RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 ZCRB1Q8TBF4 217 aaKnown RBP31.67■■■□□ 2.66
ABCF3-216ENST00000485921 HMOX1P09601 288 aa31.66■■■□□ 2.66
ABCF3-216ENST00000485921 KDRP35968 1356 aa31.66■■■□□ 2.66
ABCF3-216ENST00000485921 MARCH10Q8NA82 808 aaPredicted RBP31.64■■■□□ 2.66
ABCF3-216ENST00000485921 U2AF1L5P0DN76 240 aaPredicted RBP31.62■■■□□ 2.65
ABCF3-216ENST00000485921 U2AF1Q01081 240 aaKnown RBP eCLIP31.62■■■□□ 2.65
ABCF3-216ENST00000485921 DDX54Q8TDD1 881 aaKnown RBP31.61■■■□□ 2.65
ABCF3-216ENST00000485921 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.6■■■□□ 2.65
ABCF3-216ENST00000485921 SPG7Q9UQ90 795 aa31.6■■■□□ 2.65
ABCF3-216ENST00000485921 FAM196AQ6ZSG2 479 aa31.59■■■□□ 2.65
ABCF3-216ENST00000485921 PLEKHG2Q9H7P9 1386 aa31.57■■■□□ 2.64
ABCF3-216ENST00000485921 PLEKHO1Q53GL0 409 aaPredicted RBP31.57■■■□□ 2.64
ABCF3-216ENST00000485921 PCDH11XQ9BZA7 1347 aa31.56■■■□□ 2.64
ABCF3-216ENST00000485921 PCDH11YQ9BZA8 1340 aa31.56■■■□□ 2.64
ABCF3-216ENST00000485921 DIEXFQ68CQ4 756 aaKnown RBP31.55■■■□□ 2.64
ABCF3-216ENST00000485921 AMOTQ4VCS5 1084 aa31.54■■■□□ 2.64
ABCF3-216ENST00000485921 RSPH6AQ9H0K4 717 aa31.54■■■□□ 2.64
ABCF3-216ENST00000485921 PKD1L3Q7Z443 1732 aa31.54■■■□□ 2.64
ABCF3-216ENST00000485921 SHANK3Q9BYB0 1731 aa31.53■■■□□ 2.64
ABCF3-216ENST00000485921 FCHSD2O94868 740 aa31.53■■■□□ 2.64
ABCF3-216ENST00000485921 CYP27B1O15528 508 aa31.52■■■□□ 2.64
ABCF3-216ENST00000485921 CCDC184Q52MB2 194 aa31.52■■■□□ 2.64
ABCF3-216ENST00000485921 EP400Q96L91 3159 aa31.51■■■□□ 2.64
ABCF3-216ENST00000485921 PRKAR2BP31323 418 aa31.51■■■□□ 2.63
ABCF3-216ENST00000485921 BCL9O00512 1426 aa31.49■■■□□ 2.63
ABCF3-216ENST00000485921 UPF1Q92900 1129 aaKnown RBP eCLIP31.49■■■□□ 2.63
ABCF3-216ENST00000485921 WDR43Q15061 677 aaKnown RBP eCLIP31.48■■■□□ 2.63
ABCF3-216ENST00000485921 ZNF530Q6P9A1 599 aaPredicted RBP31.48■■■□□ 2.63
ABCF3-216ENST00000485921 IFNL2Q8IZJ0 200 aa31.48■■■□□ 2.63
ABCF3-216ENST00000485921 SOCS7O14512 581 aa31.47■■■□□ 2.63
ABCF3-216ENST00000485921 PHKG2P15735 406 aa31.47■■■□□ 2.63
ABCF3-216ENST00000485921 TRIM37O94972 964 aa31.46■■■□□ 2.63
ABCF3-216ENST00000485921 MRS2Q9HD23 443 aa31.46■■■□□ 2.63
ABCF3-216ENST00000485921 MTHFSDQ2M296 383 aaKnown RBP31.45■■■□□ 2.63
ABCF3-216ENST00000485921 PHACTR3Q96KR7 559 aa31.44■■■□□ 2.62
ABCF3-216ENST00000485921 NKX1-1Q15270 411 aaPredicted RBP31.43■■■□□ 2.62
ABCF3-216ENST00000485921 C1orf141Q5JVX7 400 aa31.43■■■□□ 2.62
ABCF3-216ENST00000485921 ACSBG1Q96GR2 724 aa31.43■■■□□ 2.62
ABCF3-216ENST00000485921 PNNQ9H307 717 aaKnown RBP31.43■■■□□ 2.62
ABCF3-216ENST00000485921 CCDC125Q86Z20 511 aa31.42■■■□□ 2.62
ABCF3-216ENST00000485921 ADAMTS8Q9UP79 889 aa31.42■■■□□ 2.62
ABCF3-216ENST00000485921 NEFMP07197 916 aa31.4■■■□□ 2.62
ABCF3-216ENST00000485921 GAS2L2Q8NHY3 880 aa31.4■■■□□ 2.62
ABCF3-216ENST00000485921 PLEKHF1Q96S99 279 aa31.4■■■□□ 2.62
ABCF3-216ENST00000485921 KCNQ2O43526 872 aa31.39■■■□□ 2.62
ABCF3-216ENST00000485921 HSP90AB1P08238 724 aaKnown RBP31.39■■■□□ 2.62
ABCF3-216ENST00000485921 SF3B2Q13435 895 aaKnown RBP31.39■■■□□ 2.62
ABCF3-216ENST00000485921 AKAP4Q5JQC9 854 aa31.39■■■□□ 2.62
ABCF3-216ENST00000485921 BCL11BQ9C0K0 894 aaPredicted RBP31.39■■■□□ 2.62
ABCF3-216ENST00000485921 SBF2Q86WG5 1849 aa31.39■■■□□ 2.62
ABCF3-216ENST00000485921 PRIM1P49642 420 aaKnown RBP31.37■■■□□ 2.61
ABCF3-216ENST00000485921 PTF1AQ7RTS3 328 aa31.37■■■□□ 2.61
ABCF3-216ENST00000485921 PNISRQ8TF01 805 aaKnown RBP31.36■■■□□ 2.61
ABCF3-216ENST00000485921 DCAF5Q96JK2 942 aa31.36■■■□□ 2.61
ABCF3-216ENST00000485921 SYTL4Q96C24 671 aaPredicted RBP31.35■■■□□ 2.61
ABCF3-216ENST00000485921 KAT6BQ8WYB5 2073 aa31.35■■■□□ 2.61
ABCF3-216ENST00000485921 MAPK8IP3Q9UPT6 1336 aa31.34■■■□□ 2.61
ABCF3-216ENST00000485921 MPRIPQ6WCQ1 1025 aa31.34■■■□□ 2.61
ABCF3-216ENST00000485921 CCDC146Q8IYE0 955 aa31.33■■■□□ 2.61
ABCF3-216ENST00000485921 DOT1LQ8TEK3 1739 aa31.32■■■□□ 2.61
ABCF3-216ENST00000485921 NHSQ6T4R5 1651 aa31.32■■■□□ 2.6
ABCF3-216ENST00000485921 APBA3O96018 575 aa31.32■■■□□ 2.6
ABCF3-216ENST00000485921 KDM6AO15550 1401 aaPredicted RBP31.31■■■□□ 2.6
ABCF3-216ENST00000485921 MAP3K5Q99683 1374 aa31.3■■■□□ 2.6
ABCF3-216ENST00000485921 GNAT3A8MTJ3 354 aa31.3■■■□□ 2.6
ABCF3-216ENST00000485921 CCER2I3L3R5 266 aa31.3■■■□□ 2.6
ABCF3-216ENST00000485921 MIER1Q8N108 512 aa31.3■■■□□ 2.6
ABCF3-216ENST00000485921 RUNDC1Q96C34 613 aa31.3■■■□□ 2.6
ABCF3-216ENST00000485921 TNS1Q9HBL0 1735 aaKnown RBP31.29■■■□□ 2.6
ABCF3-216ENST00000485921 ERVV-2B6SEH9 535 aa31.29■■■□□ 2.6
ABCF3-216ENST00000485921 TOGARAM1Q9Y4F4 1720 aa31.29■■■□□ 2.6
ABCF3-216ENST00000485921 BAG6P46379 1132 aa31.28■■■□□ 2.6
ABCF3-216ENST00000485921 LGR6Q9HBX8 967 aa31.28■■■□□ 2.6
ABCF3-216ENST00000485921 RNMTO43148 476 aaKnown RBP31.27■■■□□ 2.6
ABCF3-216ENST00000485921 NFE2L2Q16236 605 aa31.27■■■□□ 2.6
ABCF3-216ENST00000485921 DEFB132Q7Z7B7 95 aa31.27■■■□□ 2.6
ABCF3-216ENST00000485921 TMOD3Q9NYL9 352 aa31.26■■■□□ 2.59
ABCF3-216ENST00000485921 CABP4P57796 275 aa31.24■■■□□ 2.59
ABCF3-216ENST00000485921 EN1Q05925 392 aaPredicted RBP31.24■■■□□ 2.59
ABCF3-216ENST00000485921 PIGBQ92521 554 aa31.24■■■□□ 2.59
ABCF3-216ENST00000485921 IL17REQ8NFR9 667 aa31.23■■■□□ 2.59
ABCF3-216ENST00000485921 RTF1Q92541 710 aaKnown RBP31.23■■■□□ 2.59
ABCF3-216ENST00000485921 ITGB4P16144 1822 aa31.22■■■□□ 2.59
ABCF3-216ENST00000485921 FAM9BQ8IZU0 186 aa31.22■■■□□ 2.59
ABCF3-216ENST00000485921 BTAF1O14981 1849 aa31.21■■■□□ 2.59
ABCF3-216ENST00000485921 SCN11AQ9UI33 1791 aa31.21■■■□□ 2.59
ABCF3-216ENST00000485921 PLSCR1O15162 318 aa31.21■■■□□ 2.59
ABCF3-216ENST00000485921 HTATSF1O43719 755 aaKnown RBP31.21■■■□□ 2.59
ABCF3-216ENST00000485921 TMPOP42166 694 aaKnown RBP31.21■■■□□ 2.59
ABCF3-216ENST00000485921 NFATC2IPQ8NCF5 419 aa31.2■■■□□ 2.59
ABCF3-216ENST00000485921 RIPK4P57078 832 aa31.19■■■□□ 2.58
ABCF3-216ENST00000485921 CAMKK2Q96RR4 588 aa31.19■■■□□ 2.58
ABCF3-216ENST00000485921 SLC52A2Q9HAB3 445 aa31.19■■■□□ 2.58
ABCF3-216ENST00000485921 RRP7AQ9Y3A4 280 aaKnown RBP31.19■■■□□ 2.58
ABCF3-216ENST00000485921 EZH2Q15910 746 aaKnown RBP31.18■■■□□ 2.58
ABCF3-216ENST00000485921 ADAMTS7Q9UKP4 1686 aa31.18■■■□□ 2.58
ABCF3-216ENST00000485921 MCM10Q7L590 875 aa31.17■■■□□ 2.58
ABCF3-216ENST00000485921 APAF1O14727 1248 aa31.16■■■□□ 2.58
ABCF3-216ENST00000485921 DCTN1Q14203 1278 aa31.16■■■□□ 2.58
ABCF3-216ENST00000485921 NEUROD2Q15784 382 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms