RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 NDUFB9Q9Y6M9 179 aa6.26□□□□□ -1.41
CDC42BPA-213ENST00000488131 TONSLQ96HA7 1378 aa6.26□□□□□ -1.41
CDC42BPA-213ENST00000488131 NR6A1Q15406 480 aa6.25□□□□□ -1.41
CDC42BPA-213ENST00000488131 NCOA1Q15788 1441 aa6.25□□□□□ -1.41
CDC42BPA-213ENST00000488131 LRRC9Q6ZRR7 1453 aa6.25□□□□□ -1.41
CDC42BPA-213ENST00000488131 CENPJQ9HC77 1338 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-213ENST00000488131 UACAQ9BZF9 1416 aa6.24□□□□□ -1.41
CDC42BPA-213ENST00000488131 SMPD1P17405 629 aa6.24□□□□□ -1.41
CDC42BPA-213ENST00000488131 PRKRIP1Q9H875 184 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-213ENST00000488131 TRIM32Q13049 653 aa6.23□□□□□ -1.41
CDC42BPA-213ENST00000488131 DCAF11Q8TEB1 546 aa6.23□□□□□ -1.41
CDC42BPA-213ENST00000488131 GLMNQ92990 594 aa6.23□□□□□ -1.41
CDC42BPA-213ENST00000488131 HIRIP3Q9BW71 556 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-213ENST00000488131 SERPINA10Q9UK55 444 aa6.23□□□□□ -1.41
CDC42BPA-213ENST00000488131 VAC14Q08AM6 782 aa6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 HSP90AA2PQ14568 343 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 CCDC184Q52MB2 194 aa6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 DESI1Q6ICB0 168 aa6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 LYPD8Q6UX82 237 aa6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 USB1Q9BQ65 265 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 PRM3Q9NNZ6 103 aa6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 PHLDB1Q86UU1 1377 aa6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 MMP16P51512 607 aa6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 XP32Q5T750 250 aa6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 CCDC97Q96F63 343 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 RRAGDQ9NQL2 400 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-213ENST00000488131 CCDC18Q5T9S5 1454 aa6.21□□□□□ -1.41
CDC42BPA-213ENST00000488131 CCDC7Q96M83 1385 aa6.21□□□□□ -1.42
CDC42BPA-213ENST00000488131 PTPN23Q9H3S7 1636 aa6.21□□□□□ -1.42
CDC42BPA-213ENST00000488131 H3BM21 787 aa6.21□□□□□ -1.42
CDC42BPA-213ENST00000488131 HDGFL1Q5TGJ6 251 aa6.21□□□□□ -1.42
CDC42BPA-213ENST00000488131 CALR3Q96L12 384 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-213ENST00000488131 MRGPRX2Q96LB1 330 aa6.21□□□□□ -1.42
CDC42BPA-213ENST00000488131 MRS2Q9HD23 443 aa6.21□□□□□ -1.42
CDC42BPA-213ENST00000488131 HFM1A2PYH4 1435 aa6.21□□□□□ -1.42
CDC42BPA-213ENST00000488131 HECW1Q76N89 1606 aa6.21□□□□□ -1.42
CDC42BPA-213ENST00000488131 GSK3AP49840 483 aa6.2□□□□□ -1.42
CDC42BPA-213ENST00000488131 WNT7BP56706 349 aa6.2□□□□□ -1.42
CDC42BPA-213ENST00000488131 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
CDC42BPA-213ENST00000488131 PRDM9Q9NQV7 894 aa6.2□□□□□ -1.42
CDC42BPA-213ENST00000488131 VIRMAQ69YN4 1812 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 RNF225M0QZC1 329 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 GDF11O95390 407 aa6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 IGHA1P01876 353 aa6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 HSP90AA1P07900 732 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 CALD1Q05682 793 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 NPM2Q86SE8 214 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 F12P00748 615 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 L1TD1Q5T7N2 865 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 WWC1Q8IX03 1113 aa6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 CCDC24Q8N4L8 307 aa6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 ALG2Q9H553 416 aa6.19□□□□□ -1.42
CDC42BPA-213ENST00000488131 DXOO77932 396 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-213ENST00000488131 AAMPQ13685 434 aa6.18□□□□□ -1.42
CDC42BPA-213ENST00000488131 WASHC4Q2M389 1173 aa6.18□□□□□ -1.42
CDC42BPA-213ENST00000488131 RC3H1Q5TC82 1133 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-213ENST00000488131 MAP10Q9P2G4 905 aa6.18□□□□□ -1.42
CDC42BPA-213ENST00000488131 J3QL48 77 aa6.17□□□□□ -1.42
CDC42BPA-213ENST00000488131 HSPA5P11021 654 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-213ENST00000488131 FAM9BQ8IZU0 186 aa6.17□□□□□ -1.42
CDC42BPA-213ENST00000488131 PNNQ9H307 717 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-213ENST00000488131 JUNDP17535 347 aa6.17□□□□□ -1.42
CDC42BPA-213ENST00000488131 RRP1P56182 461 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-213ENST00000488131 RASSF7Q02833 373 aa6.17□□□□□ -1.42
CDC42BPA-213ENST00000488131 PCF11O94913 1555 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-213ENST00000488131 GCC2Q8IWJ2 1684 aa6.16□□□□□ -1.42
CDC42BPA-213ENST00000488131 MYOM3Q5VTT5 1437 aa6.16□□□□□ -1.42
CDC42BPA-213ENST00000488131 SPATA31E1Q6ZUB1 1445 aa6.16□□□□□ -1.42
CDC42BPA-213ENST00000488131 FGD1P98174 961 aa6.16□□□□□ -1.42
CDC42BPA-213ENST00000488131 HPS1Q92902 700 aa6.16□□□□□ -1.42
CDC42BPA-213ENST00000488131 UCN2Q96RP3 112 aa6.16□□□□□ -1.42
CDC42BPA-213ENST00000488131 PRDM4Q9UKN5 801 aa6.16□□□□□ -1.42
CDC42BPA-213ENST00000488131 LRPPRCP42704 1394 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-213ENST00000488131 DHX29Q7Z478 1369 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-213ENST00000488131 FRAT2O75474 233 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-213ENST00000488131 EIF4G2P78344 907 aaKnown RBP eCLIP6.15□□□□□ -1.42
CDC42BPA-213ENST00000488131 SRPK2P78362 688 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-213ENST00000488131 RBM10P98175 930 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-213ENST00000488131 CFAP70Q5T0N1 1121 aa6.15□□□□□ -1.42
CDC42BPA-213ENST00000488131 TPM2P07951 284 aa6.15□□□□□ -1.43
CDC42BPA-213ENST00000488131 FBXO45P0C2W1 286 aa6.15□□□□□ -1.43
CDC42BPA-213ENST00000488131 PTPRNQ16849 979 aa6.15□□□□□ -1.43
CDC42BPA-213ENST00000488131 NAP1L5Q96NT1 182 aaPredicted RBP6.15□□□□□ -1.43
CDC42BPA-213ENST00000488131 PDCL3Q9H2J4 239 aa6.15□□□□□ -1.43
CDC42BPA-213ENST00000488131 WASF2Q9Y6W5 498 aa6.15□□□□□ -1.43
CDC42BPA-213ENST00000488131 ZMYM4Q5VZL5 1548 aa6.15□□□□□ -1.43
CDC42BPA-213ENST00000488131 MIA2Q96PC5 1412 aa6.15□□□□□ -1.43
CDC42BPA-213ENST00000488131 AQRO60306 1485 aaKnown RBP eCLIP6.14□□□□□ -1.436e-6■□□□□ 10.4
CDC42BPA-213ENST00000488131 FYCO1Q9BQS8 1478 aa6.14□□□□□ -1.43
CDC42BPA-213ENST00000488131 ALDH1A1P00352 501 aa6.14□□□□□ -1.43
CDC42BPA-213ENST00000488131 OCSTAMPQ9BR26 566 aa6.14□□□□□ -1.43
CDC42BPA-213ENST00000488131 FKBPLQ9UIM3 349 aa6.14□□□□□ -1.43
CDC42BPA-213ENST00000488131 NAIPQ13075 1403 aa6.14□□□□□ -1.43
CDC42BPA-213ENST00000488131 FGD6Q6ZV73 1430 aa6.14□□□□□ -1.43
CDC42BPA-213ENST00000488131 ERBB4Q15303 1308 aa6.14□□□□□ -1.43
CDC42BPA-213ENST00000488131 DENND4BO75064 1496 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-213ENST00000488131 CUX1P39880 1505 aa6.13□□□□□ -1.43
CDC42BPA-213ENST00000488131 FSD2A1L4K1 749 aa6.13□□□□□ -1.43
CDC42BPA-213ENST00000488131 PPP1R12CQ9BZL4 782 aa6.13□□□□□ -1.43
CDC42BPA-213ENST00000488131 EVA1BQ9NVM1 165 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms