RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 TNS2Q63HR2 1409 aa23.1■■□□□ 1.29
SHROOM1-205ENST00000488072 CCDC184Q52MB2 194 aa23.09■■□□□ 1.29
SHROOM1-205ENST00000488072 ZCRB1Q8TBF4 217 aaKnown RBP23.09■■□□□ 1.29
SHROOM1-205ENST00000488072 RGPD1P0DJD0 1748 aa23.08■■□□□ 1.29
SHROOM1-205ENST00000488072 MYBBP1AQ9BQG0 1328 aaKnown RBP23.07■■□□□ 1.28
SHROOM1-205ENST00000488072 CYP27B1O15528 508 aa23.06■■□□□ 1.28
SHROOM1-205ENST00000488072 ACSBG1Q96GR2 724 aa23.06■■□□□ 1.28
SHROOM1-205ENST00000488072 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
SHROOM1-205ENST00000488072 TRIM37O94972 964 aa23.05■■□□□ 1.28
SHROOM1-205ENST00000488072 KCNQ2O43526 872 aa23.04■■□□□ 1.28
SHROOM1-205ENST00000488072 SHANK3Q9BYB0 1731 aa23.03■■□□□ 1.28
SHROOM1-205ENST00000488072 FAM196AQ6ZSG2 479 aa23.03■■□□□ 1.28
SHROOM1-205ENST00000488072 KDRP35968 1356 aa23.02■■□□□ 1.28
SHROOM1-205ENST00000488072 U2AF1L5P0DN76 240 aaPredicted RBP23.01■■□□□ 1.27
SHROOM1-205ENST00000488072 U2AF1Q01081 240 aaKnown RBP eCLIP23.01■■□□□ 1.27
SHROOM1-205ENST00000488072 DEFB132Q7Z7B7 95 aa23.01■■□□□ 1.27
SHROOM1-205ENST00000488072 PHACTR3Q96KR7 559 aa22.99■■□□□ 1.27
SHROOM1-205ENST00000488072 RSPH6AQ9H0K4 717 aa22.98■■□□□ 1.27
SHROOM1-205ENST00000488072 EP400Q96L91 3159 aa22.98■■□□□ 1.27
SHROOM1-205ENST00000488072 ANP32CO43423 234 aa22.97■■□□□ 1.27
SHROOM1-205ENST00000488072 PRKAR2BP31323 418 aa22.97■■□□□ 1.27
SHROOM1-205ENST00000488072 SPG7Q9UQ90 795 aa22.97■■□□□ 1.27
SHROOM1-205ENST00000488072 PHKG2P15735 406 aa22.96■■□□□ 1.27
SHROOM1-205ENST00000488072 MTHFSDQ2M296 383 aaKnown RBP22.96■■□□□ 1.27
SHROOM1-205ENST00000488072 PLEKHO1Q53GL0 409 aaPredicted RBP22.96■■□□□ 1.27
SHROOM1-205ENST00000488072 ZNF530Q6P9A1 599 aaPredicted RBP22.96■■□□□ 1.27
SHROOM1-205ENST00000488072 NUDCQ9Y266 331 aa22.96■■□□□ 1.27
SHROOM1-205ENST00000488072 PKD1L3Q7Z443 1732 aa22.95■■□□□ 1.26
SHROOM1-205ENST00000488072 PCDH11XQ9BZA7 1347 aa22.95■■□□□ 1.26
SHROOM1-205ENST00000488072 PCDH11YQ9BZA8 1340 aa22.95■■□□□ 1.26
SHROOM1-205ENST00000488072 PRIM1P49642 420 aaKnown RBP22.94■■□□□ 1.26
SHROOM1-205ENST00000488072 EN1Q05925 392 aaPredicted RBP22.93■■□□□ 1.26
SHROOM1-205ENST00000488072 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.93■■□□□ 1.26
SHROOM1-205ENST00000488072 APBA3O96018 575 aa22.92■■□□□ 1.26
SHROOM1-205ENST00000488072 SYTL4Q96C24 671 aaPredicted RBP22.92■■□□□ 1.26
SHROOM1-205ENST00000488072 MPRIPQ6WCQ1 1025 aa22.91■■□□□ 1.26
SHROOM1-205ENST00000488072 IFNL2Q8IZJ0 200 aa22.91■■□□□ 1.26
SHROOM1-205ENST00000488072 BCL9O00512 1426 aa22.91■■□□□ 1.26
SHROOM1-205ENST00000488072 BCL11BQ9C0K0 894 aaPredicted RBP22.9■■□□□ 1.26
SHROOM1-205ENST00000488072 TNS1Q9HBL0 1735 aaKnown RBP22.89■■□□□ 1.26
SHROOM1-205ENST00000488072 SENP3-EIF4A1A0A087X0R7 540 aa22.89■■□□□ 1.25
SHROOM1-205ENST00000488072 NKX1-1Q15270 411 aaPredicted RBP22.89■■□□□ 1.25
SHROOM1-205ENST00000488072 EZH2Q15910 746 aaKnown RBP22.89■■□□□ 1.25
SHROOM1-205ENST00000488072 AMOTQ4VCS5 1084 aa22.89■■□□□ 1.25
SHROOM1-205ENST00000488072 CCDC146Q8IYE0 955 aa22.89■■□□□ 1.25
SHROOM1-205ENST00000488072 LGR6Q9HBX8 967 aa22.89■■□□□ 1.25
SHROOM1-205ENST00000488072 KDM6AO15550 1401 aaPredicted RBP22.89■■□□□ 1.25
SHROOM1-205ENST00000488072 SBF2Q86WG5 1849 aa22.89■■□□□ 1.25
SHROOM1-205ENST00000488072 TOGARAM1Q9Y4F4 1720 aa22.88■■□□□ 1.25
SHROOM1-205ENST00000488072 PLEKHF1Q96S99 279 aa22.88■■□□□ 1.25
SHROOM1-205ENST00000488072 ADAMTS8Q9UP79 889 aa22.88■■□□□ 1.25
SHROOM1-205ENST00000488072 FCHSD2O94868 740 aa22.87■■□□□ 1.25
SHROOM1-205ENST00000488072 SF3B2Q13435 895 aaKnown RBP22.87■■□□□ 1.25
SHROOM1-205ENST00000488072 DOT1LQ8TEK3 1739 aa22.87■■□□□ 1.25
SHROOM1-205ENST00000488072 CCDC125Q86Z20 511 aa22.85■■□□□ 1.25
SHROOM1-205ENST00000488072 CAMKK2Q96RR4 588 aa22.85■■□□□ 1.25
SHROOM1-205ENST00000488072 MRS2Q9HD23 443 aa22.85■■□□□ 1.25
SHROOM1-205ENST00000488072 C1orf141Q5JVX7 400 aa22.84■■□□□ 1.25
SHROOM1-205ENST00000488072 DIEXFQ68CQ4 756 aaKnown RBP22.84■■□□□ 1.25
SHROOM1-205ENST00000488072 PROM2Q8N271 834 aa22.84■■□□□ 1.25
SHROOM1-205ENST00000488072 PIGBQ92521 554 aa22.84■■□□□ 1.25
SHROOM1-205ENST00000488072 NHSQ6T4R5 1651 aa22.84■■□□□ 1.25
SHROOM1-205ENST00000488072 BAG6P46379 1132 aa22.83■■□□□ 1.25
SHROOM1-205ENST00000488072 KCNQ4P56696 695 aa22.83■■□□□ 1.25
SHROOM1-205ENST00000488072 AKAP4Q5JQC9 854 aa22.83■■□□□ 1.25
SHROOM1-205ENST00000488072 DCTN1Q14203 1278 aa22.82■■□□□ 1.24
SHROOM1-205ENST00000488072 WDR43Q15061 677 aaKnown RBP eCLIP22.82■■□□□ 1.24
SHROOM1-205ENST00000488072 RNMTO43148 476 aaKnown RBP22.81■■□□□ 1.24
SHROOM1-205ENST00000488072 IL17REQ8NFR9 667 aa22.81■■□□□ 1.24
SHROOM1-205ENST00000488072 RRP7AQ9Y3A4 280 aaKnown RBP22.81■■□□□ 1.24
SHROOM1-205ENST00000488072 KAT6BQ8WYB5 2073 aa22.81■■□□□ 1.24
SHROOM1-205ENST00000488072 PNISRQ8TF01 805 aaKnown RBP22.8■■□□□ 1.24
SHROOM1-205ENST00000488072 DCAF5Q96JK2 942 aa22.8■■□□□ 1.24
SHROOM1-205ENST00000488072 PLEKHG2Q9H7P9 1386 aa22.79■■□□□ 1.24
SHROOM1-205ENST00000488072 MIER1Q8N108 512 aa22.79■■□□□ 1.24
SHROOM1-205ENST00000488072 GAS2L2Q8NHY3 880 aa22.79■■□□□ 1.24
SHROOM1-205ENST00000488072 BTAF1O14981 1849 aa22.78■■□□□ 1.24
SHROOM1-205ENST00000488072 MCM10Q7L590 875 aa22.78■■□□□ 1.24
SHROOM1-205ENST00000488072 ASAP1Q9ULH1 1129 aa22.78■■□□□ 1.24
SHROOM1-205ENST00000488072 MAP3K5Q99683 1374 aa22.77■■□□□ 1.24
SHROOM1-205ENST00000488072 NFATC2IPQ8NCF5 419 aa22.77■■□□□ 1.24
SHROOM1-205ENST00000488072 THUMPD2Q9BTF0 503 aaKnown RBP22.77■■□□□ 1.24
SHROOM1-205ENST00000488072 TMOD3Q9NYL9 352 aa22.77■■□□□ 1.24
SHROOM1-205ENST00000488072 GNAT3A8MTJ3 354 aa22.76■■□□□ 1.23
SHROOM1-205ENST00000488072 HSP90AB1P08238 724 aaKnown RBP22.76■■□□□ 1.23
SHROOM1-205ENST00000488072 CABP4P57796 275 aa22.76■■□□□ 1.23
SHROOM1-205ENST00000488072 PLSCR1O15162 318 aa22.75■■□□□ 1.23
SHROOM1-205ENST00000488072 NFE2L2Q16236 605 aa22.75■■□□□ 1.23
SHROOM1-205ENST00000488072 TXNRD1Q16881 649 aa22.75■■□□□ 1.23
SHROOM1-205ENST00000488072 ATG3Q9NT62 314 aa22.75■■□□□ 1.23
SHROOM1-205ENST00000488072 LRRC4BQ9NT99 713 aa22.75■■□□□ 1.23
SHROOM1-205ENST00000488072 ITGB4P16144 1822 aa22.74■■□□□ 1.23
SHROOM1-205ENST00000488072 ERVV-2B6SEH9 535 aa22.74■■□□□ 1.23
SHROOM1-205ENST00000488072 NEUROD2Q15784 382 aa22.74■■□□□ 1.23
SHROOM1-205ENST00000488072 SLC39A6Q13433 755 aa22.73■■□□□ 1.23
SHROOM1-205ENST00000488072 MAPK8IP3Q9UPT6 1336 aa22.73■■□□□ 1.23
SHROOM1-205ENST00000488072 TMPOP42166 694 aaKnown RBP22.72■■□□□ 1.23
SHROOM1-205ENST00000488072 FAM9BQ8IZU0 186 aa22.72■■□□□ 1.23
SHROOM1-205ENST00000488072 RUNDC1Q96C34 613 aa22.72■■□□□ 1.23
SHROOM1-205ENST00000488072 SLC52A2Q9HAB3 445 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms