RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 USHBP1Q8N6Y0 703 aa19■□□□□ 0.63
SCAF4-206ENST00000485790 INSRP06213 1382 aa19■□□□□ 0.63
SCAF4-206ENST00000485790 USP54Q70EL1 1684 aa19■□□□□ 0.63
SCAF4-206ENST00000485790 FLT4P35916 1363 aa18.99■□□□□ 0.63
SCAF4-206ENST00000485790 AKT1S1Q96B36 256 aa18.99■□□□□ 0.63
SCAF4-206ENST00000485790 SYT17Q9BSW7 474 aa18.99■□□□□ 0.63
SCAF4-206ENST00000485790 RGPD3A6NKT7 1758 aaPredicted RBP18.98■□□□□ 0.63
SCAF4-206ENST00000485790 RGPD4Q7Z3J3 1758 aa18.98■□□□□ 0.63
SCAF4-206ENST00000485790 POLD1P28340 1107 aa18.98■□□□□ 0.63
SCAF4-206ENST00000485790 EIF4G2P78344 907 aaKnown RBP eCLIP18.98■□□□□ 0.63
SCAF4-206ENST00000485790 FHDC1Q9C0D6 1143 aaPredicted RBP18.98■□□□□ 0.63
SCAF4-206ENST00000485790 CCNL1Q9UK58 526 aaPredicted RBP18.98■□□□□ 0.63
SCAF4-206ENST00000485790 SBF2Q86WG5 1849 aa18.97■□□□□ 0.63
SCAF4-206ENST00000485790 ZNF827Q17R98 1081 aa18.97■□□□□ 0.63
SCAF4-206ENST00000485790 CCER1Q8TC90 406 aaPredicted RBP18.97■□□□□ 0.63
SCAF4-206ENST00000485790 SPG7Q9UQ90 795 aa18.96■□□□□ 0.63
SCAF4-206ENST00000485790 PCDH11XQ9BZA7 1347 aa18.96■□□□□ 0.63
SCAF4-206ENST00000485790 PCDH11YQ9BZA8 1340 aa18.96■□□□□ 0.63
SCAF4-206ENST00000485790 EMILIN1Q9Y6C2 1016 aa18.95■□□□□ 0.62
SCAF4-206ENST00000485790 LTN1O94822 1766 aa18.94■□□□□ 0.62
SCAF4-206ENST00000485790 NSD3Q9BZ95 1437 aa18.94■□□□□ 0.62
SCAF4-206ENST00000485790 MSH5O43196 834 aa18.94■□□□□ 0.62
SCAF4-206ENST00000485790 SGIP1Q9BQI5 828 aa18.94■□□□□ 0.62
SCAF4-206ENST00000485790 WASHC2AQ641Q2 1341 aa18.94■□□□□ 0.62
SCAF4-206ENST00000485790 KCNQ4P56696 695 aa18.93■□□□□ 0.62
SCAF4-206ENST00000485790 MPRIPQ6WCQ1 1025 aa18.93■□□□□ 0.62
SCAF4-206ENST00000485790 SMARCC1Q92922 1105 aaPredicted RBP18.93■□□□□ 0.62
SCAF4-206ENST00000485790 WNK3Q9BYP7 1800 aa18.93■□□□□ 0.62
SCAF4-206ENST00000485790 FLAD1Q8NFF5 587 aa18.91■□□□□ 0.62
SCAF4-206ENST00000485790 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.91■□□□□ 0.621e-6■■□□□ 11.4
SCAF4-206ENST00000485790 NHSQ6T4R5 1651 aa18.91■□□□□ 0.62
SCAF4-206ENST00000485790 MEGF6O75095 1541 aa18.9■□□□□ 0.62
SCAF4-206ENST00000485790 POLKQ9UBT6 870 aa18.9■□□□□ 0.62
SCAF4-206ENST00000485790 CYP27B1O15528 508 aa18.89■□□□□ 0.61
SCAF4-206ENST00000485790 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
SCAF4-206ENST00000485790 KLHL34Q8N239 644 aa18.89■□□□□ 0.61
SCAF4-206ENST00000485790 EYA1Q99502 592 aa18.89■□□□□ 0.61
SCAF4-206ENST00000485790 PNPLA7Q6ZV29 1317 aa18.89■□□□□ 0.61
SCAF4-206ENST00000485790 HSPA5P11021 654 aaKnown RBP18.88■□□□□ 0.61
SCAF4-206ENST00000485790 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
SCAF4-206ENST00000485790 GPR162Q16538 588 aa18.88■□□□□ 0.61
SCAF4-206ENST00000485790 PANK3Q9H999 370 aa18.88■□□□□ 0.61
SCAF4-206ENST00000485790 FAM208AQ9UK61 1670 aaKnown RBP18.87■□□□□ 0.61
SCAF4-206ENST00000485790 NSD2O96028 1365 aa18.86■□□□□ 0.61
SCAF4-206ENST00000485790 IFNL2Q8IZJ0 200 aa18.86■□□□□ 0.61
SCAF4-206ENST00000485790 COL23A1Q86Y22 540 aaPredicted RBP18.85■□□□□ 0.61
SCAF4-206ENST00000485790 MAP3K5Q99683 1374 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 CASZ1Q86V15 1759 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 MORC1Q86VD1 984 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 PIGBQ92521 554 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 TMOD3Q9NYL9 352 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 KAT6BQ8WYB5 2073 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 AK7Q96M32 723 aa18.83■□□□□ 0.6
SCAF4-206ENST00000485790 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.6
SCAF4-206ENST00000485790 PALLDQ8WX93 1383 aa18.82■□□□□ 0.6
SCAF4-206ENST00000485790 EIF4A2Q14240 407 aaKnown RBP18.82■□□□□ 0.6
SCAF4-206ENST00000485790 BTAF1O14981 1849 aa18.81■□□□□ 0.6
SCAF4-206ENST00000485790 HSP90AB1P08238 724 aaKnown RBP18.81■□□□□ 0.6
SCAF4-206ENST00000485790 PLEKHO1Q53GL0 409 aaPredicted RBP18.81■□□□□ 0.6
SCAF4-206ENST00000485790 PELP1Q8IZL8 1130 aaKnown RBP18.81■□□□□ 0.6
SCAF4-206ENST00000485790 PHKG2P15735 406 aa18.8■□□□□ 0.6
SCAF4-206ENST00000485790 GRIN3BO60391 1043 aa18.79■□□□□ 0.6
SCAF4-206ENST00000485790 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
SCAF4-206ENST00000485790 LOC102724428A0A0B4J2F2 783 aa18.78■□□□□ 0.6
SCAF4-206ENST00000485790 SIK1P57059 783 aa18.78■□□□□ 0.6
SCAF4-206ENST00000485790 ERVV-2B6SEH9 535 aa18.77■□□□□ 0.6
SCAF4-206ENST00000485790 PAPPAQ13219 1627 aa18.76■□□□□ 0.59
SCAF4-206ENST00000485790 ATP6V1AP38606 617 aa18.76■□□□□ 0.59
SCAF4-206ENST00000485790 MSL1Q68DK7 614 aa18.76■□□□□ 0.59
SCAF4-206ENST00000485790 ZNF784Q8NCA9 323 aaPredicted RBP18.76■□□□□ 0.59
SCAF4-206ENST00000485790 DCAF5Q96JK2 942 aa18.76■□□□□ 0.59
SCAF4-206ENST00000485790 CD2APQ9Y5K6 639 aa18.76■□□□□ 0.59
SCAF4-206ENST00000485790 ASAP1Q9ULH1 1129 aa18.75■□□□□ 0.59
SCAF4-206ENST00000485790 MYOM1P52179 1685 aa18.74■□□□□ 0.59
SCAF4-206ENST00000485790 PLEKHG2Q9H7P9 1386 aa18.74■□□□□ 0.59
SCAF4-206ENST00000485790 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.74■□□□□ 0.59
SCAF4-206ENST00000485790 SSFA2P28290 1259 aa18.74■□□□□ 0.59
SCAF4-206ENST00000485790 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
SCAF4-206ENST00000485790 IGSF1Q8N6C5 1336 aa18.74■□□□□ 0.59
SCAF4-206ENST00000485790 PHF14O94880 888 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 MTHFSP49914 203 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 CABP4P57796 275 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 C1orf141Q5JVX7 400 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 NLGN2Q8NFZ4 835 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 ATG3Q9NT62 314 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 ZNF530Q6P9A1 599 aaPredicted RBP18.72■□□□□ 0.59
SCAF4-206ENST00000485790 TRAPPC3LQ5T215 181 aa18.71■□□□□ 0.59
SCAF4-206ENST00000485790 RBM42Q9BTD8 480 aaKnown RBP18.71■□□□□ 0.59
SCAF4-206ENST00000485790 RGPD2P0DJD1 1756 aa18.7■□□□□ 0.58
SCAF4-206ENST00000485790 KIF20BQ96Q89 1820 aa18.7■□□□□ 0.58
SCAF4-206ENST00000485790 GNPATO15228 680 aa18.7■□□□□ 0.58
SCAF4-206ENST00000485790 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
SCAF4-206ENST00000485790 LINC00116Q8NCU8 138 aa18.7■□□□□ 0.58
SCAF4-206ENST00000485790 DOT1LQ8TEK3 1739 aa18.69■□□□□ 0.58
SCAF4-206ENST00000485790 RTCBQ9Y3I0 505 aaKnown RBP18.69■□□□□ 0.58
SCAF4-206ENST00000485790 ITPK1Q13572 414 aa18.68■□□□□ 0.58
SCAF4-206ENST00000485790 RC3H1Q5TC82 1133 aaKnown RBP18.67■□□□□ 0.58
SCAF4-206ENST00000485790 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
SCAF4-206ENST00000485790 IL13P35225 146 aa18.66■□□□□ 0.58
SCAF4-206ENST00000485790 LY75O60449 1722 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms