RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 APBA3O96018 575 aa12.14□□□□□ -0.47
COL12A1-208ENST00000486533 DDB1Q16531 1140 aa12.14□□□□□ -0.47
COL12A1-208ENST00000486533 TSHZ2Q9NRE2 1034 aa12.14□□□□□ -0.47
COL12A1-208ENST00000486533 ABCC6O95255 1503 aa12.14□□□□□ -0.47
COL12A1-208ENST00000486533 CCDC7Q96M83 1385 aa12.14□□□□□ -0.47
COL12A1-208ENST00000486533 EZH2Q15910 746 aaKnown RBP12.13□□□□□ -0.47
COL12A1-208ENST00000486533 OVOS2A0A0G2JMS6 1433 aa12.13□□□□□ -0.47
COL12A1-208ENST00000486533 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
COL12A1-208ENST00000486533 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
COL12A1-208ENST00000486533 TMF1P82094 1093 aa12.13□□□□□ -0.47
COL12A1-208ENST00000486533 CARD10Q9BWT7 1032 aa12.13□□□□□ -0.47
COL12A1-208ENST00000486533 WASHC2AQ641Q2 1341 aa12.12□□□□□ -0.47
COL12A1-208ENST00000486533 C11orf95C9JLR9 678 aaPredicted RBP12.12□□□□□ -0.47
COL12A1-208ENST00000486533 CDCA7Q9BWT1 371 aaPredicted RBP12.12□□□□□ -0.47
COL12A1-208ENST00000486533 CLCN6P51797 869 aa12.11□□□□□ -0.47
COL12A1-208ENST00000486533 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
COL12A1-208ENST00000486533 CAMKK2Q96RR4 588 aa12.11□□□□□ -0.47
COL12A1-208ENST00000486533 PARD3Q8TEW0 1356 aa12.11□□□□□ -0.47
COL12A1-208ENST00000486533 ERBB3P21860 1342 aa12.11□□□□□ -0.47
COL12A1-208ENST00000486533 PEAK1Q9H792 1746 aa12.1□□□□□ -0.47
COL12A1-208ENST00000486533 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
COL12A1-208ENST00000486533 R3HDM1Q15032 1099 aaKnown RBP12.1□□□□□ -0.47
COL12A1-208ENST00000486533 COG3Q96JB2 828 aa12.1□□□□□ -0.47
COL12A1-208ENST00000486533 NLRP2Q9NX02 1062 aa12.1□□□□□ -0.47
COL12A1-208ENST00000486533 ANKRD36BQ8N2N9 1353 aa12.1□□□□□ -0.47
COL12A1-208ENST00000486533 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
COL12A1-208ENST00000486533 EXOC5O00471 708 aa12.09□□□□□ -0.47
COL12A1-208ENST00000486533 CDCA8Q53HL2 280 aa12.09□□□□□ -0.47
COL12A1-208ENST00000486533 ANKRD24Q8TF21 1146 aa12.09□□□□□ -0.47
COL12A1-208ENST00000486533 RREB1Q92766 1687 aa12.08□□□□□ -0.48
COL12A1-208ENST00000486533 MARCH10Q8NA82 808 aaPredicted RBP12.08□□□□□ -0.48
COL12A1-208ENST00000486533 NUP188Q5SRE5 1749 aa12.07□□□□□ -0.48
COL12A1-208ENST00000486533 LRP5O75197 1615 aa12.07□□□□□ -0.48
COL12A1-208ENST00000486533 TNS2Q63HR2 1409 aa12.07□□□□□ -0.48
COL12A1-208ENST00000486533 LTV1Q96GA3 475 aaPredicted RBP12.06□□□□□ -0.48
COL12A1-208ENST00000486533 IL2RBP14784 551 aa12.05□□□□□ -0.48
COL12A1-208ENST00000486533 NBPF14Q5TI25 921 aa12.05□□□□□ -0.48
COL12A1-208ENST00000486533 IP6K1Q92551 441 aa12.05□□□□□ -0.48
COL12A1-208ENST00000486533 BCL11BQ9C0K0 894 aaPredicted RBP12.05□□□□□ -0.48
COL12A1-208ENST00000486533 GGNBP2Q9H3C7 697 aa12.05□□□□□ -0.48
COL12A1-208ENST00000486533 MAP3K19Q56UN5 1328 aa12.05□□□□□ -0.48
COL12A1-208ENST00000486533 ZBED9Q6R2W3 1325 aa12.05□□□□□ -0.48
COL12A1-208ENST00000486533 FAM208AQ9UK61 1670 aaKnown RBP12.05□□□□□ -0.48
COL12A1-208ENST00000486533 FBLN1P23142 703 aa12.05□□□□□ -0.48
COL12A1-208ENST00000486533 AMPHP49418 695 aa12.05□□□□□ -0.48
COL12A1-208ENST00000486533 PTF1AQ7RTS3 328 aa12.05□□□□□ -0.48
COL12A1-208ENST00000486533 PRKRIP1Q9H875 184 aaPredicted RBP12.05□□□□□ -0.48
COL12A1-208ENST00000486533 KIF20BQ96Q89 1820 aa12.04□□□□□ -0.48
COL12A1-208ENST00000486533 MYOM1P52179 1685 aa12.04□□□□□ -0.48
COL12A1-208ENST00000486533 BCL9O00512 1426 aa12.04□□□□□ -0.48
COL12A1-208ENST00000486533 FYB1O15117 783 aa12.04□□□□□ -0.48
COL12A1-208ENST00000486533 RGPD3A6NKT7 1758 aaPredicted RBP12.04□□□□□ -0.48
COL12A1-208ENST00000486533 RGPD4Q7Z3J3 1758 aa12.04□□□□□ -0.48
COL12A1-208ENST00000486533 KAT6BQ8WYB5 2073 aa12.03□□□□□ -0.48
COL12A1-208ENST00000486533 PLSCR1O15162 318 aa12.03□□□□□ -0.48
COL12A1-208ENST00000486533 HOXC9P31274 260 aa12.03□□□□□ -0.48
COL12A1-208ENST00000486533 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
COL12A1-208ENST00000486533 RRS1Q15050 365 aaKnown RBP12.02□□□□□ -0.49
COL12A1-208ENST00000486533 ANP32EQ9BTT0 268 aa12.02□□□□□ -0.49
COL12A1-208ENST00000486533 MRS2Q9HD23 443 aa12.02□□□□□ -0.49
COL12A1-208ENST00000486533 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
COL12A1-208ENST00000486533 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
COL12A1-208ENST00000486533 RTL1A6NKG5 1358 aa12.01□□□□□ -0.49
COL12A1-208ENST00000486533 NSD3Q9BZ95 1437 aa12.01□□□□□ -0.49
COL12A1-208ENST00000486533 RGPD2P0DJD1 1756 aa12.01□□□□□ -0.49
COL12A1-208ENST00000486533 KCNQ2O43526 872 aa12.01□□□□□ -0.49
COL12A1-208ENST00000486533 PPP4R2Q9NY27 417 aa12.01□□□□□ -0.49
COL12A1-208ENST00000486533 KIF7Q2M1P5 1343 aa12□□□□□ -0.49
COL12A1-208ENST00000486533 NHSQ6T4R5 1651 aa12□□□□□ -0.49
COL12A1-208ENST00000486533 SMG6Q86US8 1419 aaKnown RBP11.99□□□□□ -0.49
COL12A1-208ENST00000486533 DDX54Q8TDD1 881 aaKnown RBP11.99□□□□□ -0.49
COL12A1-208ENST00000486533 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
COL12A1-208ENST00000486533 TXNRD1Q16881 649 aa11.98□□□□□ -0.49
COL12A1-208ENST00000486533 ANO8Q9HCE9 1232 aaPredicted RBP11.98□□□□□ -0.49
COL12A1-208ENST00000486533 BTAF1O14981 1849 aa11.97□□□□□ -0.49
COL12A1-208ENST00000486533 FLT4P35916 1363 aa11.97□□□□□ -0.49
COL12A1-208ENST00000486533 CGNL1Q0VF96 1302 aa11.97□□□□□ -0.49
COL12A1-208ENST00000486533 HSP90AB2PQ58FF8 381 aa11.96□□□□□ -0.49
COL12A1-208ENST00000486533 NBPF6Q5VWK0 638 aa11.96□□□□□ -0.49
COL12A1-208ENST00000486533 USHBP1Q8N6Y0 703 aa11.96□□□□□ -0.49
COL12A1-208ENST00000486533 NBPF4Q96M43 638 aa11.96□□□□□ -0.49
COL12A1-208ENST00000486533 MEGF6O75095 1541 aa11.96□□□□□ -0.49
COL12A1-208ENST00000486533 PPM1GO15355 546 aaPredicted RBP11.96□□□□□ -0.5
COL12A1-208ENST00000486533 ZCRB1Q8TBF4 217 aaKnown RBP11.96□□□□□ -0.5
COL12A1-208ENST00000486533 INSRP06213 1382 aa11.95□□□□□ -0.5
COL12A1-208ENST00000486533 KIF24Q5T7B8 1368 aa11.95□□□□□ -0.5
COL12A1-208ENST00000486533 RAPGEF4Q8WZA2 1011 aa11.95□□□□□ -0.5
COL12A1-208ENST00000486533 SYTL4Q96C24 671 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-208ENST00000486533 SPON1Q9HCB6 807 aa11.95□□□□□ -0.5
COL12A1-208ENST00000486533 STK32BQ9NY57 414 aa11.95□□□□□ -0.5
COL12A1-208ENST00000486533 RBM19Q9Y4C8 960 aaKnown RBP11.95□□□□□ -0.5
COL12A1-208ENST00000486533 EMILIN1Q9Y6C2 1016 aa11.95□□□□□ -0.5
COL12A1-208ENST00000486533 SHANK3Q9BYB0 1731 aa11.94□□□□□ -0.5
COL12A1-208ENST00000486533 GALR2O43603 387 aaPredicted RBP11.94□□□□□ -0.5
COL12A1-208ENST00000486533 PHF12Q96QT6 1004 aa11.94□□□□□ -0.5
COL12A1-208ENST00000486533 PPP1R1BQ9UD71 204 aaPredicted RBP11.94□□□□□ -0.5
COL12A1-208ENST00000486533 DOT1LQ8TEK3 1739 aa11.94□□□□□ -0.5
COL12A1-208ENST00000486533 FANCIQ9NVI1 1328 aa11.93□□□□□ -0.5
COL12A1-208ENST00000486533 FAM9BQ8IZU0 186 aa11.93□□□□□ -0.5
COL12A1-208ENST00000486533 MAP2P11137 1827 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms