RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 HMOX1P09601 288 aa26.63■■□□□ 1.85
COL6A2-208ENST00000485591 EXOC5O00471 708 aa26.62■■□□□ 1.85
COL6A2-208ENST00000485591 KRT27Q7Z3Y8 459 aa26.62■■□□□ 1.85
COL6A2-208ENST00000485591 U2AF1L5P0DN76 240 aaPredicted RBP26.61■■□□□ 1.85
COL6A2-208ENST00000485591 U2AF1Q01081 240 aaKnown RBP eCLIP26.61■■□□□ 1.85
COL6A2-208ENST00000485591 ILDR2Q71H61 639 aa26.61■■□□□ 1.85
COL6A2-208ENST00000485591 PDE3BQ13370 1112 aa26.6■■□□□ 1.85
COL6A2-208ENST00000485591 CCDC184Q52MB2 194 aa26.59■■□□□ 1.85
COL6A2-208ENST00000485591 ZCRB1Q8TBF4 217 aaKnown RBP26.59■■□□□ 1.85
COL6A2-208ENST00000485591 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.59■■□□□ 1.85
COL6A2-208ENST00000485591 RSPH6AQ9H0K4 717 aa26.58■■□□□ 1.85
COL6A2-208ENST00000485591 FCHSD2O94868 740 aa26.56■■□□□ 1.84
COL6A2-208ENST00000485591 MRS2Q9HD23 443 aa26.56■■□□□ 1.84
COL6A2-208ENST00000485591 SPG7Q9UQ90 795 aa26.56■■□□□ 1.84
COL6A2-208ENST00000485591 PCDH11XQ9BZA7 1347 aa26.56■■□□□ 1.84
COL6A2-208ENST00000485591 PCDH11YQ9BZA8 1340 aa26.56■■□□□ 1.84
COL6A2-208ENST00000485591 SBF2Q86WG5 1849 aa26.55■■□□□ 1.84
COL6A2-208ENST00000485591 PRKAR2BP31323 418 aa26.54■■□□□ 1.84
COL6A2-208ENST00000485591 WDR43Q15061 677 aaKnown RBP eCLIP26.54■■□□□ 1.84
COL6A2-208ENST00000485591 AMOTQ4VCS5 1084 aa26.54■■□□□ 1.84
COL6A2-208ENST00000485591 MARCH10Q8NA82 808 aaPredicted RBP26.54■■□□□ 1.84
COL6A2-208ENST00000485591 PLEKHO1Q53GL0 409 aaPredicted RBP26.53■■□□□ 1.84
COL6A2-208ENST00000485591 BCL9O00512 1426 aa26.53■■□□□ 1.84
COL6A2-208ENST00000485591 DOT1LQ8TEK3 1739 aa26.51■■□□□ 1.83
COL6A2-208ENST00000485591 DDX54Q8TDD1 881 aaKnown RBP26.51■■□□□ 1.83
COL6A2-208ENST00000485591 VIRMAQ69YN4 1812 aaKnown RBP26.51■■□□□ 1.83
COL6A2-208ENST00000485591 CCER2I3L3R5 266 aa26.5■■□□□ 1.83
COL6A2-208ENST00000485591 FAM182BQ5T319 152 aa26.5■■□□□ 1.83
COL6A2-208ENST00000485591 CYP27B1O15528 508 aa26.49■■□□□ 1.83
COL6A2-208ENST00000485591 PNNQ9H307 717 aaKnown RBP26.49■■□□□ 1.83
COL6A2-208ENST00000485591 TOGARAM1Q9Y4F4 1720 aa26.48■■□□□ 1.83
COL6A2-208ENST00000485591 NHSQ6T4R5 1651 aa26.48■■□□□ 1.83
COL6A2-208ENST00000485591 FAM196AQ6ZSG2 479 aa26.48■■□□□ 1.83
COL6A2-208ENST00000485591 PNISRQ8TF01 805 aaKnown RBP26.48■■□□□ 1.83
COL6A2-208ENST00000485591 ZNF530Q6P9A1 599 aaPredicted RBP26.47■■□□□ 1.83
COL6A2-208ENST00000485591 MIER1Q8N108 512 aa26.47■■□□□ 1.83
COL6A2-208ENST00000485591 PLEKHF1Q96S99 279 aa26.47■■□□□ 1.83
COL6A2-208ENST00000485591 ADAMTS8Q9UP79 889 aa26.47■■□□□ 1.83
COL6A2-208ENST00000485591 DLG5Q8TDM6 1919 aa26.46■■□□□ 1.83
COL6A2-208ENST00000485591 PHKG2P15735 406 aa26.46■■□□□ 1.83
COL6A2-208ENST00000485591 IFNL2Q8IZJ0 200 aa26.46■■□□□ 1.83
COL6A2-208ENST00000485591 PHACTR3Q96KR7 559 aa26.46■■□□□ 1.83
COL6A2-208ENST00000485591 SCN11AQ9UI33 1791 aa26.46■■□□□ 1.83
COL6A2-208ENST00000485591 ADAMTS7Q9UKP4 1686 aa26.45■■□□□ 1.82
COL6A2-208ENST00000485591 MTHFSDQ2M296 383 aaKnown RBP26.45■■□□□ 1.82
COL6A2-208ENST00000485591 TNS1Q9HBL0 1735 aaKnown RBP26.45■■□□□ 1.82
COL6A2-208ENST00000485591 NEFMP07197 916 aa26.44■■□□□ 1.82
COL6A2-208ENST00000485591 GAS2L2Q8NHY3 880 aa26.44■■□□□ 1.82
COL6A2-208ENST00000485591 ITGB4P16144 1822 aa26.44■■□□□ 1.82
COL6A2-208ENST00000485591 NKX1-1Q15270 411 aaPredicted RBP26.43■■□□□ 1.82
COL6A2-208ENST00000485591 MAPK8IP3Q9UPT6 1336 aa26.42■■□□□ 1.82
COL6A2-208ENST00000485591 C1orf141Q5JVX7 400 aa26.42■■□□□ 1.82
COL6A2-208ENST00000485591 AKAP4Q5JQC9 854 aa26.41■■□□□ 1.82
COL6A2-208ENST00000485591 HSP90AB1P08238 724 aaKnown RBP26.4■■□□□ 1.82
COL6A2-208ENST00000485591 KDM6AO15550 1401 aaPredicted RBP26.39■■□□□ 1.82
COL6A2-208ENST00000485591 KAT6BQ8WYB5 2073 aa26.39■■□□□ 1.82
COL6A2-208ENST00000485591 MAP3K5Q99683 1374 aa26.39■■□□□ 1.82
COL6A2-208ENST00000485591 RUNDC1Q96C34 613 aa26.39■■□□□ 1.82
COL6A2-208ENST00000485591 BTAF1O14981 1849 aa26.38■■□□□ 1.81
COL6A2-208ENST00000485591 CCDC146Q8IYE0 955 aa26.38■■□□□ 1.81
COL6A2-208ENST00000485591 EP400Q96L91 3159 aa26.38■■□□□ 1.81
COL6A2-208ENST00000485591 DCAF5Q96JK2 942 aa26.37■■□□□ 1.81
COL6A2-208ENST00000485591 NFE2L2Q16236 605 aa26.35■■□□□ 1.81
COL6A2-208ENST00000485591 MRC1P22897 1456 aa26.35■■□□□ 1.81
COL6A2-208ENST00000485591 GNAT3A8MTJ3 354 aa26.34■■□□□ 1.81
COL6A2-208ENST00000485591 ACSBG1Q96GR2 724 aa26.34■■□□□ 1.81
COL6A2-208ENST00000485591 SIPA1L3O60292 1781 aaPredicted RBP26.33■■□□□ 1.81
COL6A2-208ENST00000485591 TRIM37O94972 964 aa26.33■■□□□ 1.81
COL6A2-208ENST00000485591 MPRIPQ6WCQ1 1025 aa26.33■■□□□ 1.81
COL6A2-208ENST00000485591 FAM9BQ8IZU0 186 aa26.33■■□□□ 1.81
COL6A2-208ENST00000485591 BCL11BQ9C0K0 894 aaPredicted RBP26.33■■□□□ 1.81
COL6A2-208ENST00000485591 RGPD3A6NKT7 1758 aaPredicted RBP26.33■■□□□ 1.8
COL6A2-208ENST00000485591 RGPD4Q7Z3J3 1758 aa26.33■■□□□ 1.8
COL6A2-208ENST00000485591 KCNQ2O43526 872 aa26.31■■□□□ 1.8
COL6A2-208ENST00000485591 CCDC125Q86Z20 511 aa26.31■■□□□ 1.8
COL6A2-208ENST00000485591 UPF1Q92900 1129 aaKnown RBP eCLIP26.31■■□□□ 1.8
COL6A2-208ENST00000485591 ERVV-2B6SEH9 535 aa26.3■■□□□ 1.8
COL6A2-208ENST00000485591 HTATSF1O43719 755 aaKnown RBP26.3■■□□□ 1.8
COL6A2-208ENST00000485591 TMPOP42166 694 aaKnown RBP26.3■■□□□ 1.8
COL6A2-208ENST00000485591 PRIM1P49642 420 aaKnown RBP26.3■■□□□ 1.8
COL6A2-208ENST00000485591 RNMTO43148 476 aaKnown RBP26.29■■□□□ 1.8
COL6A2-208ENST00000485591 SYTL4Q96C24 671 aaPredicted RBP26.29■■□□□ 1.8
COL6A2-208ENST00000485591 CEMIPQ8WUJ3 1361 aa26.29■■□□□ 1.8
COL6A2-208ENST00000485591 PTF1AQ7RTS3 328 aa26.28■■□□□ 1.8
COL6A2-208ENST00000485591 RTF1Q92541 710 aaKnown RBP26.27■■□□□ 1.8
COL6A2-208ENST00000485591 LGR6Q9HBX8 967 aa26.27■■□□□ 1.8
COL6A2-208ENST00000485591 PAPPAQ13219 1627 aa26.27■■□□□ 1.8
COL6A2-208ENST00000485591 APAF1O14727 1248 aa26.26■■□□□ 1.79
COL6A2-208ENST00000485591 IL17REQ8NFR9 667 aa26.26■■□□□ 1.79
COL6A2-208ENST00000485591 LY75O60449 1722 aa26.25■■□□□ 1.79
COL6A2-208ENST00000485591 RIPK4P57078 832 aa26.25■■□□□ 1.79
COL6A2-208ENST00000485591 SF3B2Q13435 895 aaKnown RBP26.25■■□□□ 1.79
COL6A2-208ENST00000485591 TMOD3Q9NYL9 352 aa26.25■■□□□ 1.79
COL6A2-208ENST00000485591 RRP7AQ9Y3A4 280 aaKnown RBP26.25■■□□□ 1.79
COL6A2-208ENST00000485591 CABP4P57796 275 aa26.24■■□□□ 1.79
COL6A2-208ENST00000485591 LMOD3Q0VAK6 560 aa26.24■■□□□ 1.79
COL6A2-208ENST00000485591 PIGBQ92521 554 aa26.23■■□□□ 1.79
COL6A2-208ENST00000485591 SLC52A2Q9HAB3 445 aa26.23■■□□□ 1.79
COL6A2-208ENST00000485591 SOCS7O14512 581 aa26.22■■□□□ 1.79
COL6A2-208ENST00000485591 MCM10Q7L590 875 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms