RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 ADRA2BP18089 450 aa12.57□□□□□ -0.4
SHROOM3-207ENST00000485780 IL13P35225 146 aa12.57□□□□□ -0.4
SHROOM3-207ENST00000485780 EZH2Q15910 746 aaKnown RBP12.57□□□□□ -0.4
SHROOM3-207ENST00000485780 EXOC5O00471 708 aa12.56□□□□□ -0.4
SHROOM3-207ENST00000485780 CNGB1Q14028 1251 aaPredicted RBP12.56□□□□□ -0.4
SHROOM3-207ENST00000485780 NBPF6Q5VWK0 638 aa12.56□□□□□ -0.4
SHROOM3-207ENST00000485780 NBPF4Q96M43 638 aa12.56□□□□□ -0.4
SHROOM3-207ENST00000485780 MEGF6O75095 1541 aa12.56□□□□□ -0.4
SHROOM3-207ENST00000485780 LTV1Q96GA3 475 aaPredicted RBP12.55□□□□□ -0.4
SHROOM3-207ENST00000485780 EYA1Q99502 592 aa12.55□□□□□ -0.4
SHROOM3-207ENST00000485780 TNS2Q63HR2 1409 aa12.54□□□□□ -0.4
SHROOM3-207ENST00000485780 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
SHROOM3-207ENST00000485780 DIAPH1O60610 1272 aaKnown RBP12.54□□□□□ -0.4
SHROOM3-207ENST00000485780 CFAP53Q96M91 514 aa12.54□□□□□ -0.4
SHROOM3-207ENST00000485780 ANP32CO43423 234 aa12.53□□□□□ -0.4
SHROOM3-207ENST00000485780 IL2RBP14784 551 aa12.53□□□□□ -0.4
SHROOM3-207ENST00000485780 MARCH10Q8NA82 808 aaPredicted RBP12.53□□□□□ -0.4
SHROOM3-207ENST00000485780 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
SHROOM3-207ENST00000485780 R3HDM1Q15032 1099 aaKnown RBP12.52□□□□□ -0.41
SHROOM3-207ENST00000485780 NBPF14Q5TI25 921 aa12.51□□□□□ -0.41
SHROOM3-207ENST00000485780 BCL11BQ9C0K0 894 aaPredicted RBP12.51□□□□□ -0.41
SHROOM3-207ENST00000485780 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
SHROOM3-207ENST00000485780 USHBP1Q8N6Y0 703 aa12.5□□□□□ -0.41
SHROOM3-207ENST00000485780 BCL9O00512 1426 aa12.5□□□□□ -0.41
SHROOM3-207ENST00000485780 VIRMAQ69YN4 1812 aaKnown RBP12.49□□□□□ -0.41
SHROOM3-207ENST00000485780 ADAMTS7Q9UKP4 1686 aa12.49□□□□□ -0.41
SHROOM3-207ENST00000485780 DIEXFQ68CQ4 756 aaKnown RBP12.49□□□□□ -0.41
SHROOM3-207ENST00000485780 AEBP1Q8IUX7 1158 aa12.48□□□□□ -0.41
SHROOM3-207ENST00000485780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHROOM3-207ENST00000485780 NUDCQ9Y266 331 aa12.48□□□□□ -0.41
SHROOM3-207ENST00000485780 RREB1Q92766 1687 aa12.48□□□□□ -0.41
SHROOM3-207ENST00000485780 PLSCR1O15162 318 aa12.47□□□□□ -0.41
SHROOM3-207ENST00000485780 SULT6B1Q6IMI4 303 aa12.47□□□□□ -0.41
SHROOM3-207ENST00000485780 RAPGEF4Q8WZA2 1011 aa12.47□□□□□ -0.41
SHROOM3-207ENST00000485780 ACSBG1Q96GR2 724 aa12.47□□□□□ -0.41
SHROOM3-207ENST00000485780 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
SHROOM3-207ENST00000485780 TOGARAM1Q9Y4F4 1720 aa12.47□□□□□ -0.41
SHROOM3-207ENST00000485780 DOT1LQ8TEK3 1739 aa12.46□□□□□ -0.41
SHROOM3-207ENST00000485780 NHSQ6T4R5 1651 aa12.46□□□□□ -0.41
SHROOM3-207ENST00000485780 TATP17735 454 aaPredicted RBP12.46□□□□□ -0.41
SHROOM3-207ENST00000485780 CCDC184Q52MB2 194 aa12.46□□□□□ -0.41
SHROOM3-207ENST00000485780 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.41
SHROOM3-207ENST00000485780 DLG5Q8TDM6 1919 aa12.46□□□□□ -0.42
SHROOM3-207ENST00000485780 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.42
SHROOM3-207ENST00000485780 NUP188Q5SRE5 1749 aa12.45□□□□□ -0.42
SHROOM3-207ENST00000485780 FCHSD2O94868 740 aa12.45□□□□□ -0.42
SHROOM3-207ENST00000485780 PTF1AQ7RTS3 328 aa12.45□□□□□ -0.42
SHROOM3-207ENST00000485780 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 RGPD3A6NKT7 1758 aaPredicted RBP12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 RGPD4Q7Z3J3 1758 aa12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 U2SURPO15042 1029 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 KCNQ2O43526 872 aa12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 HMOX1P09601 288 aa12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 U2AF1L5P0DN76 240 aaPredicted RBP12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 U2AF1Q01081 240 aaKnown RBP eCLIP12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 ZCRB1Q8TBF4 217 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 LRP5O75197 1615 aa12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 ITGB4P16144 1822 aa12.44□□□□□ -0.42
SHROOM3-207ENST00000485780 CCER2I3L3R5 266 aa12.43□□□□□ -0.42
SHROOM3-207ENST00000485780 AMOTQ4VCS5 1084 aa12.43□□□□□ -0.42
SHROOM3-207ENST00000485780 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
SHROOM3-207ENST00000485780 CYP27B1O15528 508 aa12.42□□□□□ -0.42
SHROOM3-207ENST00000485780 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
SHROOM3-207ENST00000485780 TXNRD1Q16881 649 aa12.42□□□□□ -0.42
SHROOM3-207ENST00000485780 PNISRQ8TF01 805 aaKnown RBP12.42□□□□□ -0.42
SHROOM3-207ENST00000485780 MRS2Q9HD23 443 aa12.42□□□□□ -0.42
SHROOM3-207ENST00000485780 SPG7Q9UQ90 795 aa12.42□□□□□ -0.42
SHROOM3-207ENST00000485780 MRC1P22897 1456 aa12.41□□□□□ -0.42
SHROOM3-207ENST00000485780 SIPA1L3O60292 1781 aaPredicted RBP12.41□□□□□ -0.42
SHROOM3-207ENST00000485780 NKX1-1Q15270 411 aaPredicted RBP12.41□□□□□ -0.42
SHROOM3-207ENST00000485780 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
SHROOM3-207ENST00000485780 KDM6AO15550 1401 aaPredicted RBP12.4□□□□□ -0.42
SHROOM3-207ENST00000485780 BTAF1O14981 1849 aa12.4□□□□□ -0.42
SHROOM3-207ENST00000485780 PHKG2P15735 406 aa12.4□□□□□ -0.42
SHROOM3-207ENST00000485780 WDR43Q15061 677 aaKnown RBP eCLIP12.4□□□□□ -0.42
SHROOM3-207ENST00000485780 PLEKHO1Q53GL0 409 aaPredicted RBP12.4□□□□□ -0.42
SHROOM3-207ENST00000485780 STK32BQ9NY57 414 aa12.4□□□□□ -0.42
SHROOM3-207ENST00000485780 PROM2Q8N271 834 aa12.39□□□□□ -0.43
SHROOM3-207ENST00000485780 PHACTR3Q96KR7 559 aa12.39□□□□□ -0.43
SHROOM3-207ENST00000485780 PNNQ9H307 717 aaKnown RBP12.39□□□□□ -0.43
SHROOM3-207ENST00000485780 ANO8Q9HCE9 1232 aaPredicted RBP12.39□□□□□ -0.43
SHROOM3-207ENST00000485780 ADAMTS8Q9UP79 889 aa12.39□□□□□ -0.43
SHROOM3-207ENST00000485780 PAPPAQ13219 1627 aa12.38□□□□□ -0.43
SHROOM3-207ENST00000485780 MTHFSDQ2M296 383 aaKnown RBP12.38□□□□□ -0.43
SHROOM3-207ENST00000485780 ZNF530Q6P9A1 599 aaPredicted RBP12.38□□□□□ -0.43
SHROOM3-207ENST00000485780 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
SHROOM3-207ENST00000485780 MIER1Q8N108 512 aa12.38□□□□□ -0.43
SHROOM3-207ENST00000485780 GAS2L2Q8NHY3 880 aa12.38□□□□□ -0.43
SHROOM3-207ENST00000485780 PPP1R1BQ9UD71 204 aaPredicted RBP12.38□□□□□ -0.43
SHROOM3-207ENST00000485780 PRIM1P49642 420 aaKnown RBP12.37□□□□□ -0.43
SHROOM3-207ENST00000485780 AKAP4Q5JQC9 854 aa12.37□□□□□ -0.43
SHROOM3-207ENST00000485780 SPON1Q9HCB6 807 aa12.37□□□□□ -0.43
SHROOM3-207ENST00000485780 MAP3K5Q99683 1374 aa12.37□□□□□ -0.43
SHROOM3-207ENST00000485780 LY75O60449 1722 aa12.37□□□□□ -0.43
SHROOM3-207ENST00000485780 KAT6BQ8WYB5 2073 aa12.36□□□□□ -0.43
SHROOM3-207ENST00000485780 CEMIPQ8WUJ3 1361 aa12.36□□□□□ -0.43
SHROOM3-207ENST00000485780 HSP90AB1P08238 724 aaKnown RBP12.36□□□□□ -0.43
SHROOM3-207ENST00000485780 SLC15A2Q16348 729 aa12.36□□□□□ -0.43
SHROOM3-207ENST00000485780 RUNDC1Q96C34 613 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms