RNA–Protein interactions for RNA: ENST00000484453.1

RTKN-209, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-209ENST00000484453 APBA3O96018 575 aa30.15■■■□□ 2.42
RTKN-209ENST00000484453 NCAPD2Q15021 1401 aa30.14■■■□□ 2.42
RTKN-209ENST00000484453 CAMKK2Q96RR4 588 aa30.14■■■□□ 2.42
RTKN-209ENST00000484453 BTAF1O14981 1849 aa30.13■■■□□ 2.41
RTKN-209ENST00000484453 TATP17735 454 aaPredicted RBP30.13■■■□□ 2.41
RTKN-209ENST00000484453 EYA1Q99502 592 aa30.13■■■□□ 2.41
RTKN-209ENST00000484453 RGPD3A6NKT7 1758 aaPredicted RBP30.13■■■□□ 2.41
RTKN-209ENST00000484453 RGPD4Q7Z3J3 1758 aa30.13■■■□□ 2.41
RTKN-209ENST00000484453 RREB1Q92766 1687 aa30.12■■■□□ 2.41
RTKN-209ENST00000484453 BCL9O00512 1426 aa30.12■■■□□ 2.41
RTKN-209ENST00000484453 MTHFSP49914 203 aa30.11■■■□□ 2.41
RTKN-209ENST00000484453 DDX54Q8TDD1 881 aaKnown RBP30.11■■■□□ 2.41
RTKN-209ENST00000484453 ZCRB1Q8TBF4 217 aaKnown RBP30.1■■■□□ 2.41
RTKN-209ENST00000484453 PTF1AQ7RTS3 328 aa30.09■■■□□ 2.41
RTKN-209ENST00000484453 NUP188Q5SRE5 1749 aa30.08■■■□□ 2.41
RTKN-209ENST00000484453 ITGB4P16144 1822 aa30.07■■■□□ 2.4
RTKN-209ENST00000484453 IGSF1Q8N6C5 1336 aa30.06■■■□□ 2.4
RTKN-209ENST00000484453 R3HDM1Q15032 1099 aaKnown RBP30.06■■■□□ 2.4
RTKN-209ENST00000484453 VIRMAQ69YN4 1812 aaKnown RBP30.05■■■□□ 2.4
RTKN-209ENST00000484453 DDX10Q13206 875 aaKnown RBP30.04■■■□□ 2.4
RTKN-209ENST00000484453 ACSBG1Q96GR2 724 aa30.04■■■□□ 2.4
RTKN-209ENST00000484453 TOGARAM1Q9Y4F4 1720 aa30.02■■■□□ 2.4
RTKN-209ENST00000484453 BCL11BQ9C0K0 894 aaPredicted RBP30.02■■■□□ 2.4
RTKN-209ENST00000484453 PCDH11XQ9BZA7 1347 aa30.01■■■□□ 2.4
RTKN-209ENST00000484453 PCDH11YQ9BZA8 1340 aa30.01■■■□□ 2.4
RTKN-209ENST00000484453 COL3A1P02461 1466 aaPredicted RBP30■■■□□ 2.39
RTKN-209ENST00000484453 IL13P35225 146 aa30■■■□□ 2.39
RTKN-209ENST00000484453 KCNQ2O43526 872 aa29.98■■■□□ 2.39
RTKN-209ENST00000484453 DIAPH1O60610 1272 aaKnown RBP29.97■■■□□ 2.39
RTKN-209ENST00000484453 SPG7Q9UQ90 795 aa29.97■■■□□ 2.39
RTKN-209ENST00000484453 PARD3Q8TEW0 1356 aa29.97■■■□□ 2.39
RTKN-209ENST00000484453 AEBP1Q8IUX7 1158 aa29.96■■■□□ 2.39
RTKN-209ENST00000484453 PPP2R1AP30153 589 aa29.95■■■□□ 2.39
RTKN-209ENST00000484453 SULT6B1Q6IMI4 303 aa29.95■■■□□ 2.39
RTKN-209ENST00000484453 SYTL4Q96C24 671 aaPredicted RBP29.93■■■□□ 2.38
RTKN-209ENST00000484453 CYP27B1O15528 508 aa29.92■■■□□ 2.38
RTKN-209ENST00000484453 LY75O60449 1722 aa29.92■■■□□ 2.38
RTKN-209ENST00000484453 CFAP53Q96M91 514 aa29.92■■■□□ 2.38
RTKN-209ENST00000484453 KDRP35968 1356 aa29.91■■■□□ 2.38
RTKN-209ENST00000484453 PLEKHG2Q9H7P9 1386 aa29.91■■■□□ 2.38
RTKN-209ENST00000484453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.91■■■□□ 2.38
RTKN-209ENST00000484453 PLSCR1O15162 318 aa29.9■■■□□ 2.38
RTKN-209ENST00000484453 HMOX1P09601 288 aa29.89■■■□□ 2.38
RTKN-209ENST00000484453 SCN11AQ9UI33 1791 aa29.88■■■□□ 2.37
RTKN-209ENST00000484453 PRIM1P49642 420 aaKnown RBP29.88■■■□□ 2.37
RTKN-209ENST00000484453 U2SURPO15042 1029 aaKnown RBP29.87■■■□□ 2.37
RTKN-209ENST00000484453 PLEKHO1Q53GL0 409 aaPredicted RBP29.87■■■□□ 2.37
RTKN-209ENST00000484453 PROM2Q8N271 834 aa29.87■■■□□ 2.37
RTKN-209ENST00000484453 LRP5O75197 1615 aa29.86■■■□□ 2.37
RTKN-209ENST00000484453 IFNL2Q8IZJ0 200 aa29.86■■■□□ 2.37
RTKN-209ENST00000484453 PHKG2P15735 406 aa29.84■■■□□ 2.37
RTKN-209ENST00000484453 ZNF316A6NFI3 1004 aaPredicted RBP29.83■■■□□ 2.37
RTKN-209ENST00000484453 AMOTQ4VCS5 1084 aa29.83■■■□□ 2.37
RTKN-209ENST00000484453 NBPF14Q5TI25 921 aa29.83■■■□□ 2.37
RTKN-209ENST00000484453 ZNF530Q6P9A1 599 aaPredicted RBP29.83■■■□□ 2.37
RTKN-209ENST00000484453 ANO8Q9HCE9 1232 aaPredicted RBP29.82■■■□□ 2.36
RTKN-209ENST00000484453 NKX1-1Q15270 411 aaPredicted RBP29.81■■■□□ 2.36
RTKN-209ENST00000484453 RALBP1Q15311 655 aa29.8■■■□□ 2.36
RTKN-209ENST00000484453 TXNRD1Q16881 649 aa29.8■■■□□ 2.36
RTKN-209ENST00000484453 TAF1LQ8IZX4 1826 aa29.8■■■□□ 2.36
RTKN-209ENST00000484453 NUDCQ9Y266 331 aa29.79■■■□□ 2.36
RTKN-209ENST00000484453 C1orf141Q5JVX7 400 aa29.78■■■□□ 2.36
RTKN-209ENST00000484453 MPRIPQ6WCQ1 1025 aa29.78■■■□□ 2.36
RTKN-209ENST00000484453 PAPPAQ13219 1627 aa29.77■■■□□ 2.36
RTKN-209ENST00000484453 C5P01031 1676 aa29.76■■■□□ 2.35
RTKN-209ENST00000484453 HSP90AB1P08238 724 aaKnown RBP29.75■■■□□ 2.35
RTKN-209ENST00000484453 TUBGCP6Q96RT7 1819 aa29.75■■■□□ 2.35
RTKN-209ENST00000484453 KDM6AO15550 1401 aaPredicted RBP29.74■■■□□ 2.35
RTKN-209ENST00000484453 PDGFDQ9GZP0 370 aaPredicted RBP29.74■■■□□ 2.35
RTKN-209ENST00000484453 DLG5Q8TDM6 1919 aa29.74■■■□□ 2.35
RTKN-209ENST00000484453 U2AF1L5P0DN76 240 aaPredicted RBP29.72■■■□□ 2.35
RTKN-209ENST00000484453 U2AF1Q01081 240 aaKnown RBP eCLIP29.72■■■□□ 2.35
RTKN-209ENST00000484453 TMOD3Q9NYL9 352 aa29.72■■■□□ 2.35
RTKN-209ENST00000484453 MYBBP1AQ9BQG0 1328 aaKnown RBP29.71■■■□□ 2.35
RTKN-209ENST00000484453 DCAF5Q96JK2 942 aa29.71■■■□□ 2.35
RTKN-209ENST00000484453 ADAMTS7Q9UKP4 1686 aa29.7■■■□□ 2.35
RTKN-209ENST00000484453 QSER1Q2KHR3 1735 aa29.7■■■□□ 2.34
RTKN-209ENST00000484453 MTHFSDQ2M296 383 aaKnown RBP29.69■■■□□ 2.34
RTKN-209ENST00000484453 PIGBQ92521 554 aa29.69■■■□□ 2.34
RTKN-209ENST00000484453 PRKAR2BP31323 418 aa29.68■■■□□ 2.34
RTKN-209ENST00000484453 AKAP4Q5JQC9 854 aa29.68■■■□□ 2.34
RTKN-209ENST00000484453 RSPH6AQ9H0K4 717 aa29.68■■■□□ 2.34
RTKN-209ENST00000484453 CASZ1Q86V15 1759 aa29.67■■■□□ 2.34
RTKN-209ENST00000484453 PALLDQ8WX93 1383 aa29.67■■■□□ 2.34
RTKN-209ENST00000484453 SLC27A3Q5K4L6 730 aa29.66■■■□□ 2.34
RTKN-209ENST00000484453 LRRC4BQ9NT99 713 aa29.66■■■□□ 2.34
RTKN-209ENST00000484453 ERVV-2B6SEH9 535 aa29.65■■■□□ 2.34
RTKN-209ENST00000484453 KCNQ4P56696 695 aa29.65■■■□□ 2.34
RTKN-209ENST00000484453 PRKRIP1Q9H875 184 aaPredicted RBP29.65■■■□□ 2.34
RTKN-209ENST00000484453 STK32BQ9NY57 414 aa29.65■■■□□ 2.34
RTKN-209ENST00000484453 SIPA1L3O60292 1781 aaPredicted RBP29.64■■■□□ 2.34
RTKN-209ENST00000484453 CCNL1Q9UK58 526 aaPredicted RBP29.64■■■□□ 2.34
RTKN-209ENST00000484453 CABP4P57796 275 aa29.63■■■□□ 2.33
RTKN-209ENST00000484453 SMARCC1Q92922 1105 aaPredicted RBP29.63■■■□□ 2.33
RTKN-209ENST00000484453 GAS2L2Q8NHY3 880 aa29.62■■■□□ 2.33
RTKN-209ENST00000484453 FCHSD2O94868 740 aa29.61■■■□□ 2.33
RTKN-209ENST00000484453 SLC15A2Q16348 729 aa29.61■■■□□ 2.33
RTKN-209ENST00000484453 C4BP0C0L5 1744 aa29.6■■■□□ 2.33
RTKN-209ENST00000484453 PHACTR3Q96KR7 559 aa29.6■■■□□ 2.33
RTKN-209ENST00000484453 SPON1Q9HCB6 807 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms