RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 PTGDRQ13258 359 aa9.21□□□□□ -0.94
NECTIN3-208ENST00000486596 IRX2Q9BZI1 471 aaPredicted RBP9.21□□□□□ -0.94
NECTIN3-208ENST00000486596 NUP155O75694 1391 aa9.21□□□□□ -0.94
NECTIN3-208ENST00000486596 ROCK1Q13464 1354 aa9.21□□□□□ -0.94
NECTIN3-208ENST00000486596 CDK12Q9NYV4 1490 aaPredicted RBP9.21□□□□□ -0.94
NECTIN3-208ENST00000486596 TESPA1A2RU30 521 aaPredicted RBP9.2□□□□□ -0.94
NECTIN3-208ENST00000486596 RXRBP28702 533 aa9.2□□□□□ -0.94
NECTIN3-208ENST00000486596 RBM26Q5T8P6 1007 aaKnown RBP9.2□□□□□ -0.94
NECTIN3-208ENST00000486596 NECTIN2Q92692 538 aa9.2□□□□□ -0.94
NECTIN3-208ENST00000486596 DDX17Q92841 729 aaKnown RBP9.2□□□□□ -0.94
NECTIN3-208ENST00000486596 AFF2P51816 1311 aa9.2□□□□□ -0.94
NECTIN3-208ENST00000486596 METP08581 1390 aa9.2□□□□□ -0.94
NECTIN3-208ENST00000486596 RGS12O14924 1447 aa9.2□□□□□ -0.94
NECTIN3-208ENST00000486596 NALCNQ8IZF0 1738 aa9.19□□□□□ -0.94
NECTIN3-208ENST00000486596 IL21Q9HBE4 155 aa9.19□□□□□ -0.94
NECTIN3-208ENST00000486596 SPHKAPQ2M3C7 1700 aa9.19□□□□□ -0.94
NECTIN3-208ENST00000486596 RNF40O75150 1001 aa9.18□□□□□ -0.94
NECTIN3-208ENST00000486596 APLP1P51693 650 aa9.18□□□□□ -0.94
NECTIN3-208ENST00000486596 NEXMIFQ5QGS0 1516 aa9.18□□□□□ -0.94
NECTIN3-208ENST00000486596 SWT1Q5T5J6 900 aaKnown RBP9.18□□□□□ -0.94
NECTIN3-208ENST00000486596 SLF2Q8IX21 1173 aa9.18□□□□□ -0.94
NECTIN3-208ENST00000486596 PNPLA6Q8IY17 1366 aa9.18□□□□□ -0.94
NECTIN3-208ENST00000486596 MTRQ99707 1265 aa9.18□□□□□ -0.94
NECTIN3-208ENST00000486596 ADGRL3Q9HAR2 1447 aa9.18□□□□□ -0.94
NECTIN3-208ENST00000486596 C8orf37Q96NL8 207 aa9.17□□□□□ -0.94
NECTIN3-208ENST00000486596 CLTCL1P53675 1640 aa9.16□□□□□ -0.94
NECTIN3-208ENST00000486596 ITGAEP38570 1179 aa9.16□□□□□ -0.94
NECTIN3-208ENST00000486596 LRRC59Q96AG4 307 aaKnown RBP9.16□□□□□ -0.94
NECTIN3-208ENST00000486596 FCHSD2O94868 740 aa9.15□□□□□ -0.94
NECTIN3-208ENST00000486596 ZNF326Q5BKZ1 582 aaKnown RBP9.15□□□□□ -0.94
NECTIN3-208ENST00000486596 C1orf167Q5SNV9 1468 aa9.15□□□□□ -0.95
NECTIN3-208ENST00000486596 LAMC1P11047 1609 aa9.14□□□□□ -0.95
NECTIN3-208ENST00000486596 RBM6P78332 1123 aaKnown RBP9.14□□□□□ -0.95
NECTIN3-208ENST00000486596 QTRT2Q9H974 415 aaKnown RBP9.14□□□□□ -0.95
NECTIN3-208ENST00000486596 PTCH1Q13635 1447 aa9.14□□□□□ -0.95
NECTIN3-208ENST00000486596 TULP1O00294 542 aaPredicted RBP9.13□□□□□ -0.95
NECTIN3-208ENST00000486596 ADAMTS2O95450 1211 aa9.13□□□□□ -0.95
NECTIN3-208ENST00000486596 FAM161AQ3B820 660 aa9.13□□□□□ -0.95
NECTIN3-208ENST00000486596 ZNF516Q92618 1163 aa9.13□□□□□ -0.95
NECTIN3-208ENST00000486596 ADGRG1Q9Y653 693 aa9.13□□□□□ -0.95
NECTIN3-208ENST00000486596 ROBO2Q9HCK4 1378 aa9.12□□□□□ -0.95
NECTIN3-208ENST00000486596 DNAJB2P25686 324 aa9.12□□□□□ -0.95
NECTIN3-208ENST00000486596 RBM46Q8TBY0 533 aaKnown RBP9.12□□□□□ -0.95
NECTIN3-208ENST00000486596 ORAI2Q96SN7 254 aa9.12□□□□□ -0.95
NECTIN3-208ENST00000486596 SOS2Q07890 1332 aaPredicted RBP9.11□□□□□ -0.95
NECTIN3-208ENST00000486596 SLC4A3P48751 1232 aa9.11□□□□□ -0.95
NECTIN3-208ENST00000486596 PPP1R18Q6NYC8 613 aa9.11□□□□□ -0.95
NECTIN3-208ENST00000486596 PPARGC1BQ86YN6 1023 aaKnown RBP9.11□□□□□ -0.95
NECTIN3-208ENST00000486596 NGLY1Q96IV0 654 aa9.11□□□□□ -0.95
NECTIN3-208ENST00000486596 TMEM134Q9H6X4 195 aa9.11□□□□□ -0.95
NECTIN3-208ENST00000486596 PRAG1Q86YV5 1406 aa9.11□□□□□ -0.95
NECTIN3-208ENST00000486596 COL22A1Q8NFW1 1626 aaPredicted RBP9.1□□□□□ -0.95
NECTIN3-208ENST00000486596 PRR14Q9BWN1 585 aa9.1□□□□□ -0.95
NECTIN3-208ENST00000486596 MYOM2P54296 1465 aa9.09□□□□□ -0.95
NECTIN3-208ENST00000486596 GPIHBP1Q8IV16 184 aa9.09□□□□□ -0.95
NECTIN3-208ENST00000486596 USP21Q9UK80 565 aa9.09□□□□□ -0.95
NECTIN3-208ENST00000486596 SRCAPQ6ZRS2 3230 aa9.09□□□□□ -0.95
NECTIN3-208ENST00000486596 ATAD2Q6PL18 1390 aa9.09□□□□□ -0.95
NECTIN3-208ENST00000486596 KIF1BO60333 1816 aa9.08□□□□□ -0.96
NECTIN3-208ENST00000486596 ATRNO75882 1429 aa9.08□□□□□ -0.96
NECTIN3-208ENST00000486596 NAIPQ13075 1403 aa9.08□□□□□ -0.96
NECTIN3-208ENST00000486596 HIC1Q14526 733 aa9.08□□□□□ -0.96
NECTIN3-208ENST00000486596 FNBP4Q8N3X1 1017 aaPredicted RBP9.08□□□□□ -0.96
NECTIN3-208ENST00000486596 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.08□□□□□ -0.96
NECTIN3-208ENST00000486596 PXDNQ92626 1479 aa9.08□□□□□ -0.96
NECTIN3-208ENST00000486596 CDC42BPGQ6DT37 1551 aa9.07□□□□□ -0.96
NECTIN3-208ENST00000486596 RCCD1A6NED2 376 aa9.07□□□□□ -0.96
NECTIN3-208ENST00000486596 NKX2-3Q8TAU0 364 aa9.07□□□□□ -0.96
NECTIN3-208ENST00000486596 TRPC5Q9UL62 973 aaPredicted RBP9.07□□□□□ -0.96
NECTIN3-208ENST00000486596 V9GY48 417 aaPredicted RBP9.07□□□□□ -0.96
NECTIN3-208ENST00000486596 BCL9LQ86UU0 1499 aa9.07□□□□□ -0.96
NECTIN3-208ENST00000486596 HFM1A2PYH4 1435 aa9.06□□□□□ -0.96
NECTIN3-208ENST00000486596 GNPATO15228 680 aa9.06□□□□□ -0.96
NECTIN3-208ENST00000486596 ZPR1O75312 459 aa9.06□□□□□ -0.96
NECTIN3-208ENST00000486596 FECHP22830 423 aa9.06□□□□□ -0.96
NECTIN3-208ENST00000486596 LAPTM4AQ15012 233 aa9.06□□□□□ -0.96
NECTIN3-208ENST00000486596 PPLO60437 1756 aa9.06□□□□□ -0.96
NECTIN3-208ENST00000486596 RRBP1Q9P2E9 1410 aaKnown RBP9.05□□□□□ -0.96
NECTIN3-208ENST00000486596 COPS2P61201 443 aa9.05□□□□□ -0.96
NECTIN3-208ENST00000486596 XPCQ01831 940 aaPredicted RBP9.05□□□□□ -0.96
NECTIN3-208ENST00000486596 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
NECTIN3-208ENST00000486596 PRKD2Q9BZL6 878 aa9.05□□□□□ -0.96
NECTIN3-208ENST00000486596 EP400Q96L91 3159 aa9.05□□□□□ -0.96
NECTIN3-208ENST00000486596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.04□□□□□ -0.96
NECTIN3-208ENST00000486596 ESCO1Q5FWF5 840 aa9.04□□□□□ -0.96
NECTIN3-208ENST00000486596 PXYLP1Q8TE99 480 aa9.04□□□□□ -0.96
NECTIN3-208ENST00000486596 PCDHB3Q9Y5E6 796 aa9.04□□□□□ -0.96
NECTIN3-208ENST00000486596 MARF1Q9Y4F3 1742 aaKnown RBP9.04□□□□□ -0.96
NECTIN3-208ENST00000486596 NPHP3Q7Z494 1330 aa9.04□□□□□ -0.96
NECTIN3-208ENST00000486596 GLI3P10071 1580 aa9.03□□□□□ -0.96
NECTIN3-208ENST00000486596 FOXO3O43524 673 aa9.03□□□□□ -0.96
NECTIN3-208ENST00000486596 ACTN4O43707 911 aaKnown RBP9.03□□□□□ -0.96
NECTIN3-208ENST00000486596 OATP04181 439 aa9.03□□□□□ -0.96
NECTIN3-208ENST00000486596 RPGRIP1LQ68CZ1 1315 aa9.03□□□□□ -0.96
NECTIN3-208ENST00000486596 PLEKHH1Q9ULM0 1364 aa9.02□□□□□ -0.97
NECTIN3-208ENST00000486596 GGCXP38435 758 aa9.02□□□□□ -0.97
NECTIN3-208ENST00000486596 WAPLQ7Z5K2 1190 aa9.02□□□□□ -0.97
NECTIN3-208ENST00000486596 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
NECTIN3-208ENST00000486596 TECPR2O15040 1411 aa9.02□□□□□ -0.97
NECTIN3-208ENST00000486596 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms