RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 SUV39H2Q9H5I1 410 aa9.71□□□□□ -0.86
VPS8-223ENST00000485024 GRIN2CQ14957 1233 aa9.7□□□□□ -0.86
VPS8-223ENST00000485024 AMHR2Q16671 573 aa9.7□□□□□ -0.86
VPS8-223ENST00000485024 OXCT2Q9BYC2 517 aaPredicted RBP9.7□□□□□ -0.86
VPS8-223ENST00000485024 CD163Q86VB7 1156 aa9.69□□□□□ -0.86
VPS8-223ENST00000485024 SEMA6BQ9H3T3 888 aa9.69□□□□□ -0.86
VPS8-223ENST00000485024 HOXB4P17483 251 aaPredicted RBP9.68□□□□□ -0.86
VPS8-223ENST00000485024 RNF144AP50876 292 aaPredicted RBP9.68□□□□□ -0.86
VPS8-223ENST00000485024 KRTAP19-1Q8IUB9 90 aa9.68□□□□□ -0.86
VPS8-223ENST00000485024 TRERF1Q96PN7 1200 aa9.68□□□□□ -0.86
VPS8-223ENST00000485024 BTBD11A6QL63 1104 aa9.67□□□□□ -0.86
VPS8-223ENST00000485024 PDXDC2PQ6P474 469 aa9.67□□□□□ -0.86
VPS8-223ENST00000485024 OCSTAMPQ9BR26 566 aa9.67□□□□□ -0.86
VPS8-223ENST00000485024 LIMD1Q9UGP4 676 aa9.67□□□□□ -0.86
VPS8-223ENST00000485024 CHRNA4P43681 627 aa9.66□□□□□ -0.86
VPS8-223ENST00000485024 FOXD4L6Q3SYB3 417 aaPredicted RBP9.66□□□□□ -0.86
VPS8-223ENST00000485024 FOXD4L3Q6VB84 417 aaPredicted RBP9.66□□□□□ -0.86
VPS8-223ENST00000485024 RRAGCQ9HB90 399 aa9.66□□□□□ -0.86
VPS8-223ENST00000485024 NSFL1CQ9UNZ2 370 aaKnown RBP9.66□□□□□ -0.86
VPS8-223ENST00000485024 NUTM2BA6NNL0 878 aaPredicted RBP9.65□□□□□ -0.86
VPS8-223ENST00000485024 NUTM2EB1AL46 878 aaPredicted RBP9.65□□□□□ -0.86
VPS8-223ENST00000485024 NUTM2DQ5VT03 806 aaPredicted RBP9.65□□□□□ -0.86
VPS8-223ENST00000485024 LINC00114Q6XXX2 140 aa9.65□□□□□ -0.86
VPS8-223ENST00000485024 NUTM2AQ8IVF1 878 aaPredicted RBP9.65□□□□□ -0.86
VPS8-223ENST00000485024 DYRK1BQ9Y463 629 aa9.65□□□□□ -0.86
VPS8-223ENST00000485024 H7C1W4 665 aa9.64□□□□□ -0.87
VPS8-223ENST00000485024 LILRB3O75022 631 aa9.64□□□□□ -0.87
VPS8-223ENST00000485024 GAS2L1Q99501 681 aaPredicted RBP9.64□□□□□ -0.87
VPS8-223ENST00000485024 MAP2K3P46734 347 aa9.63□□□□□ -0.87
VPS8-223ENST00000485024 RAB15P59190 212 aa9.63□□□□□ -0.87
VPS8-223ENST00000485024 DOC2BQ14184 412 aa9.63□□□□□ -0.87
VPS8-223ENST00000485024 RTL5Q5HYW3 569 aaPredicted RBP9.63□□□□□ -0.87
VPS8-223ENST00000485024 ZBTB33Q86T24 672 aa9.63□□□□□ -0.87
VPS8-223ENST00000485024 HELBQ8NG08 1087 aaPredicted RBP9.63□□□□□ -0.87
VPS8-223ENST00000485024 ERVH48-1M5A8F1 160 aa9.62□□□□□ -0.87
VPS8-223ENST00000485024 TULP1O00294 542 aaPredicted RBP9.61□□□□□ -0.87
VPS8-223ENST00000485024 KLRG1Q96E93 195 aa9.61□□□□□ -0.87
VPS8-223ENST00000485024 THBS1P07996 1170 aa9.6□□□□□ -0.87
VPS8-223ENST00000485024 EDARADDQ8WWZ3 215 aa9.6□□□□□ -0.87
VPS8-223ENST00000485024 FKBPLQ9UIM3 349 aa9.6□□□□□ -0.87
VPS8-223ENST00000485024 POU4F2Q12837 409 aa9.59□□□□□ -0.87
VPS8-223ENST00000485024 PARP9Q8IXQ6 854 aa9.59□□□□□ -0.87
VPS8-223ENST00000485024 SCO2A0A1W2PP80 73 aa9.58□□□□□ -0.88
VPS8-223ENST00000485024 TUSC1Q2TAM9 212 aa9.58□□□□□ -0.88
VPS8-223ENST00000485024 ADAM32Q8TC27 787 aa9.58□□□□□ -0.88
VPS8-223ENST00000485024 NUCKS1Q9H1E3 243 aaKnown RBP9.58□□□□□ -0.88
VPS8-223ENST00000485024 NBPF20Q3BBV1 942 aa9.57□□□□□ -0.88
VPS8-223ENST00000485024 MYSM1Q5VVJ2 828 aa9.57□□□□□ -0.88
VPS8-223ENST00000485024 GPC1P35052 558 aa9.56□□□□□ -0.88
VPS8-223ENST00000485024 CYLDQ9NQC7 956 aa9.56□□□□□ -0.88
VPS8-223ENST00000485024 GNB5O14775 395 aa9.55□□□□□ -0.88
VPS8-223ENST00000485024 GDF2Q9UK05 429 aaPredicted RBP9.55□□□□□ -0.88
VPS8-223ENST00000485024 MEN1O00255 615 aa9.54□□□□□ -0.88
VPS8-223ENST00000485024 CTDSPL2Q05D32 466 aa9.54□□□□□ -0.88
VPS8-223ENST00000485024 CFHR5Q9BXR6 569 aa9.54□□□□□ -0.88
VPS8-223ENST00000485024 NBPF10Q6P3W6 841 aaKnown RBP9.53□□□□□ -0.88
VPS8-223ENST00000485024 NBPF15Q8N660 670 aa9.53□□□□□ -0.88
VPS8-223ENST00000485024 ESPNB1AK53 854 aa9.52□□□□□ -0.89
VPS8-223ENST00000485024 AMPD1P23109 780 aa9.52□□□□□ -0.89
VPS8-223ENST00000485024 GOLGA6L1Q8N7Z2 621 aa9.52□□□□□ -0.89
VPS8-223ENST00000485024 LRRN4Q8WUT4 740 aa9.52□□□□□ -0.89
VPS8-223ENST00000485024 ZC3H4Q9UPT8 1303 aaKnown RBP9.52□□□□□ -0.89
VPS8-223ENST00000485024 ATP5J2-PTCD1G3V325 749 aa9.51□□□□□ -0.89
VPS8-223ENST00000485024 PTK2Q05397 1052 aa9.51□□□□□ -0.89
VPS8-223ENST00000485024 RSPO4Q2I0M5 234 aaPredicted RBP9.51□□□□□ -0.89
VPS8-223ENST00000485024 ARTNQ5T4W7 220 aa9.51□□□□□ -0.89
VPS8-223ENST00000485024 BARGINQ6ZT62 677 aa9.51□□□□□ -0.89
VPS8-223ENST00000485024 A0A1W2PRU2 124 aa9.5□□□□□ -0.89
VPS8-223ENST00000485024 F11P03951 625 aa9.5□□□□□ -0.89
VPS8-223ENST00000485024 DGKGP49619 791 aa9.5□□□□□ -0.89
VPS8-223ENST00000485024 ZFP64Q9NPA5 681 aa9.5□□□□□ -0.89
VPS8-223ENST00000485024 C2CD2LO14523 706 aa9.49□□□□□ -0.89
VPS8-223ENST00000485024 NR6A1Q15406 480 aa9.49□□□□□ -0.89
VPS8-223ENST00000485024 SLCO4C1Q6ZQN7 724 aa9.49□□□□□ -0.89
VPS8-223ENST00000485024 GRIP2Q9C0E4 1043 aa9.49□□□□□ -0.89
VPS8-223ENST00000485024 SPATA31C2B4DYI2 1134 aa9.48□□□□□ -0.89
VPS8-223ENST00000485024 UBAP2LQ14157 1087 aaKnown RBP9.48□□□□□ -0.89
VPS8-223ENST00000485024 SLC27A3Q5K4L6 730 aa9.48□□□□□ -0.89
VPS8-223ENST00000485024 GOLGA2P5Q9HBQ8 144 aa9.48□□□□□ -0.89
VPS8-223ENST00000485024 TIMMDC1Q9NPL8 285 aa9.48□□□□□ -0.89
VPS8-223ENST00000485024 GPSM3Q9Y4H4 160 aa9.48□□□□□ -0.89
VPS8-223ENST00000485024 PIK3R2O00459 728 aa9.47□□□□□ -0.89
VPS8-223ENST00000485024 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
VPS8-223ENST00000485024 NKAPLQ5M9Q1 402 aa9.47□□□□□ -0.89
VPS8-223ENST00000485024 BTBD6Q96KE9 485 aa9.47□□□□□ -0.89
VPS8-223ENST00000485024 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
VPS8-223ENST00000485024 GGA1Q9UJY5 639 aa9.47□□□□□ -0.89
VPS8-223ENST00000485024 GATA4P43694 442 aa9.46□□□□□ -0.9
VPS8-223ENST00000485024 KDM2AQ9Y2K7 1162 aa9.46□□□□□ -0.9
VPS8-223ENST00000485024 ZMYND10O75800 440 aa9.45□□□□□ -0.9
VPS8-223ENST00000485024 WDR44Q5JSH3 913 aa9.45□□□□□ -0.9
VPS8-223ENST00000485024 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
VPS8-223ENST00000485024 GPAMQ9HCL2 828 aa9.45□□□□□ -0.9
VPS8-223ENST00000485024 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
VPS8-223ENST00000485024 EPXP11678 715 aa9.44□□□□□ -0.9
VPS8-223ENST00000485024 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.44□□□□□ -0.9
VPS8-223ENST00000485024 PHF24Q9UPV7 400 aa9.44□□□□□ -0.9
VPS8-223ENST00000485024 PPP2R2DQ66LE6 453 aa9.43□□□□□ -0.9
VPS8-223ENST00000485024 TAS1R3Q7RTX0 852 aa9.43□□□□□ -0.9
VPS8-223ENST00000485024 BMP4P12644 408 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms