RNA–Protein interactions for RNA: ENST00000485781.5

MDH1-213, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-213ENST00000485781 SLC12A5Q9H2X9 1139 aa16.35■□□□□ 0.21
MDH1-213ENST00000485781 ANKRD36BQ8N2N9 1353 aa16.35■□□□□ 0.21
MDH1-213ENST00000485781 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.21
MDH1-213ENST00000485781 YBX3P16989 372 aaKnown RBP eCLIP16.33■□□□□ 0.21e-13■■□□□ 12.6
MDH1-213ENST00000485781 ZCRB1Q8TBF4 217 aaKnown RBP16.33■□□□□ 0.2
MDH1-213ENST00000485781 CD163L1Q9NR16 1453 aa16.33■□□□□ 0.2
MDH1-213ENST00000485781 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.2
MDH1-213ENST00000485781 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.2
MDH1-213ENST00000485781 AMPHP49418 695 aa16.32■□□□□ 0.2
MDH1-213ENST00000485781 MSL1Q68DK7 614 aa16.32■□□□□ 0.2
MDH1-213ENST00000485781 USP47Q96K76 1375 aa16.32■□□□□ 0.2
MDH1-213ENST00000485781 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
MDH1-213ENST00000485781 FAM208AQ9UK61 1670 aaKnown RBP16.32■□□□□ 0.2
MDH1-213ENST00000485781 DOT1LQ8TEK3 1739 aa16.31■□□□□ 0.2
MDH1-213ENST00000485781 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
MDH1-213ENST00000485781 GPBP1L1Q9HC44 474 aaPredicted RBP16.31■□□□□ 0.2
MDH1-213ENST00000485781 ATP10DQ9P241 1426 aa16.3■□□□□ 0.2
MDH1-213ENST00000485781 COG3Q96JB2 828 aa16.3■□□□□ 0.2
MDH1-213ENST00000485781 A0A1W2PP64 1363 aa16.29■□□□□ 0.2
MDH1-213ENST00000485781 LY75O60449 1722 aa16.29■□□□□ 0.2
MDH1-213ENST00000485781 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
MDH1-213ENST00000485781 NSD2O96028 1365 aa16.28■□□□□ 0.2
MDH1-213ENST00000485781 HOXC9P31274 260 aa16.28■□□□□ 0.2
MDH1-213ENST00000485781 MAP3K19Q56UN5 1328 aa16.27■□□□□ 0.2
MDH1-213ENST00000485781 FLAD1Q8NFF5 587 aa16.27■□□□□ 0.2
MDH1-213ENST00000485781 ZNF526Q8TF50 670 aaPredicted RBP16.27■□□□□ 0.2
MDH1-213ENST00000485781 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.2
MDH1-213ENST00000485781 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.19
MDH1-213ENST00000485781 RAPGEF4Q8WZA2 1011 aa16.26■□□□□ 0.19
MDH1-213ENST00000485781 CEP350Q5VT06 3117 aa16.25■□□□□ 0.19
MDH1-213ENST00000485781 MEGF6O75095 1541 aa16.25■□□□□ 0.19
MDH1-213ENST00000485781 HSPA6P17066 643 aa16.24■□□□□ 0.19
MDH1-213ENST00000485781 PUS7Q96PZ0 661 aaKnown RBP16.24■□□□□ 0.19
MDH1-213ENST00000485781 CGNL1Q0VF96 1302 aa16.23■□□□□ 0.19
MDH1-213ENST00000485781 SMG6Q86US8 1419 aaKnown RBP16.23■□□□□ 0.19
MDH1-213ENST00000485781 TATP17735 454 aaPredicted RBP16.23■□□□□ 0.19
MDH1-213ENST00000485781 FBLN1P23142 703 aa16.23■□□□□ 0.19
MDH1-213ENST00000485781 USHBP1Q8N6Y0 703 aa16.23■□□□□ 0.19
MDH1-213ENST00000485781 NBPF6Q5VWK0 638 aa16.22■□□□□ 0.19
MDH1-213ENST00000485781 AK7Q96M32 723 aa16.22■□□□□ 0.19
MDH1-213ENST00000485781 NBPF4Q96M43 638 aa16.22■□□□□ 0.19
MDH1-213ENST00000485781 RGPD2P0DJD1 1756 aa16.22■□□□□ 0.19
MDH1-213ENST00000485781 MPRIPQ6WCQ1 1025 aa16.21■□□□□ 0.19
MDH1-213ENST00000485781 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.19
MDH1-213ENST00000485781 RTL1A6NKG5 1358 aa16.21■□□□□ 0.19
MDH1-213ENST00000485781 PALLDQ8WX93 1383 aa16.21■□□□□ 0.19
MDH1-213ENST00000485781 C5P01031 1676 aa16.21■□□□□ 0.18
MDH1-213ENST00000485781 PCDH11XQ9BZA7 1347 aa16.2■□□□□ 0.18
MDH1-213ENST00000485781 PCDH11YQ9BZA8 1340 aa16.2■□□□□ 0.18
MDH1-213ENST00000485781 RRS1Q15050 365 aaKnown RBP16.2■□□□□ 0.18
MDH1-213ENST00000485781 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
MDH1-213ENST00000485781 PHF14O94880 888 aa16.19■□□□□ 0.18
MDH1-213ENST00000485781 SMARCC1Q92922 1105 aaPredicted RBP16.19■□□□□ 0.18
MDH1-213ENST00000485781 ADCY9O60503 1353 aa16.18■□□□□ 0.18
MDH1-213ENST00000485781 NSD3Q9BZ95 1437 aa16.17■□□□□ 0.18
MDH1-213ENST00000485781 SLC24A1O60721 1099 aa16.16■□□□□ 0.18
MDH1-213ENST00000485781 GGNBP2Q9H3C7 697 aa16.16■□□□□ 0.18
MDH1-213ENST00000485781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.15■□□□□ 0.18
MDH1-213ENST00000485781 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
MDH1-213ENST00000485781 TONSLQ96HA7 1378 aa16.14■□□□□ 0.17
MDH1-213ENST00000485781 C4BP0C0L5 1744 aa16.14■□□□□ 0.17
MDH1-213ENST00000485781 ST20-MTHFSA0A0A6YYL1 179 aa16.13■□□□□ 0.17
MDH1-213ENST00000485781 SSFA2P28290 1259 aa16.13■□□□□ 0.17
MDH1-213ENST00000485781 FYB1O15117 783 aa16.12■□□□□ 0.17
MDH1-213ENST00000485781 CYP27B1O15528 508 aa16.12■□□□□ 0.17
MDH1-213ENST00000485781 HSP90AB2PQ58FF8 381 aa16.12■□□□□ 0.17
MDH1-213ENST00000485781 SMIM5Q71RC9 77 aa16.12■□□□□ 0.17
MDH1-213ENST00000485781 INSRP06213 1382 aa16.12■□□□□ 0.17
MDH1-213ENST00000485781 KIF3CO14782 793 aa16.11■□□□□ 0.17
MDH1-213ENST00000485781 APLP1P51693 650 aa16.11■□□□□ 0.17
MDH1-213ENST00000485781 AMIGO3Q86WK7 504 aa16.11■□□□□ 0.17
MDH1-213ENST00000485781 TESK2Q96S53 571 aa16.11■□□□□ 0.17
MDH1-213ENST00000485781 FLT4P35916 1363 aa16.11■□□□□ 0.17
MDH1-213ENST00000485781 LOC102724428A0A0B4J2F2 783 aa16.1■□□□□ 0.17
MDH1-213ENST00000485781 SIK1P57059 783 aa16.1■□□□□ 0.17
MDH1-213ENST00000485781 PIGBQ92521 554 aa16.1■□□□□ 0.17
MDH1-213ENST00000485781 UBR3Q6ZT12 1888 aa16.1■□□□□ 0.17
MDH1-213ENST00000485781 GNPATO15228 680 aa16.09■□□□□ 0.17
MDH1-213ENST00000485781 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
MDH1-213ENST00000485781 SPG7Q9UQ90 795 aa16.09■□□□□ 0.17
MDH1-213ENST00000485781 ITGB4P16144 1822 aa16.09■□□□□ 0.17
MDH1-213ENST00000485781 LINC00116Q8NCU8 138 aa16.08■□□□□ 0.16
MDH1-213ENST00000485781 KIF24Q5T7B8 1368 aa16.08■□□□□ 0.16
MDH1-213ENST00000485781 MMP10P09238 476 aa16.07■□□□□ 0.16
MDH1-213ENST00000485781 ATP6V1AP38606 617 aa16.07■□□□□ 0.16
MDH1-213ENST00000485781 TMF1P82094 1093 aa16.07■□□□□ 0.16
MDH1-213ENST00000485781 BCS1LQ9Y276 419 aa16.07■□□□□ 0.16
MDH1-213ENST00000485781 TOGARAM1Q9Y4F4 1720 aa16.07■□□□□ 0.16
MDH1-213ENST00000485781 PPM1GO15355 546 aaPredicted RBP16.06■□□□□ 0.16
MDH1-213ENST00000485781 TOMM70O94826 608 aa16.06■□□□□ 0.16
MDH1-213ENST00000485781 NKX1-1Q15270 411 aaPredicted RBP16.05■□□□□ 0.16
MDH1-213ENST00000485781 ARHGAP27Q6ZUM4 889 aa16.05■□□□□ 0.16
MDH1-213ENST00000485781 TGFB2P61812 414 aa16.04■□□□□ 0.16
MDH1-213ENST00000485781 ASAP1Q9ULH1 1129 aa16.04■□□□□ 0.16
MDH1-213ENST00000485781 EMILIN1Q9Y6C2 1016 aa16.04■□□□□ 0.16
MDH1-213ENST00000485781 PKD1L3Q7Z443 1732 aa16.03■□□□□ 0.16
MDH1-213ENST00000485781 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
MDH1-213ENST00000485781 ITPK1Q13572 414 aa16.03■□□□□ 0.16
MDH1-213ENST00000485781 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
MDH1-213ENST00000485781 RTCBQ9Y3I0 505 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms