RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 USHBP1Q8N6Y0 703 aa30.21■■■□□ 2.43
HLA-F-228ENST00000486194 WASHC2AQ641Q2 1341 aa30.2■■■□□ 2.42
HLA-F-228ENST00000486194 NSD2O96028 1365 aa30.19■■■□□ 2.42
HLA-F-228ENST00000486194 POLKQ9UBT6 870 aa30.17■■■□□ 2.42
HLA-F-228ENST00000486194 ANKRD26Q9UPS8 1709 aa30.16■■■□□ 2.42
HLA-F-228ENST00000486194 ANO8Q9HCE9 1232 aaPredicted RBP30.16■■■□□ 2.42
HLA-F-228ENST00000486194 STK32BQ9NY57 414 aa30.16■■■□□ 2.42
HLA-F-228ENST00000486194 BTAF1O14981 1849 aa30.13■■■□□ 2.41
HLA-F-228ENST00000486194 TNNT2P45379 298 aaPredicted RBP30.13■■■□□ 2.41
HLA-F-228ENST00000486194 SYTL4Q96C24 671 aaPredicted RBP30.13■■■□□ 2.41
HLA-F-228ENST00000486194 SPON1Q9HCB6 807 aa30.13■■■□□ 2.41
HLA-F-228ENST00000486194 KNSTRNQ9Y448 316 aa30.13■■■□□ 2.41
HLA-F-228ENST00000486194 PCDH11XQ9BZA7 1347 aa30.13■■■□□ 2.41
HLA-F-228ENST00000486194 PCDH11YQ9BZA8 1340 aa30.13■■■□□ 2.41
HLA-F-228ENST00000486194 PRIM1P49642 420 aaKnown RBP30.11■■■□□ 2.41
HLA-F-228ENST00000486194 SHANK3Q9BYB0 1731 aa30.1■■■□□ 2.41
HLA-F-228ENST00000486194 MAP2P11137 1827 aaKnown RBP30.1■■■□□ 2.41
HLA-F-228ENST00000486194 SLC15A2Q16348 729 aa30.1■■■□□ 2.41
HLA-F-228ENST00000486194 NCAPD2Q15021 1401 aa30.1■■■□□ 2.41
HLA-F-228ENST00000486194 KIF7Q2M1P5 1343 aa30.09■■■□□ 2.41
HLA-F-228ENST00000486194 KAT6BQ8WYB5 2073 aa30.08■■■□□ 2.41
HLA-F-228ENST00000486194 SLC27A3Q5K4L6 730 aa30.08■■■□□ 2.41
HLA-F-228ENST00000486194 MORC1Q86VD1 984 aa30.08■■■□□ 2.41
HLA-F-228ENST00000486194 DOT1LQ8TEK3 1739 aa30.06■■■□□ 2.4
HLA-F-228ENST00000486194 EYA1Q99502 592 aa30.06■■■□□ 2.4
HLA-F-228ENST00000486194 SPG7Q9UQ90 795 aa30.05■■■□□ 2.4
HLA-F-228ENST00000486194 EIF4A2Q14240 407 aaKnown RBP30.03■■■□□ 2.4
HLA-F-228ENST00000486194 PPP1R1BQ9UD71 204 aaPredicted RBP30.03■■■□□ 2.4
HLA-F-228ENST00000486194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.02■■■□□ 2.4
HLA-F-228ENST00000486194 CASZ1Q86V15 1759 aa30.01■■■□□ 2.39
HLA-F-228ENST00000486194 LRRC4BQ9NT99 713 aa30.01■■■□□ 2.39
HLA-F-228ENST00000486194 CYP27B1O15528 508 aa30■■■□□ 2.39
HLA-F-228ENST00000486194 PLEKHG2Q9H7P9 1386 aa30■■■□□ 2.39
HLA-F-228ENST00000486194 PAPPAQ13219 1627 aa30■■■□□ 2.39
HLA-F-228ENST00000486194 PKD1L3Q7Z443 1732 aa29.99■■■□□ 2.39
HLA-F-228ENST00000486194 HMGB2P26583 209 aaKnown RBP29.98■■■□□ 2.39
HLA-F-228ENST00000486194 AMER1Q5JTC6 1135 aaPredicted RBP29.97■■■□□ 2.39
HLA-F-228ENST00000486194 ZBTB7AO95365 584 aa29.96■■■□□ 2.39
HLA-F-228ENST00000486194 PDGFDQ9GZP0 370 aaPredicted RBP29.96■■■□□ 2.39
HLA-F-228ENST00000486194 NKX1-1Q15270 411 aaPredicted RBP29.95■■■□□ 2.39
HLA-F-228ENST00000486194 IGSF1Q8N6C5 1336 aa29.95■■■□□ 2.38
HLA-F-228ENST00000486194 MTFR1LQ9H019 292 aa29.94■■■□□ 2.38
HLA-F-228ENST00000486194 CCNL1Q9UK58 526 aaPredicted RBP29.94■■■□□ 2.38
HLA-F-228ENST00000486194 ZNF827Q17R98 1081 aa29.93■■■□□ 2.38
HLA-F-228ENST00000486194 AKT1S1Q96B36 256 aa29.93■■■□□ 2.38
HLA-F-228ENST00000486194 LY75O60449 1722 aa29.92■■■□□ 2.38
HLA-F-228ENST00000486194 MPRIPQ6WCQ1 1025 aa29.92■■■□□ 2.38
HLA-F-228ENST00000486194 IFNL2Q8IZJ0 200 aa29.92■■■□□ 2.38
HLA-F-228ENST00000486194 PER1O15534 1290 aaPredicted RBP29.9■■■□□ 2.38
HLA-F-228ENST00000486194 SMARCC1Q92922 1105 aaPredicted RBP29.9■■■□□ 2.38
HLA-F-228ENST00000486194 ATF5Q9Y2D1 282 aaPredicted RBP29.9■■■□□ 2.38
HLA-F-228ENST00000486194 TFCP2L1Q9NZI6 479 aa29.89■■■□□ 2.38
HLA-F-228ENST00000486194 PHKG2P15735 406 aa29.88■■■□□ 2.37
HLA-F-228ENST00000486194 PALLDQ8WX93 1383 aa29.88■■■□□ 2.37
HLA-F-228ENST00000486194 PTGER2P43116 358 aa29.87■■■□□ 2.37
HLA-F-228ENST00000486194 KCNQ4P56696 695 aa29.87■■■□□ 2.37
HLA-F-228ENST00000486194 SLC16A10Q8TF71 515 aa29.87■■■□□ 2.37
HLA-F-228ENST00000486194 PLEKHO1Q53GL0 409 aaPredicted RBP29.86■■■□□ 2.37
HLA-F-228ENST00000486194 AMOTQ4VCS5 1084 aa29.85■■■□□ 2.37
HLA-F-228ENST00000486194 TMOD3Q9NYL9 352 aa29.84■■■□□ 2.37
HLA-F-228ENST00000486194 TOGARAM1Q9Y4F4 1720 aa29.84■■■□□ 2.37
HLA-F-228ENST00000486194 NPC1L1Q9UHC9 1359 aa29.83■■■□□ 2.37
HLA-F-228ENST00000486194 HSP90AB1P08238 724 aaKnown RBP29.83■■■□□ 2.37
HLA-F-228ENST00000486194 PIGBQ92521 554 aa29.83■■■□□ 2.37
HLA-F-228ENST00000486194 QSER1Q2KHR3 1735 aa29.82■■■□□ 2.36
HLA-F-228ENST00000486194 DCAF8L1A6NGE4 600 aa29.82■■■□□ 2.36
HLA-F-228ENST00000486194 CC2D1BQ5T0F9 858 aaKnown RBP29.82■■■□□ 2.36
HLA-F-228ENST00000486194 PNPLA7Q6ZV29 1317 aa29.81■■■□□ 2.36
HLA-F-228ENST00000486194 IL13P35225 146 aa29.81■■■□□ 2.36
HLA-F-228ENST00000486194 MTHFSP49914 203 aa29.81■■■□□ 2.36
HLA-F-228ENST00000486194 SGIP1Q9BQI5 828 aa29.8■■■□□ 2.36
HLA-F-228ENST00000486194 ITGB4P16144 1822 aa29.8■■■□□ 2.36
HLA-F-228ENST00000486194 SULT6B1Q6IMI4 303 aa29.79■■■□□ 2.36
HLA-F-228ENST00000486194 DCAF5Q96JK2 942 aa29.78■■■□□ 2.36
HLA-F-228ENST00000486194 KDRP35968 1356 aa29.77■■■□□ 2.36
HLA-F-228ENST00000486194 ZNF530Q6P9A1 599 aaPredicted RBP29.77■■■□□ 2.36
HLA-F-228ENST00000486194 AEBP1Q8IUX7 1158 aa29.77■■■□□ 2.36
HLA-F-228ENST00000486194 ERVV-2B6SEH9 535 aa29.76■■■□□ 2.35
HLA-F-228ENST00000486194 POLD1P28340 1107 aa29.75■■■□□ 2.35
HLA-F-228ENST00000486194 C1orf141Q5JVX7 400 aa29.75■■■□□ 2.35
HLA-F-228ENST00000486194 FLAD1Q8NFF5 587 aa29.75■■■□□ 2.35
HLA-F-228ENST00000486194 ARXQ96QS3 562 aa29.75■■■□□ 2.35
HLA-F-228ENST00000486194 C5P01031 1676 aa29.75■■■□□ 2.35
HLA-F-228ENST00000486194 LOC102724428A0A0B4J2F2 783 aa29.72■■■□□ 2.35
HLA-F-228ENST00000486194 MSH5O43196 834 aa29.72■■■□□ 2.35
HLA-F-228ENST00000486194 SIK1P57059 783 aa29.72■■■□□ 2.35
HLA-F-228ENST00000486194 FHDC1Q9C0D6 1143 aaPredicted RBP29.72■■■□□ 2.35
HLA-F-228ENST00000486194 DIAPH1O60610 1272 aaKnown RBP29.71■■■□□ 2.35
HLA-F-228ENST00000486194 ASAP1Q9ULH1 1129 aa29.71■■■□□ 2.35
HLA-F-228ENST00000486194 AK7Q96M32 723 aa29.7■■■□□ 2.35
HLA-F-228ENST00000486194 SYT17Q9BSW7 474 aa29.7■■■□□ 2.35
HLA-F-228ENST00000486194 TUBGCP6Q96RT7 1819 aa29.7■■■□□ 2.34
HLA-F-228ENST00000486194 COL23A1Q86Y22 540 aaPredicted RBP29.69■■■□□ 2.34
HLA-F-228ENST00000486194 CABP4P57796 275 aa29.68■■■□□ 2.34
HLA-F-228ENST00000486194 ATG3Q9NT62 314 aa29.68■■■□□ 2.34
HLA-F-228ENST00000486194 MAP3K5Q99683 1374 aa29.67■■■□□ 2.34
HLA-F-228ENST00000486194 TAF1LQ8IZX4 1826 aa29.67■■■□□ 2.34
HLA-F-228ENST00000486194 CNGB1Q14028 1251 aaPredicted RBP29.67■■■□□ 2.34
HLA-F-228ENST00000486194 C4BP0C0L5 1744 aa29.66■■■□□ 2.34
HLA-F-228ENST00000486194 KDM6AO15550 1401 aaPredicted RBP29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms