RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 FBLN1P23142 703 aa10.67□□□□□ -0.7
MACF1-220ENST00000485063 MORC1Q86VD1 984 aa10.67□□□□□ -0.7
MACF1-220ENST00000485063 UPF1Q92900 1129 aaKnown RBP eCLIP10.67□□□□□ -0.7
MACF1-220ENST00000485063 LTV1Q96GA3 475 aaPredicted RBP10.67□□□□□ -0.7
MACF1-220ENST00000485063 FLT4P35916 1363 aa10.66□□□□□ -0.7
MACF1-220ENST00000485063 PPM1GO15355 546 aaPredicted RBP10.66□□□□□ -0.7
MACF1-220ENST00000485063 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
MACF1-220ENST00000485063 SF3B2Q13435 895 aaKnown RBP10.66□□□□□ -0.7
MACF1-220ENST00000485063 CCDC125Q86Z20 511 aa10.66□□□□□ -0.7
MACF1-220ENST00000485063 GABBR2O75899 941 aa10.65□□□□□ -0.7
MACF1-220ENST00000485063 TNNT2P45379 298 aaPredicted RBP10.65□□□□□ -0.7
MACF1-220ENST00000485063 DDB1Q16531 1140 aa10.65□□□□□ -0.7
MACF1-220ENST00000485063 PLSCR2Q9NRY7 297 aa10.65□□□□□ -0.7
MACF1-220ENST00000485063 EXOC5O00471 708 aa10.64□□□□□ -0.71
MACF1-220ENST00000485063 RGPD2P0DJD1 1756 aa10.64□□□□□ -0.71
MACF1-220ENST00000485063 INSRP06213 1382 aa10.64□□□□□ -0.71
MACF1-220ENST00000485063 LRRC37A3O60309 1634 aa10.63□□□□□ -0.71
MACF1-220ENST00000485063 IL2RBP14784 551 aa10.63□□□□□ -0.71
MACF1-220ENST00000485063 FAM196AQ6ZSG2 479 aa10.63□□□□□ -0.71
MACF1-220ENST00000485063 EMILIN1Q9Y6C2 1016 aa10.63□□□□□ -0.71
MACF1-220ENST00000485063 PEAK1Q9H792 1746 aa10.63□□□□□ -0.71
MACF1-220ENST00000485063 RGPD1P0DJD0 1748 aa10.62□□□□□ -0.71
MACF1-220ENST00000485063 PER1O15534 1290 aaPredicted RBP10.62□□□□□ -0.71
MACF1-220ENST00000485063 HSP90AB2PQ58FF8 381 aa10.62□□□□□ -0.71
MACF1-220ENST00000485063 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
MACF1-220ENST00000485063 CC2D1BQ5T0F9 858 aaKnown RBP10.62□□□□□ -0.71
MACF1-220ENST00000485063 POLKQ9UBT6 870 aa10.62□□□□□ -0.71
MACF1-220ENST00000485063 CNGB1Q14028 1251 aaPredicted RBP10.61□□□□□ -0.71
MACF1-220ENST00000485063 FAM182BQ5T319 152 aa10.61□□□□□ -0.71
MACF1-220ENST00000485063 OVOS2A0A0G2JMS6 1433 aa10.6□□□□□ -0.71
MACF1-220ENST00000485063 RAPGEF4Q8WZA2 1011 aa10.6□□□□□ -0.71
MACF1-220ENST00000485063 NPC1L1Q9UHC9 1359 aa10.6□□□□□ -0.71
MACF1-220ENST00000485063 DISP2A7MBM2 1401 aa10.59□□□□□ -0.71
MACF1-220ENST00000485063 TNS2Q63HR2 1409 aa10.59□□□□□ -0.71
MACF1-220ENST00000485063 BAG6P46379 1132 aa10.59□□□□□ -0.71
MACF1-220ENST00000485063 NBPF6Q5VWK0 638 aa10.59□□□□□ -0.71
MACF1-220ENST00000485063 NBPF4Q96M43 638 aa10.59□□□□□ -0.71
MACF1-220ENST00000485063 TATP17735 454 aaPredicted RBP10.58□□□□□ -0.72
MACF1-220ENST00000485063 CHADLQ6NUI6 762 aa10.58□□□□□ -0.72
MACF1-220ENST00000485063 SBF2Q86WG5 1849 aa10.57□□□□□ -0.72
MACF1-220ENST00000485063 TRIM37O94972 964 aa10.57□□□□□ -0.72
MACF1-220ENST00000485063 USHBP1Q8N6Y0 703 aa10.57□□□□□ -0.72
MACF1-220ENST00000485063 MTHFSP49914 203 aa10.56□□□□□ -0.72
MACF1-220ENST00000485063 EIF4A2Q14240 407 aaKnown RBP10.56□□□□□ -0.72
MACF1-220ENST00000485063 MARCH10Q8NA82 808 aaPredicted RBP10.56□□□□□ -0.72
MACF1-220ENST00000485063 ZCRB1Q8TBF4 217 aaKnown RBP10.56□□□□□ -0.72
MACF1-220ENST00000485063 DDX54Q8TDD1 881 aaKnown RBP10.56□□□□□ -0.72
MACF1-220ENST00000485063 KAT6BQ8WYB5 2073 aa10.56□□□□□ -0.72
MACF1-220ENST00000485063 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
MACF1-220ENST00000485063 APBA3O96018 575 aa10.55□□□□□ -0.72
MACF1-220ENST00000485063 EYA1Q99502 592 aa10.55□□□□□ -0.72
MACF1-220ENST00000485063 BCL9O00512 1426 aa10.54□□□□□ -0.72
MACF1-220ENST00000485063 DDX10Q13206 875 aaKnown RBP10.54□□□□□ -0.72
MACF1-220ENST00000485063 CFAP53Q96M91 514 aa10.54□□□□□ -0.72
MACF1-220ENST00000485063 SPG7Q9UQ90 795 aa10.54□□□□□ -0.72
MACF1-220ENST00000485063 MEGF6O75095 1541 aa10.53□□□□□ -0.72
MACF1-220ENST00000485063 DIAPH1O60610 1272 aaKnown RBP10.53□□□□□ -0.72
MACF1-220ENST00000485063 DEFB132Q7Z7B7 95 aa10.53□□□□□ -0.72
MACF1-220ENST00000485063 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
MACF1-220ENST00000485063 IGSF1Q8N6C5 1336 aa10.53□□□□□ -0.72
MACF1-220ENST00000485063 PCDH11XQ9BZA7 1347 aa10.53□□□□□ -0.72
MACF1-220ENST00000485063 PCDH11YQ9BZA8 1340 aa10.53□□□□□ -0.72
MACF1-220ENST00000485063 SHANK3Q9BYB0 1731 aa10.53□□□□□ -0.72
MACF1-220ENST00000485063 NCAPD2Q15021 1401 aa10.52□□□□□ -0.73
MACF1-220ENST00000485063 EN1Q05925 392 aaPredicted RBP10.52□□□□□ -0.73
MACF1-220ENST00000485063 NHSQ6T4R5 1651 aa10.52□□□□□ -0.73
MACF1-220ENST00000485063 PKD1L3Q7Z443 1732 aa10.52□□□□□ -0.73
MACF1-220ENST00000485063 PARD3Q8TEW0 1356 aa10.52□□□□□ -0.73
MACF1-220ENST00000485063 PLEKHG2Q9H7P9 1386 aa10.52□□□□□ -0.73
MACF1-220ENST00000485063 IL13P35225 146 aa10.51□□□□□ -0.73
MACF1-220ENST00000485063 CLCN6P51797 869 aa10.51□□□□□ -0.73
MACF1-220ENST00000485063 ACSBG1Q96GR2 724 aa10.51□□□□□ -0.73
MACF1-220ENST00000485063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.51□□□□□ -0.731e-6■■□□□ 13.6
MACF1-220ENST00000485063 DOT1LQ8TEK3 1739 aa10.5□□□□□ -0.73
MACF1-220ENST00000485063 RGPD3A6NKT7 1758 aaPredicted RBP10.5□□□□□ -0.73
MACF1-220ENST00000485063 RGPD4Q7Z3J3 1758 aa10.5□□□□□ -0.73
MACF1-220ENST00000485063 PPP2R1AP30153 589 aa10.5□□□□□ -0.73
MACF1-220ENST00000485063 PLEKHO1Q53GL0 409 aaPredicted RBP10.5□□□□□ -0.73
MACF1-220ENST00000485063 SULT6B1Q6IMI4 303 aa10.5□□□□□ -0.73
MACF1-220ENST00000485063 SYTL4Q96C24 671 aaPredicted RBP10.5□□□□□ -0.73
MACF1-220ENST00000485063 NUDCQ9Y266 331 aa10.5□□□□□ -0.73
MACF1-220ENST00000485063 ZNF316A6NFI3 1004 aaPredicted RBP10.49□□□□□ -0.73
MACF1-220ENST00000485063 U2SURPO15042 1029 aaKnown RBP10.49□□□□□ -0.73
MACF1-220ENST00000485063 PLSCR1O15162 318 aa10.49□□□□□ -0.73
MACF1-220ENST00000485063 RALBP1Q15311 655 aa10.49□□□□□ -0.73
MACF1-220ENST00000485063 EZH2Q15910 746 aaKnown RBP10.49□□□□□ -0.73
MACF1-220ENST00000485063 AMOTQ4VCS5 1084 aa10.49□□□□□ -0.73
MACF1-220ENST00000485063 IFNL2Q8IZJ0 200 aa10.49□□□□□ -0.73
MACF1-220ENST00000485063 FARP1Q9Y4F1 1045 aaPredicted RBP10.49□□□□□ -0.73
MACF1-220ENST00000485063 BTAF1O14981 1849 aa10.49□□□□□ -0.73
MACF1-220ENST00000485063 EP400Q96L91 3159 aa10.48□□□□□ -0.73
MACF1-220ENST00000485063 CAMKK2Q96RR4 588 aa10.48□□□□□ -0.73
MACF1-220ENST00000485063 RREB1Q92766 1687 aa10.47□□□□□ -0.73
MACF1-220ENST00000485063 KCNQ2O43526 872 aa10.47□□□□□ -0.73
MACF1-220ENST00000485063 HSP90AB1P08238 724 aaKnown RBP10.47□□□□□ -0.73
MACF1-220ENST00000485063 HMOX1P09601 288 aa10.47□□□□□ -0.73
MACF1-220ENST00000485063 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
MACF1-220ENST00000485063 C1orf141Q5JVX7 400 aa10.47□□□□□ -0.73
MACF1-220ENST00000485063 NBPF14Q5TI25 921 aa10.47□□□□□ -0.73
MACF1-220ENST00000485063 CYP27B1O15528 508 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms