RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
SNU13-208ENST00000488571 MTFR1LQ9H019 292 aa16.17■□□□□ 0.18
SNU13-208ENST00000488571 SLC12A5Q9H2X9 1139 aa16.17■□□□□ 0.18
SNU13-208ENST00000488571 A0A1W2PP64 1363 aa16.16■□□□□ 0.18
SNU13-208ENST00000488571 ANKRD24Q8TF21 1146 aa16.16■□□□□ 0.18
SNU13-208ENST00000488571 SYT17Q9BSW7 474 aa16.16■□□□□ 0.18
SNU13-208ENST00000488571 FHDC1Q9C0D6 1143 aaPredicted RBP16.16■□□□□ 0.18
SNU13-208ENST00000488571 TMC1Q8TDI8 760 aa16.15■□□□□ 0.18
SNU13-208ENST00000488571 ZNF827Q17R98 1081 aa16.14■□□□□ 0.17
SNU13-208ENST00000488571 HDGFL2Q7Z4V5 671 aaPredicted RBP16.14■□□□□ 0.17
SNU13-208ENST00000488571 LRRC4BQ9NT99 713 aa16.14■□□□□ 0.17
SNU13-208ENST00000488571 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
SNU13-208ENST00000488571 FAM208AQ9UK61 1670 aaKnown RBP16.14■□□□□ 0.17
SNU13-208ENST00000488571 TERF2IPQ9NYB0 399 aa16.12■□□□□ 0.17
SNU13-208ENST00000488571 QSER1Q2KHR3 1735 aa16.11■□□□□ 0.17
SNU13-208ENST00000488571 KAT6BQ8WYB5 2073 aa16.11■□□□□ 0.17
SNU13-208ENST00000488571 IP6K1Q92551 441 aa16.11■□□□□ 0.17
SNU13-208ENST00000488571 PUS7Q96PZ0 661 aaKnown RBP16.11■□□□□ 0.17
SNU13-208ENST00000488571 SHANK3Q9BYB0 1731 aa16.11■□□□□ 0.17
SNU13-208ENST00000488571 FXR2P51116 673 aaKnown RBP eCLIP16.1■□□□□ 0.17
SNU13-208ENST00000488571 COL24A1Q17RW2 1714 aa16.1■□□□□ 0.17
SNU13-208ENST00000488571 MAP3K5Q99683 1374 aa16.1■□□□□ 0.17
SNU13-208ENST00000488571 RGPD2P0DJD1 1756 aa16.1■□□□□ 0.17
SNU13-208ENST00000488571 CHD4Q14839 1912 aa16.09■□□□□ 0.17
SNU13-208ENST00000488571 ZNF784Q8NCA9 323 aaPredicted RBP16.09■□□□□ 0.17
SNU13-208ENST00000488571 ARXQ96QS3 562 aa16.09■□□□□ 0.17
SNU13-208ENST00000488571 TUBGCP6Q96RT7 1819 aa16.09■□□□□ 0.17
SNU13-208ENST00000488571 DOT1LQ8TEK3 1739 aa16.08■□□□□ 0.17
SNU13-208ENST00000488571 TESK2Q96S53 571 aa16.08■□□□□ 0.16
SNU13-208ENST00000488571 LY75O60449 1722 aa16.08■□□□□ 0.16
SNU13-208ENST00000488571 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
SNU13-208ENST00000488571 LTV1Q96GA3 475 aaPredicted RBP16.07■□□□□ 0.16
SNU13-208ENST00000488571 MAP3K19Q56UN5 1328 aa16.07■□□□□ 0.16
SNU13-208ENST00000488571 NSD2O96028 1365 aa16.06■□□□□ 0.16
SNU13-208ENST00000488571 TONSLQ96HA7 1378 aa16.06■□□□□ 0.16
SNU13-208ENST00000488571 FBLN1P23142 703 aa16.06■□□□□ 0.16
SNU13-208ENST00000488571 SLC27A3Q5K4L6 730 aa16.06■□□□□ 0.16
SNU13-208ENST00000488571 PNPLA7Q6ZV29 1317 aa16.05■□□□□ 0.16
SNU13-208ENST00000488571 HOXC9P31274 260 aa16.05■□□□□ 0.16
SNU13-208ENST00000488571 MEGF6O75095 1541 aa16.04■□□□□ 0.16
SNU13-208ENST00000488571 ANKRD36BQ8N2N9 1353 aa16.04■□□□□ 0.16
SNU13-208ENST00000488571 KCNQ4P56696 695 aa16.04■□□□□ 0.16
SNU13-208ENST00000488571 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
SNU13-208ENST00000488571 COG3Q96JB2 828 aa16.04■□□□□ 0.16
SNU13-208ENST00000488571 ST20-MTHFSA0A0A6YYL1 179 aa16.03■□□□□ 0.16
SNU13-208ENST00000488571 PRIM1P49642 420 aaKnown RBP16.03■□□□□ 0.16
SNU13-208ENST00000488571 SLC16A10Q8TF71 515 aa16.03■□□□□ 0.16
SNU13-208ENST00000488571 SYTL4Q96C24 671 aaPredicted RBP16.02■□□□□ 0.16
SNU13-208ENST00000488571 AMPHP49418 695 aa16.01■□□□□ 0.15
SNU13-208ENST00000488571 ZCRB1Q8TBF4 217 aaKnown RBP16.01■□□□□ 0.15
SNU13-208ENST00000488571 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
SNU13-208ENST00000488571 RTL1A6NKG5 1358 aa16■□□□□ 0.15
SNU13-208ENST00000488571 TFCP2L1Q9NZI6 479 aa16■□□□□ 0.15
SNU13-208ENST00000488571 GOLGB1Q14789 3259 aaKnown RBP16■□□□□ 0.15
SNU13-208ENST00000488571 RRS1Q15050 365 aaKnown RBP15.99■□□□□ 0.15
SNU13-208ENST00000488571 NBPF6Q5VWK0 638 aa15.99■□□□□ 0.15
SNU13-208ENST00000488571 NBPF4Q96M43 638 aa15.99■□□□□ 0.15
SNU13-208ENST00000488571 FYB1O15117 783 aa15.98■□□□□ 0.15
SNU13-208ENST00000488571 POLD1P28340 1107 aa15.98■□□□□ 0.15
SNU13-208ENST00000488571 GPR162Q16538 588 aa15.97■□□□□ 0.15
SNU13-208ENST00000488571 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
SNU13-208ENST00000488571 USHBP1Q8N6Y0 703 aa15.97■□□□□ 0.15
SNU13-208ENST00000488571 NLGN2Q8NFZ4 835 aa15.97■□□□□ 0.15
SNU13-208ENST00000488571 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
SNU13-208ENST00000488571 C5P01031 1676 aa15.96■□□□□ 0.15
SNU13-208ENST00000488571 CCNL1Q9UK58 526 aaPredicted RBP15.96■□□□□ 0.15
SNU13-208ENST00000488571 KIF20BQ96Q89 1820 aa15.96■□□□□ 0.14
SNU13-208ENST00000488571 SLC24A1O60721 1099 aa15.95■□□□□ 0.14
SNU13-208ENST00000488571 CGNL1Q0VF96 1302 aa15.94■□□□□ 0.14
SNU13-208ENST00000488571 TAF1LQ8IZX4 1826 aa15.94■□□□□ 0.14
SNU13-208ENST00000488571 C1QTNF8P60827 252 aa15.94■□□□□ 0.14
SNU13-208ENST00000488571 COL23A1Q86Y22 540 aaPredicted RBP15.94■□□□□ 0.14
SNU13-208ENST00000488571 USP47Q96K76 1375 aa15.94■□□□□ 0.14
SNU13-208ENST00000488571 TOGARAM1Q9Y4F4 1720 aa15.94■□□□□ 0.14
SNU13-208ENST00000488571 INSRP06213 1382 aa15.93■□□□□ 0.14
SNU13-208ENST00000488571 SMG6Q86US8 1419 aaKnown RBP15.93■□□□□ 0.14
SNU13-208ENST00000488571 HSP90AB2PQ58FF8 381 aa15.92■□□□□ 0.14
SNU13-208ENST00000488571 PELP1Q8IZL8 1130 aaKnown RBP15.92■□□□□ 0.14
SNU13-208ENST00000488571 RAPGEF4Q8WZA2 1011 aa15.92■□□□□ 0.14
SNU13-208ENST00000488571 YBX3P16989 372 aaKnown RBP eCLIP15.91■□□□□ 0.148e-13■■■□□ 17.1
SNU13-208ENST00000488571 ITGB4P16144 1822 aa15.91■□□□□ 0.14
SNU13-208ENST00000488571 PCDH11XQ9BZA7 1347 aa15.91■□□□□ 0.14
SNU13-208ENST00000488571 PCDH11YQ9BZA8 1340 aa15.91■□□□□ 0.14
SNU13-208ENST00000488571 PKD1L3Q7Z443 1732 aa15.91■□□□□ 0.14
SNU13-208ENST00000488571 FLT4P35916 1363 aa15.9■□□□□ 0.14
SNU13-208ENST00000488571 KIF24Q5T7B8 1368 aa15.9■□□□□ 0.14
SNU13-208ENST00000488571 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
SNU13-208ENST00000488571 TATP17735 454 aaPredicted RBP15.9■□□□□ 0.14
SNU13-208ENST00000488571 TMF1P82094 1093 aa15.9■□□□□ 0.14
SNU13-208ENST00000488571 PALLDQ8WX93 1383 aa15.89■□□□□ 0.13
SNU13-208ENST00000488571 CYP27B1O15528 508 aa15.89■□□□□ 0.13
SNU13-208ENST00000488571 MSL1Q68DK7 614 aa15.89■□□□□ 0.13
SNU13-208ENST00000488571 C4BP0C0L5 1744 aa15.88■□□□□ 0.13
SNU13-208ENST00000488571 ANKRD26Q9UPS8 1709 aa15.88■□□□□ 0.13
SNU13-208ENST00000488571 NCAPD2Q15021 1401 aa15.88■□□□□ 0.13
SNU13-208ENST00000488571 HAX1O00165 279 aa15.87■□□□□ 0.13
SNU13-208ENST00000488571 CARD14Q9BXL6 1004 aa15.87■□□□□ 0.13
SNU13-208ENST00000488571 EMILIN1Q9Y6C2 1016 aa15.87■□□□□ 0.13
SNU13-208ENST00000488571 UBR3Q6ZT12 1888 aa15.86■□□□□ 0.13
SNU13-208ENST00000488571 GIGYF1O75420 1035 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms