 345 aa9.13□□□□□ -0.95
TRAF3IP3-216ENST00000488702 RNF144AP50876 292 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP3-216ENST00000488702 CYP2U1Q7Z449 544 aa9.13□□□□□ -0.95
TRAF3IP3-216ENST00000488702 SLC35F4A4IF30 521 aa9.12□□□□□ -0.95
TRAF3IP3-216ENST00000488702 SOX11P35716 441 aa9.12□□□□□ -0.95
TRAF3IP3-216ENST00000488702 SLFNL1Q499Z3 407 aa9.12□□□□□ -0.95
TRAF3IP3-216ENST00000488702 GPC1P35052 558 aa9.11□□□□□ -0.95
TRAF3IP3-216ENST00000488702 CLN3Q13286 438 aa9.1□□□□□ -0.95
TRAF3IP3-216ENST00000488702 LYSMD3Q7Z3D4 306 aa9.1□□□□□ -0.95
TRAF3IP3-216ENST00000488702 RNF135Q8IUD6 432 aa9.1□□□□□ -0.95
TRAF3IP3-216ENST00000488702 CCDC155Q8N6L0 562 aa9.1□□□□□ -0.95
TRAF3IP3-216ENST00000488702 SENP3-EIF4A1A0A087X0R7 540 aa9.09□□□□□ -0.95
TRAF3IP3-216ENST00000488702 MEN1O00255 615 aa9.09□□□□□ -0.95
TRAF3IP3-216ENST00000488702 RAD21O60216 631 aa9.09□□□□□ -0.95
TRAF3IP3-216ENST00000488702 MYCP01106 439 aaPredicted RBP9.09□□□□□ -0.95
TRAF3IP3-216ENST00000488702 GNRH1P01148 92 aa9.09□□□□□ -0.95
TRAF3IP3-216ENST00000488702 SEMA3FQ13275 785 aa9.09□□□□□ -0.95
TRAF3IP3-216ENST00000488702 ESF1Q9H501 851 aaKnown RBP9.09□□□□□ -0.95
TRAF3IP3-216ENST00000488702 DOLKQ9UPQ8 538 aa9.09□□□□□ -0.95
TRAF3IP3-216ENST00000488702 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
TRAF3IP3-216ENST00000488702 INSM1Q01101 510 aaPredicted RBP9.08□□□□□ -0.96
TRAF3IP3-216ENST00000488702 USP4Q13107 963 aa9.08□□□□□ -0.96
TRAF3IP3-216ENST00000488702 ALG2Q9H553 416 aa9.08□□□□□ -0.96
TRAF3IP3-216ENST00000488702 PRICKLE2Q7Z3G6 844 aa9.07□□□□□ -0.96
TRAF3IP3-216ENST00000488702 NANOS1Q8WY41 292 aaKnown RBP9.07□□□□□ -0.96
TRAF3IP3-216ENST00000488702 GRIP2Q9C0E4 1043 aa9.07□□□□□ -0.96
TRAF3IP3-216ENST00000488702 ARHGEF10LQ9HCE6 1279 aa9.07□□□□□ -0.96
TRAF3IP3-216ENST00000488702 ITGA6P23229 1130 aa9.06□□□□□ -0.96
TRAF3IP3-216ENST00000488702 MAP7D1Q3KQU3 841 aa9.06□□□□□ -0.96
TRAF3IP3-216ENST00000488702 WWC1Q8IX03 1113 aa9.06□□□□□ -0.96
TRAF3IP3-216ENST00000488702 NLRP3Q96P20 1036 aa9.06□□□□□ -0.96
TRAF3IP3-216ENST00000488702 IL2RAP01589 272 aa9.05□□□□□ -0.96
TRAF3IP3-216ENST00000488702 PLPP7Q8NBV4 271 aa9.05□□□□□ -0.96
TRAF3IP3-216ENST00000488702 ESYT1Q9BSJ8 1104 aa9.05□□□□□ -0.96
TRAF3IP3-216ENST00000488702 RAB6BQ9NRW1 208 aa9.05□□□□□ -0.96
TRAF3IP3-216ENST00000488702 HRH3Q9Y5N1 445 aa9.05□□□□□ -0.96
TRAF3IP3-216ENST00000488702 LORP23490 312 aaPredicted RBP9.04□□□□□ -0.96
TRAF3IP3-216ENST00000488702 OXLD1Q5BKU9 147 aa9.04□□□□□ -0.96
TRAF3IP3-216ENST00000488702 GPR161Q8N6U8 529 aaKnown RBP9.04□□□□□ -0.96
TRAF3IP3-216ENST00000488702 CNKSR1Q969H4 720 aa9.04□□□□□ -0.96
TRAF3IP3-216ENST00000488702 SIRT1Q96EB6 747 aa9.04□□□□□ -0.96
TRAF3IP3-216ENST00000488702 SPATA31C2B4DYI2 1134 aa9.03□□□□□ -0.96
TRAF3IP3-216ENST00000488702 PIK3CDO00329 1044 aa9.03□□□□□ -0.96
TRAF3IP3-216ENST00000488702 SLC27A3Q5K4L6 730 aa9.03□□□□□ -0.96
TRAF3IP3-216ENST00000488702 XAGE2Q96GT9 111 aa9.03□□□□□ -0.96
TRAF3IP3-216ENST00000488702 POM121CA8CG34 1229 aa9.02□□□□□ -0.97
TRAF3IP3-216ENST00000488702 RHOQP17081 205 aa9.02□□□□□ -0.97
TRAF3IP3-216ENST00000488702 CENPCQ03188 943 aa9.02□□□□□ -0.97
TRAF3IP3-216ENST00000488702 POU4F2Q12837 409 aa9.01□□□□□ -0.97
TRAF3IP3-216ENST00000488702 WDR44Q5JSH3 913 aa9.01□□□□□ -0.97
TRAF3IP3-216ENST00000488702 NFATC2IPQ8NCF5 419 aa9.01□□□□□ -0.97
TRAF3IP3-216ENST00000488702 ADAMTS19Q8TE59 1207 aa9.01□□□□□ -0.97
TRAF3IP3-216ENST00000488702 STAU1O95793 577 aaKnown RBP9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 ESCO1Q5FWF5 840 aa9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 NBPF10Q6P3W6 841 aaKnown RBP9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 VWA5B2Q8N398 1253 aa9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 FNBP4Q8N3X1 1017 aaPredicted RBP9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 NBPF15Q8N660 670 aa9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 CLUAP1Q96AJ1 413 aa9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 FHDC1Q9C0D6 1143 aaPredicted RBP9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 ETNK1Q9HBU6 452 aa9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 STK17AQ9UEE5 414 aa9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 DYRK1BQ9Y463 629 aa9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 NISCHQ9Y2I1 1504 aa9□□□□□ -0.97
TRAF3IP3-216ENST00000488702 KRT76Q01546 638 aa8.99□□□□□ -0.97
TRAF3IP3-216ENST00000488702 SV2AQ7L0J3 742 aa8.99□□□□□ -0.97
TRAF3IP3-216ENST00000488702 CUEDC1Q9NWM3 386 aaPredicted RBP8.99□□□□□ -0.97
TRAF3IP3-216ENST00000488702 SKIP12755 728 aa8.98□□□□□ -0.97
TRAF3IP3-216ENST00000488702 SCNN1DP51172 638 aa8.98□□□□□ -0.97
TRAF3IP3-216ENST00000488702 ZSCAN1Q8NBB4 408 aa8.98□□□□□ -0.97
TRAF3IP3-216ENST00000488702 CDC14CA4D256 554 aa8.97□□□□□ -0.97
TRAF3IP3-216ENST00000488702 WASLO00401 505 aaPredicted RBP8.97□□□□□ -0.97
TRAF3IP3-216ENST00000488702 LZTS3O60299 673 aaPredicted RBP8.97□□□□□ -0.97
TRAF3IP3-216ENST00000488702 TAS1R3Q7RTX0 852 aa8.97□□□□□ -0.97
TRAF3IP3-216ENST00000488702 ZSCAN10Q96SZ4 725 aaPredicted RBP8.97□□□□□ -0.97
TRAF3IP3-216ENST00000488702 COL25A1Q9BXS0 654 aaPredicted RBP8.97□□□□□ -0.97
TRAF3IP3-216ENST00000488702 INHAP05111 366 aa8.96□□□□□ -0.98
TRAF3IP3-216ENST00000488702 HDGFL1Q5TGJ6 251 aa8.96□□□□□ -0.98
TRAF3IP3-216ENST00000488702 PROSER2Q86WR7 435 aaPredicted RBP8.96□□□□□ -0.98
TRAF3IP3-216ENST00000488702 GMCL1Q96IK5 515 aa8.96□□□□□ -0.98
TRAF3IP3-216ENST00000488702 PCDHGA11Q9Y5H2 935 aa8.96□□□□□ -0.98
TRAF3IP3-216ENST00000488702 GDF10P55107 478 aa8.95□□□□□ -0.98
TRAF3IP3-216ENST00000488702 EML3Q32P44 896 aa8.95□□□□□ -0.98
TRAF3IP3-216ENST00000488702 RNFT1Q5M7Z0 435 aa8.95□□□□□ -0.98
TRAF3IP3-216ENST00000488702 TRIM22Q8IYM9 498 aa8.95□□□□□ -0.98
TRAF3IP3-216ENST00000488702 UCN2Q96RP3 112 aa8.95□□□□□ -0.98
TRAF3IP3-216ENST00000488702 TIMMDC1Q9NPL8 285 aa8.95□□□□□ -0.98
TRAF3IP3-216ENST00000488702 A6NJR5 290 aa8.94□□□□□ -0.98
TRAF3IP3-216ENST00000488702 NCOA4Q13772 614 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms