RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 USHBP1Q8N6Y0 703 aa19■□□□□ 0.63
SCAF4-206ENST00000485790 INSRP06213 1382 aa19■□□□□ 0.63
SCAF4-206ENST00000485790 USP54Q70EL1 1684 aa19■□□□□ 0.63
SCAF4-206ENST00000485790 FLT4P35916 1363 aa18.99■□□□□ 0.63
SCAF4-206ENST00000485790 AKT1S1Q96B36 256 aa18.99■□□□□ 0.63
SCAF4-206ENST00000485790 SYT17Q9BSW7 474 aa18.99■□□□□ 0.63
SCAF4-206ENST00000485790 RGPD3A6NKT7 1758 aaPredicted RBP18.98■□□□□ 0.63
SCAF4-206ENST00000485790 RGPD4Q7Z3J3 1758 aa18.98■□□□□ 0.63
SCAF4-206ENST00000485790 POLD1P28340 1107 aa18.98■□□□□ 0.63
SCAF4-206ENST00000485790 EIF4G2P78344 907 aaKnown RBP eCLIP18.98■□□□□ 0.63
SCAF4-206ENST00000485790 FHDC1Q9C0D6 1143 aaPredicted RBP18.98■□□□□ 0.63
SCAF4-206ENST00000485790 CCNL1Q9UK58 526 aaPredicted RBP18.98■□□□□ 0.63
SCAF4-206ENST00000485790 SBF2Q86WG5 1849 aa18.97■□□□□ 0.63
SCAF4-206ENST00000485790 ZNF827Q17R98 1081 aa18.97■□□□□ 0.63
SCAF4-206ENST00000485790 CCER1Q8TC90 406 aaPredicted RBP18.97■□□□□ 0.63
SCAF4-206ENST00000485790 SPG7Q9UQ90 795 aa18.96■□□□□ 0.63
SCAF4-206ENST00000485790 PCDH11XQ9BZA7 1347 aa18.96■□□□□ 0.63
SCAF4-206ENST00000485790 PCDH11YQ9BZA8 1340 aa18.96■□□□□ 0.63
SCAF4-206ENST00000485790 EMILIN1Q9Y6C2 1016 aa18.95■□□□□ 0.62
SCAF4-206ENST00000485790 LTN1O94822 1766 aa18.94■□□□□ 0.62
SCAF4-206ENST00000485790 NSD3Q9BZ95 1437 aa18.94■□□□□ 0.62
SCAF4-206ENST00000485790 MSH5O43196 834 aa18.94■□□□□ 0.62
SCAF4-206ENST00000485790 SGIP1Q9BQI5 828 aa18.94■□□□□ 0.62
SCAF4-206ENST00000485790 WASHC2AQ641Q2 1341 aa18.94■□□□□ 0.62
SCAF4-206ENST00000485790 KCNQ4P56696 695 aa18.93■□□□□ 0.62
SCAF4-206ENST00000485790 MPRIPQ6WCQ1 1025 aa18.93■□□□□ 0.62
SCAF4-206ENST00000485790 SMARCC1Q92922 1105 aaPredicted RBP18.93■□□□□ 0.62
SCAF4-206ENST00000485790 WNK3Q9BYP7 1800 aa18.93■□□□□ 0.62
SCAF4-206ENST00000485790 FLAD1Q8NFF5 587 aa18.91■□□□□ 0.62
SCAF4-206ENST00000485790 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.91■□□□□ 0.621e-6■■□□□ 11.4
SCAF4-206ENST00000485790 NHSQ6T4R5 1651 aa18.91■□□□□ 0.62
SCAF4-206ENST00000485790 MEGF6O75095 1541 aa18.9■□□□□ 0.62
SCAF4-206ENST00000485790 POLKQ9UBT6 870 aa18.9■□□□□ 0.62
SCAF4-206ENST00000485790 CYP27B1O15528 508 aa18.89■□□□□ 0.61
SCAF4-206ENST00000485790 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
SCAF4-206ENST00000485790 KLHL34Q8N239 644 aa18.89■□□□□ 0.61
SCAF4-206ENST00000485790 EYA1Q99502 592 aa18.89■□□□□ 0.61
SCAF4-206ENST00000485790 PNPLA7Q6ZV29 1317 aa18.89■□□□□ 0.61
SCAF4-206ENST00000485790 HSPA5P11021 654 aaKnown RBP18.88■□□□□ 0.61
SCAF4-206ENST00000485790 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
SCAF4-206ENST00000485790 GPR162Q16538 588 aa18.88■□□□□ 0.61
SCAF4-206ENST00000485790 PANK3Q9H999 370 aa18.88■□□□□ 0.61
SCAF4-206ENST00000485790 FAM208AQ9UK61 1670 aaKnown RBP18.87■□□□□ 0.61
SCAF4-206ENST00000485790 NSD2O96028 1365 aa18.86■□□□□ 0.61
SCAF4-206ENST00000485790 IFNL2Q8IZJ0 200 aa18.86■□□□□ 0.61
SCAF4-206ENST00000485790 COL23A1Q86Y22 540 aaPredicted RBP18.85■□□□□ 0.61
SCAF4-206ENST00000485790 MAP3K5Q99683 1374 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 CASZ1Q86V15 1759 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 MORC1Q86VD1 984 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 PIGBQ92521 554 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 TMOD3Q9NYL9 352 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 KAT6BQ8WYB5 2073 aa18.84■□□□□ 0.61
SCAF4-206ENST00000485790 AK7Q96M32 723 aa18.83■□□□□ 0.6
SCAF4-206ENST00000485790 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.6
SCAF4-206ENST00000485790 PALLDQ8WX93 1383 aa18.82■□□□□ 0.6
SCAF4-206ENST00000485790 EIF4A2Q14240 407 aaKnown RBP18.82■□□□□ 0.6
SCAF4-206ENST00000485790 BTAF1O14981 1849 aa18.81■□□□□ 0.6
SCAF4-206ENST00000485790 HSP90AB1P08238 724 aaKnown RBP18.81■□□□□ 0.6
SCAF4-206ENST00000485790 PLEKHO1Q53GL0 409 aaPredicted RBP18.81■□□□□ 0.6
SCAF4-206ENST00000485790 PELP1Q8IZL8 1130 aaKnown RBP18.81■□□□□ 0.6
SCAF4-206ENST00000485790 PHKG2P15735 406 aa18.8■□□□□ 0.6
SCAF4-206ENST00000485790 GRIN3BO60391 1043 aa18.79■□□□□ 0.6
SCAF4-206ENST00000485790 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
SCAF4-206ENST00000485790 LOC102724428A0A0B4J2F2 783 aa18.78■□□□□ 0.6
SCAF4-206ENST00000485790 SIK1P57059 783 aa18.78■□□□□ 0.6
SCAF4-206ENST00000485790 ERVV-2B6SEH9 535 aa18.77■□□□□ 0.6
SCAF4-206ENST00000485790 PAPPAQ13219 1627 aa18.76■□□□□ 0.59
SCAF4-206ENST00000485790 ATP6V1AP38606 617 aa18.76■□□□□ 0.59
SCAF4-206ENST00000485790 MSL1Q68DK7 614 aa18.76■□□□□ 0.59
SCAF4-206ENST00000485790 ZNF784Q8NCA9 323 aaPredicted RBP18.76■□□□□ 0.59
SCAF4-206ENST00000485790 DCAF5Q96JK2 942 aa18.76■□□□□ 0.59
SCAF4-206ENST00000485790 CD2APQ9Y5K6 639 aa18.76■□□□□ 0.59
SCAF4-206ENST00000485790 ASAP1Q9ULH1 1129 aa18.75■□□□□ 0.59
SCAF4-206ENST00000485790 MYOM1P52179 1685 aa18.74■□□□□ 0.59
SCAF4-206ENST00000485790 PLEKHG2Q9H7P9 1386 aa18.74■□□□□ 0.59
SCAF4-206ENST00000485790 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.74■□□□□ 0.59
SCAF4-206ENST00000485790 SSFA2P28290 1259 aa18.74■□□□□ 0.59
SCAF4-206ENST00000485790 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
SCAF4-206ENST00000485790 IGSF1Q8N6C5 1336 aa18.74■□□□□ 0.59
SCAF4-206ENST00000485790 PHF14O94880 888 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 MTHFSP49914 203 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 CABP4P57796 275 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 C1orf141Q5JVX7 400 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 NLGN2Q8NFZ4 835 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 ATG3Q9NT62 314 aa18.73■□□□□ 0.59
SCAF4-206ENST00000485790 ZNF530Q6P9A1 599 aaPredicted RBP18.72■□□□□ 0.59
SCAF4-206ENST00000485790 TRAPPC3LQ5T215 181 aa18.71■□□□□ 0.59
SCAF4-206ENST00000485790 RBM42Q9BTD8 480 aaKnown RBP18.71■□□□□ 0.59
SCAF4-206ENST00000485790 RGPD2P0DJD1 1756 aa18.7■□□□□ 0.58
SCAF4-206ENST00000485790 KIF20BQ96Q89 1820 aa18.7■□□□□ 0.58
SCAF4-206ENST00000485790 GNPATO15228 680 aa18.7■□□□□ 0.58
SCAF4-206ENST00000485790 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
SCAF4-206ENST00000485790 LINC00116Q8NCU8 138 aa18.7■□□□□ 0.58
SCAF4-206ENST00000485790 DOT1LQ8TEK3 1739 aa18.69■□□□□ 0.58
SCAF4-206ENST00000485790 RTCBQ9Y3I0 505 aaKnown RBP18.69■□□□□ 0.58
SCAF4-206ENST00000485790 ITPK1Q13572 414 aa18.68■□□□□ 0.58
SCAF4-206ENST00000485790 RC3H1Q5TC82 1133 aaKnown RBP18.67■□□□□ 0.58
SCAF4-206ENST00000485790 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
SCAF4-206ENST00000485790 IL13P35225 146 aa18.66■□□□□ 0.58
SCAF4-206ENST00000485790 LY75O60449 1722 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms