RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
LDLRAP1-206ENST00000485476 QSER1Q2KHR3 1735 aa16.75■□□□□ 0.27
LDLRAP1-206ENST00000485476 KIF24Q5T7B8 1368 aa16.75■□□□□ 0.27
LDLRAP1-206ENST00000485476 GRIN3BO60391 1043 aa16.74■□□□□ 0.27
LDLRAP1-206ENST00000485476 FLAD1Q8NFF5 587 aa16.74■□□□□ 0.27
LDLRAP1-206ENST00000485476 SYTL4Q96C24 671 aaPredicted RBP16.74■□□□□ 0.27
LDLRAP1-206ENST00000485476 NSD2O96028 1365 aa16.74■□□□□ 0.27
LDLRAP1-206ENST00000485476 CHD4Q14839 1912 aa16.73■□□□□ 0.27
LDLRAP1-206ENST00000485476 C1QTNF8P60827 252 aa16.73■□□□□ 0.27
LDLRAP1-206ENST00000485476 CDCA8Q53HL2 280 aa16.73■□□□□ 0.27
LDLRAP1-206ENST00000485476 RAPGEF4Q8WZA2 1011 aa16.73■□□□□ 0.27
LDLRAP1-206ENST00000485476 CCNL1Q9UK58 526 aaPredicted RBP16.73■□□□□ 0.27
LDLRAP1-206ENST00000485476 COL24A1Q17RW2 1714 aa16.73■□□□□ 0.27
LDLRAP1-206ENST00000485476 KAT6BQ8WYB5 2073 aa16.73■□□□□ 0.27
LDLRAP1-206ENST00000485476 SMG6Q86US8 1419 aaKnown RBP16.72■□□□□ 0.27
LDLRAP1-206ENST00000485476 FYB1O15117 783 aa16.72■□□□□ 0.27
LDLRAP1-206ENST00000485476 TMF1P82094 1093 aa16.72■□□□□ 0.27
LDLRAP1-206ENST00000485476 USP47Q96K76 1375 aa16.72■□□□□ 0.27
LDLRAP1-206ENST00000485476 TATP17735 454 aaPredicted RBP16.71■□□□□ 0.27
LDLRAP1-206ENST00000485476 NBPF6Q5VWK0 638 aa16.71■□□□□ 0.27
LDLRAP1-206ENST00000485476 NBPF4Q96M43 638 aa16.71■□□□□ 0.27
LDLRAP1-206ENST00000485476 INSRP06213 1382 aa16.7■□□□□ 0.26
LDLRAP1-206ENST00000485476 MEGF6O75095 1541 aa16.7■□□□□ 0.26
LDLRAP1-206ENST00000485476 PCDH11XQ9BZA7 1347 aa16.69■□□□□ 0.26
LDLRAP1-206ENST00000485476 PCDH11YQ9BZA8 1340 aa16.69■□□□□ 0.26
LDLRAP1-206ENST00000485476 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
LDLRAP1-206ENST00000485476 CD2APQ9Y5K6 639 aa16.68■□□□□ 0.26
LDLRAP1-206ENST00000485476 COL23A1Q86Y22 540 aaPredicted RBP16.67■□□□□ 0.26
LDLRAP1-206ENST00000485476 LY75O60449 1722 aa16.67■□□□□ 0.26
LDLRAP1-206ENST00000485476 FLT4P35916 1363 aa16.66■□□□□ 0.26
LDLRAP1-206ENST00000485476 GIGYF1O75420 1035 aaPredicted RBP16.66■□□□□ 0.26
LDLRAP1-206ENST00000485476 FBLN1P23142 703 aa16.66■□□□□ 0.26
LDLRAP1-206ENST00000485476 RRS1Q15050 365 aaKnown RBP16.66■□□□□ 0.26
LDLRAP1-206ENST00000485476 KCNQ4P56696 695 aa16.65■□□□□ 0.26
LDLRAP1-206ENST00000485476 KLHL34Q8N239 644 aa16.65■□□□□ 0.26
LDLRAP1-206ENST00000485476 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
LDLRAP1-206ENST00000485476 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
LDLRAP1-206ENST00000485476 NKX1-1Q15270 411 aaPredicted RBP16.64■□□□□ 0.25
LDLRAP1-206ENST00000485476 NLGN2Q8NFZ4 835 aa16.64■□□□□ 0.25
LDLRAP1-206ENST00000485476 NSD3Q9BZ95 1437 aa16.63■□□□□ 0.25
LDLRAP1-206ENST00000485476 MSH5O43196 834 aa16.63■□□□□ 0.25
LDLRAP1-206ENST00000485476 HSP90AB2PQ58FF8 381 aa16.63■□□□□ 0.25
LDLRAP1-206ENST00000485476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.63■□□□□ 0.25
LDLRAP1-206ENST00000485476 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
LDLRAP1-206ENST00000485476 PALLDQ8WX93 1383 aa16.62■□□□□ 0.25
LDLRAP1-206ENST00000485476 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
LDLRAP1-206ENST00000485476 CYP27B1O15528 508 aa16.61■□□□□ 0.25
LDLRAP1-206ENST00000485476 USHBP1Q8N6Y0 703 aa16.61■□□□□ 0.25
LDLRAP1-206ENST00000485476 SHANK3Q9BYB0 1731 aa16.61■□□□□ 0.25
LDLRAP1-206ENST00000485476 PLEKHG2Q9H7P9 1386 aa16.61■□□□□ 0.25
LDLRAP1-206ENST00000485476 YBX3P16989 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
LDLRAP1-206ENST00000485476 TIMELESSQ9UNS1 1208 aa16.6■□□□□ 0.25
LDLRAP1-206ENST00000485476 SPG7Q9UQ90 795 aa16.6■□□□□ 0.25
LDLRAP1-206ENST00000485476 NCAPD2Q15021 1401 aa16.6■□□□□ 0.25
LDLRAP1-206ENST00000485476 MPRIPQ6WCQ1 1025 aa16.59■□□□□ 0.25
LDLRAP1-206ENST00000485476 SSFA2P28290 1259 aa16.58■□□□□ 0.24
LDLRAP1-206ENST00000485476 AK7Q96M32 723 aa16.58■□□□□ 0.24
LDLRAP1-206ENST00000485476 WASHC2AQ641Q2 1341 aa16.58■□□□□ 0.24
LDLRAP1-206ENST00000485476 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.24
LDLRAP1-206ENST00000485476 TUBGCP6Q96RT7 1819 aa16.57■□□□□ 0.24
LDLRAP1-206ENST00000485476 PIGBQ92521 554 aa16.57■□□□□ 0.24
LDLRAP1-206ENST00000485476 CARD14Q9BXL6 1004 aa16.56■□□□□ 0.24
LDLRAP1-206ENST00000485476 MSL1Q68DK7 614 aa16.55■□□□□ 0.24
LDLRAP1-206ENST00000485476 RGPD2P0DJD1 1756 aa16.55■□□□□ 0.24
LDLRAP1-206ENST00000485476 LOC102724428A0A0B4J2F2 783 aa16.54■□□□□ 0.24
LDLRAP1-206ENST00000485476 SIK1P57059 783 aa16.54■□□□□ 0.24
LDLRAP1-206ENST00000485476 EMILIN1Q9Y6C2 1016 aa16.54■□□□□ 0.24
LDLRAP1-206ENST00000485476 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.53■□□□□ 0.24
LDLRAP1-206ENST00000485476 IFNL2Q8IZJ0 200 aa16.53■□□□□ 0.24
LDLRAP1-206ENST00000485476 TMOD3Q9NYL9 352 aa16.53■□□□□ 0.24
LDLRAP1-206ENST00000485476 C5P01031 1676 aa16.53■□□□□ 0.24
LDLRAP1-206ENST00000485476 EYA1Q99502 592 aa16.51■□□□□ 0.23
LDLRAP1-206ENST00000485476 GPBP1L1Q9HC44 474 aaPredicted RBP16.51■□□□□ 0.23
LDLRAP1-206ENST00000485476 ATP10DQ9P241 1426 aa16.51■□□□□ 0.23
LDLRAP1-206ENST00000485476 ADCY9O60503 1353 aa16.51■□□□□ 0.23
LDLRAP1-206ENST00000485476 PHKG2P15735 406 aa16.5■□□□□ 0.23
LDLRAP1-206ENST00000485476 C4BP0C0L5 1744 aa16.5■□□□□ 0.23
LDLRAP1-206ENST00000485476 PKD1L3Q7Z443 1732 aa16.5■□□□□ 0.23
LDLRAP1-206ENST00000485476 ERVV-2B6SEH9 535 aa16.49■□□□□ 0.23
LDLRAP1-206ENST00000485476 HSP90AB1P08238 724 aaKnown RBP16.49■□□□□ 0.23
LDLRAP1-206ENST00000485476 POLKQ9UBT6 870 aa16.49■□□□□ 0.23
LDLRAP1-206ENST00000485476 TAF1LQ8IZX4 1826 aa16.49■□□□□ 0.23
LDLRAP1-206ENST00000485476 KIF20BQ96Q89 1820 aa16.49■□□□□ 0.23
LDLRAP1-206ENST00000485476 IGSF1Q8N6C5 1336 aa16.48■□□□□ 0.23
LDLRAP1-206ENST00000485476 PPM1GO15355 546 aaPredicted RBP16.48■□□□□ 0.23
LDLRAP1-206ENST00000485476 ADRA2BP18089 450 aa16.48■□□□□ 0.23
LDLRAP1-206ENST00000485476 RC3H1Q5TC82 1133 aaKnown RBP16.48■□□□□ 0.23
LDLRAP1-206ENST00000485476 LINC00116Q8NCU8 138 aa16.48■□□□□ 0.23
LDLRAP1-206ENST00000485476 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
LDLRAP1-206ENST00000485476 ATP6V1AP38606 617 aa16.47■□□□□ 0.23
LDLRAP1-206ENST00000485476 TGFB2P61812 414 aa16.47■□□□□ 0.23
LDLRAP1-206ENST00000485476 TRIM26Q12899 539 aaPredicted RBP16.47■□□□□ 0.23
LDLRAP1-206ENST00000485476 AMIGO3Q86WK7 504 aa16.47■□□□□ 0.23
LDLRAP1-206ENST00000485476 NLGN1Q8N2Q7 840 aa16.47■□□□□ 0.23
LDLRAP1-206ENST00000485476 ATG3Q9NT62 314 aa16.47■□□□□ 0.23
LDLRAP1-206ENST00000485476 ASAP1Q9ULH1 1129 aa16.47■□□□□ 0.23
LDLRAP1-206ENST00000485476 PHF14O94880 888 aa16.46■□□□□ 0.23
LDLRAP1-206ENST00000485476 CEP350Q5VT06 3117 aa16.45■□□□□ 0.22
LDLRAP1-206ENST00000485476 GNPATO15228 680 aa16.45■□□□□ 0.22
LDLRAP1-206ENST00000485476 HSPA6P17066 643 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms