RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 TTLL8A6PVC2 850 aa10.57□□□□□ -0.72
CCDC66-219ENST00000484441 PIK3CDO00329 1044 aa10.57□□□□□ -0.72
CCDC66-219ENST00000484441 PLPP7Q8NBV4 271 aa10.57□□□□□ -0.72
CCDC66-219ENST00000484441 CTSOP43234 321 aaPredicted RBP10.56□□□□□ -0.72
CCDC66-219ENST00000484441 INSM2Q96T92 566 aaPredicted RBP10.56□□□□□ -0.72
CCDC66-219ENST00000484441 SOBPA7XYQ1 873 aa10.55□□□□□ -0.72
CCDC66-219ENST00000484441 FOXD4L5Q5VV16 416 aaPredicted RBP10.55□□□□□ -0.72
CCDC66-219ENST00000484441 UCN2Q96RP3 112 aa10.55□□□□□ -0.72
CCDC66-219ENST00000484441 ZNF395Q9H8N7 513 aaPredicted RBP10.55□□□□□ -0.72
CCDC66-219ENST00000484441 GTF3C3Q9Y5Q9 886 aa10.55□□□□□ -0.72
CCDC66-219ENST00000484441 MAN1A2O60476 641 aa10.54□□□□□ -0.72
CCDC66-219ENST00000484441 MYCP01106 439 aaPredicted RBP10.54□□□□□ -0.72
CCDC66-219ENST00000484441 USP4Q13107 963 aa10.54□□□□□ -0.72
CCDC66-219ENST00000484441 RNF217Q8TC41 542 aa10.54□□□□□ -0.72
CCDC66-219ENST00000484441 GNRH1P01148 92 aa10.53□□□□□ -0.72
CCDC66-219ENST00000484441 LCE2AQ5TA79 106 aaPredicted RBP10.53□□□□□ -0.72
CCDC66-219ENST00000484441 HDGFL1Q5TGJ6 251 aa10.53□□□□□ -0.72
CCDC66-219ENST00000484441 NPAS3Q8IXF0 933 aa10.53□□□□□ -0.72
CCDC66-219ENST00000484441 LZTS3O60299 673 aaPredicted RBP10.52□□□□□ -0.73
CCDC66-219ENST00000484441 GPC1P35052 558 aa10.52□□□□□ -0.73
CCDC66-219ENST00000484441 RNF144AP50876 292 aaPredicted RBP10.52□□□□□ -0.73
CCDC66-219ENST00000484441 NFX1Q12986 1120 aaKnown RBP10.52□□□□□ -0.73
CCDC66-219ENST00000484441 CLN3Q13286 438 aa10.52□□□□□ -0.73
CCDC66-219ENST00000484441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.52□□□□□ -0.73
CCDC66-219ENST00000484441 GLMNQ92990 594 aa10.52□□□□□ -0.73
CCDC66-219ENST00000484441 SIRT1Q96EB6 747 aa10.52□□□□□ -0.73
CCDC66-219ENST00000484441 A0A1W2PRU2 124 aa10.51□□□□□ -0.73
CCDC66-219ENST00000484441 OXLD1Q5BKU9 147 aa10.51□□□□□ -0.73
CCDC66-219ENST00000484441 POLMQ9NP87 494 aaPredicted RBP10.51□□□□□ -0.73
CCDC66-219ENST00000484441 NXF1Q9UBU9 619 aaKnown RBP10.51□□□□□ -0.73
CCDC66-219ENST00000484441 TERTO14746 1132 aaKnown RBP10.5□□□□□ -0.73
CCDC66-219ENST00000484441 ARHGEF10LQ9HCE6 1279 aa10.5□□□□□ -0.73
CCDC66-219ENST00000484441 HRH3Q9Y5N1 445 aa10.5□□□□□ -0.73
CCDC66-219ENST00000484441 SKIP12755 728 aa10.49□□□□□ -0.73
CCDC66-219ENST00000484441 ESF1Q9H501 851 aaKnown RBP10.49□□□□□ -0.73
CCDC66-219ENST00000484441 USP17L5A8MUK1 530 aa10.48□□□□□ -0.73
CCDC66-219ENST00000484441 IL2RAP01589 272 aa10.48□□□□□ -0.73
CCDC66-219ENST00000484441 PLEKHM2Q8IWE5 1019 aa10.48□□□□□ -0.73
CCDC66-219ENST00000484441 FIGNL2A6NMB9 653 aa10.47□□□□□ -0.73
CCDC66-219ENST00000484441 ATP9BO43861 1147 aa10.47□□□□□ -0.73
CCDC66-219ENST00000484441 NCOA4Q13772 614 aa10.47□□□□□ -0.73
CCDC66-219ENST00000484441 EML3Q32P44 896 aa10.47□□□□□ -0.73
CCDC66-219ENST00000484441 TREML4Q6UXN2 200 aa10.47□□□□□ -0.73
CCDC66-219ENST00000484441 TBC1D9Q6ZT07 1266 aa10.47□□□□□ -0.73
CCDC66-219ENST00000484441 ESYT1Q9BSJ8 1104 aa10.47□□□□□ -0.73
CCDC66-219ENST00000484441 H3BM21 787 aa10.46□□□□□ -0.73
CCDC66-219ENST00000484441 MEN1O00255 615 aa10.46□□□□□ -0.73
CCDC66-219ENST00000484441 WASLO00401 505 aaPredicted RBP10.46□□□□□ -0.73
CCDC66-219ENST00000484441 LCE2CQ5TA81 110 aa10.46□□□□□ -0.73
CCDC66-219ENST00000484441 XAGE2Q96GT9 111 aa10.46□□□□□ -0.73
CCDC66-219ENST00000484441 SCNN1DP51172 638 aa10.45□□□□□ -0.74
CCDC66-219ENST00000484441 PTSQ03393 145 aa10.45□□□□□ -0.74
CCDC66-219ENST00000484441 CNKSR1Q969H4 720 aa10.45□□□□□ -0.74
CCDC66-219ENST00000484441 GRIP2Q9C0E4 1043 aa10.45□□□□□ -0.74
CCDC66-219ENST00000484441 ETNK1Q9HBU6 452 aa10.45□□□□□ -0.74
CCDC66-219ENST00000484441 RAB6BQ9NRW1 208 aa10.45□□□□□ -0.74
CCDC66-219ENST00000484441 PCDHGA11Q9Y5H2 935 aa10.45□□□□□ -0.74
CCDC66-219ENST00000484441 SENP3-EIF4A1A0A087X0R7 540 aa10.44□□□□□ -0.74
CCDC66-219ENST00000484441 SLC35F4A4IF30 521 aa10.44□□□□□ -0.74
CCDC66-219ENST00000484441 LYSMD3Q7Z3D4 306 aa10.44□□□□□ -0.74
CCDC66-219ENST00000484441 FHDC1Q9C0D6 1143 aaPredicted RBP10.44□□□□□ -0.74
CCDC66-219ENST00000484441 ZMYND15Q9H091 742 aa10.44□□□□□ -0.74
CCDC66-219ENST00000484441 USP17L3A6NCW0 530 aa10.43□□□□□ -0.74
CCDC66-219ENST00000484441 USP17L4A6NCW7 530 aa10.43□□□□□ -0.74
CCDC66-219ENST00000484441 WFS1O76024 890 aa10.43□□□□□ -0.74
CCDC66-219ENST00000484441 VSIG8P0DPA2 414 aa10.43□□□□□ -0.74
CCDC66-219ENST00000484441 ESCO1Q5FWF5 840 aa10.43□□□□□ -0.74
CCDC66-219ENST00000484441 USP17L2Q6R6M4 530 aa10.43□□□□□ -0.74
CCDC66-219ENST00000484441 USP17L1Q7RTZ2 530 aa10.43□□□□□ -0.74
CCDC66-219ENST00000484441 CALR3Q96L12 384 aaKnown RBP10.43□□□□□ -0.74
CCDC66-219ENST00000484441 NLRP3Q96P20 1036 aa10.43□□□□□ -0.74
CCDC66-219ENST00000484441 NOD1Q9Y239 953 aa10.43□□□□□ -0.74
CCDC66-219ENST00000484441 SPATA31C2B4DYI2 1134 aa10.42□□□□□ -0.74
CCDC66-219ENST00000484441 PPFIA3O75145 1194 aa10.42□□□□□ -0.74
CCDC66-219ENST00000484441 DEPDC4Q8N2C3 294 aa10.42□□□□□ -0.74
CCDC66-219ENST00000484441 STAU1O95793 577 aaKnown RBP10.41□□□□□ -0.74
CCDC66-219ENST00000484441 INHAP05111 366 aa10.41□□□□□ -0.74
CCDC66-219ENST00000484441 MAFBQ9Y5Q3 323 aaPredicted RBP10.41□□□□□ -0.74
CCDC66-219ENST00000484441 TMEM229AB2RXF0 380 aa10.4□□□□□ -0.74
CCDC66-219ENST00000484441 GDF10P55107 478 aa10.4□□□□□ -0.74
CCDC66-219ENST00000484441 GTF2IP78347 998 aa10.4□□□□□ -0.74
CCDC66-219ENST00000484441 CENPCQ03188 943 aa10.4□□□□□ -0.74
CCDC66-219ENST00000484441 WDR44Q5JSH3 913 aa10.4□□□□□ -0.74
CCDC66-219ENST00000484441 PPP1R12CQ9BZL4 782 aa10.4□□□□□ -0.74
CCDC66-219ENST00000484441 PALM3A6NDB9 673 aaPredicted RBP10.39□□□□□ -0.75
CCDC66-219ENST00000484441 VEGFBP49765 207 aa10.39□□□□□ -0.75
CCDC66-219ENST00000484441 PRICKLE2Q7Z3G6 844 aa10.39□□□□□ -0.75
CCDC66-219ENST00000484441 CCDC155Q8N6L0 562 aa10.39□□□□□ -0.75
CCDC66-219ENST00000484441 SLC16A10Q8TF71 515 aa10.39□□□□□ -0.75
CCDC66-219ENST00000484441 TFIP11Q9UBB9 837 aaKnown RBP10.39□□□□□ -0.75
CCDC66-219ENST00000484441 ZNF777Q9ULD5 760 aaPredicted RBP10.39□□□□□ -0.75
CCDC66-219ENST00000484441 SLC27A3Q5K4L6 730 aa10.38□□□□□ -0.75
CCDC66-219ENST00000484441 TRIM50Q86XT4 487 aa10.38□□□□□ -0.75
CCDC66-219ENST00000484441 SLC4A9Q96Q91 983 aa10.38□□□□□ -0.75
CCDC66-219ENST00000484441 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
CCDC66-219ENST00000484441 NBPF10Q6P3W6 841 aaKnown RBP10.37□□□□□ -0.75
CCDC66-219ENST00000484441 NBPF15Q8N660 670 aa10.37□□□□□ -0.75
CCDC66-219ENST00000484441 WIPF1O43516 503 aa10.36□□□□□ -0.75
CCDC66-219ENST00000484441 CLDN10P78369 228 aa10.36□□□□□ -0.75
CCDC66-219ENST00000484441 MTFR1Q15390 333 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms