RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 SYTL4Q96C24 671 aaPredicted RBP15.65■□□□□ 0.1
NIPAL3-207ENST00000488155 ANKRD26Q9UPS8 1709 aa15.65■□□□□ 0.1
NIPAL3-207ENST00000488155 SMG6Q86US8 1419 aaKnown RBP15.64■□□□□ 0.09
NIPAL3-207ENST00000488155 ZCRB1Q8TBF4 217 aaKnown RBP15.64■□□□□ 0.09
NIPAL3-207ENST00000488155 STK32BQ9NY57 414 aa15.64■□□□□ 0.09
NIPAL3-207ENST00000488155 FLT4P35916 1363 aa15.63■□□□□ 0.09
NIPAL3-207ENST00000488155 SPON1Q9HCB6 807 aa15.63■□□□□ 0.09
NIPAL3-207ENST00000488155 PPP1R1BQ9UD71 204 aaPredicted RBP15.63■□□□□ 0.09
NIPAL3-207ENST00000488155 INSRP06213 1382 aa15.62■□□□□ 0.09
NIPAL3-207ENST00000488155 ITGB4P16144 1822 aa15.62■□□□□ 0.09
NIPAL3-207ENST00000488155 ZBTB7AO95365 584 aa15.62■□□□□ 0.09
NIPAL3-207ENST00000488155 TNNT2P45379 298 aaPredicted RBP15.62■□□□□ 0.09
NIPAL3-207ENST00000488155 RAPGEF4Q8WZA2 1011 aa15.62■□□□□ 0.09
NIPAL3-207ENST00000488155 PRIM1P49642 420 aaKnown RBP15.61■□□□□ 0.09
NIPAL3-207ENST00000488155 SLC15A2Q16348 729 aa15.61■□□□□ 0.09
NIPAL3-207ENST00000488155 CGNL1Q0VF96 1302 aa15.61■□□□□ 0.09
NIPAL3-207ENST00000488155 TUBGCP6Q96RT7 1819 aa15.61■□□□□ 0.09
NIPAL3-207ENST00000488155 TATP17735 454 aaPredicted RBP15.6■□□□□ 0.09
NIPAL3-207ENST00000488155 KCNQ4P56696 695 aa15.6■□□□□ 0.09
NIPAL3-207ENST00000488155 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
NIPAL3-207ENST00000488155 LY75O60449 1722 aa15.6■□□□□ 0.09
NIPAL3-207ENST00000488155 PANK3Q9H999 370 aa15.59■□□□□ 0.09
NIPAL3-207ENST00000488155 LRRC4BQ9NT99 713 aa15.59■□□□□ 0.09
NIPAL3-207ENST00000488155 PAPPAQ13219 1627 aa15.58■□□□□ 0.09
NIPAL3-207ENST00000488155 KIF24Q5T7B8 1368 aa15.57■□□□□ 0.08
NIPAL3-207ENST00000488155 ZNF827Q17R98 1081 aa15.56■□□□□ 0.08
NIPAL3-207ENST00000488155 POLKQ9UBT6 870 aa15.56■□□□□ 0.08
NIPAL3-207ENST00000488155 PKD1L3Q7Z443 1732 aa15.55■□□□□ 0.08
NIPAL3-207ENST00000488155 TOGARAM1Q9Y4F4 1720 aa15.55■□□□□ 0.08
NIPAL3-207ENST00000488155 NSD2O96028 1365 aa15.55■□□□□ 0.08
NIPAL3-207ENST00000488155 WASHC2AQ641Q2 1341 aa15.55■□□□□ 0.08
NIPAL3-207ENST00000488155 TAF1LQ8IZX4 1826 aa15.54■□□□□ 0.08
NIPAL3-207ENST00000488155 EYA1Q99502 592 aa15.54■□□□□ 0.08
NIPAL3-207ENST00000488155 QSER1Q2KHR3 1735 aa15.54■□□□□ 0.08
NIPAL3-207ENST00000488155 PCDH11XQ9BZA7 1347 aa15.53■□□□□ 0.08
NIPAL3-207ENST00000488155 PCDH11YQ9BZA8 1340 aa15.53■□□□□ 0.08
NIPAL3-207ENST00000488155 CYP27B1O15528 508 aa15.53■□□□□ 0.08
NIPAL3-207ENST00000488155 PTGER2P43116 358 aa15.52■□□□□ 0.08
NIPAL3-207ENST00000488155 SLC27A3Q5K4L6 730 aa15.52■□□□□ 0.08
NIPAL3-207ENST00000488155 MPRIPQ6WCQ1 1025 aa15.52■□□□□ 0.08
NIPAL3-207ENST00000488155 CCNL1Q9UK58 526 aaPredicted RBP15.52■□□□□ 0.08
NIPAL3-207ENST00000488155 EIF4A2Q14240 407 aaKnown RBP15.51■□□□□ 0.07
NIPAL3-207ENST00000488155 AKT1S1Q96B36 256 aa15.51■□□□□ 0.07
NIPAL3-207ENST00000488155 MTFR1LQ9H019 292 aa15.51■□□□□ 0.07
NIPAL3-207ENST00000488155 MORC1Q86VD1 984 aa15.5■□□□□ 0.07
NIPAL3-207ENST00000488155 TFCP2L1Q9NZI6 479 aa15.5■□□□□ 0.07
NIPAL3-207ENST00000488155 C5P01031 1676 aa15.5■□□□□ 0.07
NIPAL3-207ENST00000488155 KNSTRNQ9Y448 316 aa15.49■□□□□ 0.07
NIPAL3-207ENST00000488155 NCAPD2Q15021 1401 aa15.49■□□□□ 0.07
NIPAL3-207ENST00000488155 SPG7Q9UQ90 795 aa15.48■□□□□ 0.07
NIPAL3-207ENST00000488155 KIF7Q2M1P5 1343 aa15.47■□□□□ 0.07
NIPAL3-207ENST00000488155 PNPLA7Q6ZV29 1317 aa15.47■□□□□ 0.07
NIPAL3-207ENST00000488155 FHDC1Q9C0D6 1143 aaPredicted RBP15.47■□□□□ 0.07
NIPAL3-207ENST00000488155 VIRMAQ69YN4 1812 aaKnown RBP15.47■□□□□ 0.07
NIPAL3-207ENST00000488155 DCAF8L1A6NGE4 600 aa15.46■□□□□ 0.07
NIPAL3-207ENST00000488155 MSH5O43196 834 aa15.46■□□□□ 0.07
NIPAL3-207ENST00000488155 CNGB1Q14028 1251 aaPredicted RBP15.46■□□□□ 0.07
NIPAL3-207ENST00000488155 SGIP1Q9BQI5 828 aa15.46■□□□□ 0.07
NIPAL3-207ENST00000488155 CHD4Q14839 1912 aa15.46■□□□□ 0.07
NIPAL3-207ENST00000488155 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
NIPAL3-207ENST00000488155 PIGBQ92521 554 aa15.45■□□□□ 0.06
NIPAL3-207ENST00000488155 ARXQ96QS3 562 aa15.45■□□□□ 0.06
NIPAL3-207ENST00000488155 PALLDQ8WX93 1383 aa15.45■□□□□ 0.06
NIPAL3-207ENST00000488155 IFNL2Q8IZJ0 200 aa15.44■□□□□ 0.06
NIPAL3-207ENST00000488155 SYT17Q9BSW7 474 aa15.44■□□□□ 0.06
NIPAL3-207ENST00000488155 UBR3Q6ZT12 1888 aa15.44■□□□□ 0.06
NIPAL3-207ENST00000488155 COL24A1Q17RW2 1714 aa15.43■□□□□ 0.06
NIPAL3-207ENST00000488155 PHKG2P15735 406 aa15.43■□□□□ 0.06
NIPAL3-207ENST00000488155 NKX1-1Q15270 411 aaPredicted RBP15.43■□□□□ 0.06
NIPAL3-207ENST00000488155 IGSF1Q8N6C5 1336 aa15.43■□□□□ 0.06
NIPAL3-207ENST00000488155 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
NIPAL3-207ENST00000488155 COL23A1Q86Y22 540 aaPredicted RBP15.42■□□□□ 0.06
NIPAL3-207ENST00000488155 AEBP1Q8IUX7 1158 aa15.42■□□□□ 0.06
NIPAL3-207ENST00000488155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.42■□□□□ 0.06
NIPAL3-207ENST00000488155 TMOD3Q9NYL9 352 aa15.42■□□□□ 0.06
NIPAL3-207ENST00000488155 C4BP0C0L5 1744 aa15.42■□□□□ 0.06
NIPAL3-207ENST00000488155 YY1P25490 414 aa15.41■□□□□ 0.06
NIPAL3-207ENST00000488155 CC2D1BQ5T0F9 858 aaKnown RBP15.41■□□□□ 0.06
NIPAL3-207ENST00000488155 SLC16A10Q8TF71 515 aa15.41■□□□□ 0.06
NIPAL3-207ENST00000488155 SMARCC1Q92922 1105 aaPredicted RBP15.41■□□□□ 0.06
NIPAL3-207ENST00000488155 POLD1P28340 1107 aa15.4■□□□□ 0.06
NIPAL3-207ENST00000488155 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
NIPAL3-207ENST00000488155 SMIM5Q71RC9 77 aa15.4■□□□□ 0.06
NIPAL3-207ENST00000488155 ASAP1Q9ULH1 1129 aa15.4■□□□□ 0.06
NIPAL3-207ENST00000488155 PLEKHO1Q53GL0 409 aaPredicted RBP15.39■□□□□ 0.05
NIPAL3-207ENST00000488155 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
NIPAL3-207ENST00000488155 ZNF530Q6P9A1 599 aaPredicted RBP15.39■□□□□ 0.05
NIPAL3-207ENST00000488155 PHF14O94880 888 aa15.38■□□□□ 0.05
NIPAL3-207ENST00000488155 AK7Q96M32 723 aa15.38■□□□□ 0.05
NIPAL3-207ENST00000488155 SCN11AQ9UI33 1791 aa15.38■□□□□ 0.05
NIPAL3-207ENST00000488155 MYH14Q7Z406 1995 aaKnown RBP15.37■□□□□ 0.05
NIPAL3-207ENST00000488155 LOC102724428A0A0B4J2F2 783 aa15.37■□□□□ 0.05
NIPAL3-207ENST00000488155 PER1O15534 1290 aaPredicted RBP15.37■□□□□ 0.05
NIPAL3-207ENST00000488155 IL13P35225 146 aa15.37■□□□□ 0.05
NIPAL3-207ENST00000488155 MTHFSP49914 203 aa15.37■□□□□ 0.05
NIPAL3-207ENST00000488155 SIK1P57059 783 aa15.37■□□□□ 0.05
NIPAL3-207ENST00000488155 ATG3Q9NT62 314 aa15.37■□□□□ 0.05
NIPAL3-207ENST00000488155 ATP6V1AP38606 617 aa15.36■□□□□ 0.05
NIPAL3-207ENST00000488155 AMIGO3Q86WK7 504 aa15.36■□□□□ 0.05
NIPAL3-207ENST00000488155 PELP1Q8IZL8 1130 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms