RNA–Protein interactions for RNA: ENST00000484375.5

ARPC1B-218, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-218ENST00000484375 SULT6B1Q6IMI4 303 aa30.23■■■□□ 2.43
ARPC1B-218ENST00000484375 ZCRB1Q8TBF4 217 aaKnown RBP30.23■■■□□ 2.43
ARPC1B-218ENST00000484375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.23■■■□□ 2.43
ARPC1B-218ENST00000484375 U2SURPO15042 1029 aaKnown RBP30.22■■■□□ 2.43
ARPC1B-218ENST00000484375 FAM196AQ6ZSG2 479 aa30.21■■■□□ 2.43
ARPC1B-218ENST00000484375 SPG7Q9UQ90 795 aa30.21■■■□□ 2.43
ARPC1B-218ENST00000484375 BCL9O00512 1426 aa30.21■■■□□ 2.43
ARPC1B-218ENST00000484375 PCDH11XQ9BZA7 1347 aa30.21■■■□□ 2.43
ARPC1B-218ENST00000484375 PCDH11YQ9BZA8 1340 aa30.21■■■□□ 2.43
ARPC1B-218ENST00000484375 AMOTQ4VCS5 1084 aa30.16■■■□□ 2.42
ARPC1B-218ENST00000484375 AEBP1Q8IUX7 1158 aa30.16■■■□□ 2.42
ARPC1B-218ENST00000484375 MARCH10Q8NA82 808 aaPredicted RBP30.16■■■□□ 2.42
ARPC1B-218ENST00000484375 HMOX1P09601 288 aa30.14■■■□□ 2.42
ARPC1B-218ENST00000484375 U2AF1L5P0DN76 240 aaPredicted RBP30.14■■■□□ 2.42
ARPC1B-218ENST00000484375 U2AF1Q01081 240 aaKnown RBP eCLIP30.14■■■□□ 2.42
ARPC1B-218ENST00000484375 PLEKHO1Q53GL0 409 aaPredicted RBP30.14■■■□□ 2.42
ARPC1B-218ENST00000484375 SBF2Q86WG5 1849 aa30.14■■■□□ 2.42
ARPC1B-218ENST00000484375 SOCS7O14512 581 aa30.13■■■□□ 2.41
ARPC1B-218ENST00000484375 CCDC125Q86Z20 511 aa30.13■■■□□ 2.41
ARPC1B-218ENST00000484375 DDX54Q8TDD1 881 aaKnown RBP30.13■■■□□ 2.41
ARPC1B-218ENST00000484375 EP400Q96L91 3159 aa30.12■■■□□ 2.41
ARPC1B-218ENST00000484375 FAM182BQ5T319 152 aa30.11■■■□□ 2.41
ARPC1B-218ENST00000484375 FCHSD2O94868 740 aa30.1■■■□□ 2.41
ARPC1B-218ENST00000484375 PNNQ9H307 717 aaKnown RBP30.1■■■□□ 2.41
ARPC1B-218ENST00000484375 NHSQ6T4R5 1651 aa30.09■■■□□ 2.41
ARPC1B-218ENST00000484375 IFNL2Q8IZJ0 200 aa30.08■■■□□ 2.41
ARPC1B-218ENST00000484375 DOT1LQ8TEK3 1739 aa30.08■■■□□ 2.41
ARPC1B-218ENST00000484375 NEFMP07197 916 aa30.07■■■□□ 2.4
ARPC1B-218ENST00000484375 SF3B2Q13435 895 aaKnown RBP30.07■■■□□ 2.4
ARPC1B-218ENST00000484375 WDR43Q15061 677 aaKnown RBP eCLIP30.07■■■□□ 2.4
ARPC1B-218ENST00000484375 RSPH6AQ9H0K4 717 aa30.07■■■□□ 2.4
ARPC1B-218ENST00000484375 TNS1Q9HBL0 1735 aaKnown RBP30.07■■■□□ 2.4
ARPC1B-218ENST00000484375 UPF1Q92900 1129 aaKnown RBP eCLIP30.06■■■□□ 2.4
ARPC1B-218ENST00000484375 CYP27B1O15528 508 aa30.05■■■□□ 2.4
ARPC1B-218ENST00000484375 HSP90AB1P08238 724 aaKnown RBP30.05■■■□□ 2.4
ARPC1B-218ENST00000484375 C1orf141Q5JVX7 400 aa30.05■■■□□ 2.4
ARPC1B-218ENST00000484375 PRKAR2BP31323 418 aa30.04■■■□□ 2.4
ARPC1B-218ENST00000484375 ZNF530Q6P9A1 599 aaPredicted RBP30.04■■■□□ 2.4
ARPC1B-218ENST00000484375 PHKG2P15735 406 aa30.03■■■□□ 2.4
ARPC1B-218ENST00000484375 NKX1-1Q15270 411 aaPredicted RBP30.02■■■□□ 2.4
ARPC1B-218ENST00000484375 GAS2L2Q8NHY3 880 aa30.02■■■□□ 2.4
ARPC1B-218ENST00000484375 DIEXFQ68CQ4 756 aaKnown RBP30.01■■■□□ 2.39
ARPC1B-218ENST00000484375 KAT6BQ8WYB5 2073 aa30■■■□□ 2.39
ARPC1B-218ENST00000484375 TRIM37O94972 964 aa30■■■□□ 2.39
ARPC1B-218ENST00000484375 BCL11BQ9C0K0 894 aaPredicted RBP30■■■□□ 2.39
ARPC1B-218ENST00000484375 AKAP4Q5JQC9 854 aa29.99■■■□□ 2.39
ARPC1B-218ENST00000484375 MRS2Q9HD23 443 aa29.98■■■□□ 2.39
ARPC1B-218ENST00000484375 RGPD3A6NKT7 1758 aaPredicted RBP29.98■■■□□ 2.39
ARPC1B-218ENST00000484375 RGPD4Q7Z3J3 1758 aa29.98■■■□□ 2.39
ARPC1B-218ENST00000484375 TOGARAM1Q9Y4F4 1720 aa29.97■■■□□ 2.39
ARPC1B-218ENST00000484375 DCAF5Q96JK2 942 aa29.97■■■□□ 2.39
ARPC1B-218ENST00000484375 MAPK8IP3Q9UPT6 1336 aa29.96■■■□□ 2.39
ARPC1B-218ENST00000484375 MTHFSDQ2M296 383 aaKnown RBP29.96■■■□□ 2.39
ARPC1B-218ENST00000484375 VIRMAQ69YN4 1812 aaKnown RBP29.96■■■□□ 2.39
ARPC1B-218ENST00000484375 SCN11AQ9UI33 1791 aa29.95■■■□□ 2.39
ARPC1B-218ENST00000484375 BTAF1O14981 1849 aa29.95■■■□□ 2.39
ARPC1B-218ENST00000484375 ITGB4P16144 1822 aa29.95■■■□□ 2.39
ARPC1B-218ENST00000484375 BAG6P46379 1132 aa29.95■■■□□ 2.39
ARPC1B-218ENST00000484375 ACSBG1Q96GR2 724 aa29.94■■■□□ 2.38
ARPC1B-218ENST00000484375 MAP3K5Q99683 1374 aa29.92■■■□□ 2.38
ARPC1B-218ENST00000484375 ADAMTS7Q9UKP4 1686 aa29.92■■■□□ 2.38
ARPC1B-218ENST00000484375 SYTL4Q96C24 671 aaPredicted RBP29.91■■■□□ 2.38
ARPC1B-218ENST00000484375 PLEKHF1Q96S99 279 aa29.91■■■□□ 2.38
ARPC1B-218ENST00000484375 ERVV-2B6SEH9 535 aa29.9■■■□□ 2.38
ARPC1B-218ENST00000484375 APBA3O96018 575 aa29.9■■■□□ 2.38
ARPC1B-218ENST00000484375 PHACTR3Q96KR7 559 aa29.9■■■□□ 2.38
ARPC1B-218ENST00000484375 KDM6AO15550 1401 aaPredicted RBP29.89■■■□□ 2.38
ARPC1B-218ENST00000484375 GNAT3A8MTJ3 354 aa29.89■■■□□ 2.38
ARPC1B-218ENST00000484375 PRIM1P49642 420 aaKnown RBP29.89■■■□□ 2.38
ARPC1B-218ENST00000484375 ADAMTS8Q9UP79 889 aa29.89■■■□□ 2.38
ARPC1B-218ENST00000484375 KCNQ2O43526 872 aa29.88■■■□□ 2.37
ARPC1B-218ENST00000484375 CCDC184Q52MB2 194 aa29.87■■■□□ 2.37
ARPC1B-218ENST00000484375 DLG5Q8TDM6 1919 aa29.86■■■□□ 2.37
ARPC1B-218ENST00000484375 CCER2I3L3R5 266 aa29.86■■■□□ 2.37
ARPC1B-218ENST00000484375 PLSCR1O15162 318 aa29.86■■■□□ 2.37
ARPC1B-218ENST00000484375 RUNDC1Q96C34 613 aa29.86■■■□□ 2.37
ARPC1B-218ENST00000484375 TMOD3Q9NYL9 352 aa29.86■■■□□ 2.37
ARPC1B-218ENST00000484375 MPRIPQ6WCQ1 1025 aa29.85■■■□□ 2.37
ARPC1B-218ENST00000484375 PNISRQ8TF01 805 aaKnown RBP29.85■■■□□ 2.37
ARPC1B-218ENST00000484375 MRC1P22897 1456 aa29.85■■■□□ 2.37
ARPC1B-218ENST00000484375 HTATSF1O43719 755 aaKnown RBP29.84■■■□□ 2.37
ARPC1B-218ENST00000484375 RTF1Q92541 710 aaKnown RBP29.84■■■□□ 2.37
ARPC1B-218ENST00000484375 NFE2L2Q16236 605 aa29.83■■■□□ 2.37
ARPC1B-218ENST00000484375 RREB1Q92766 1687 aa29.82■■■□□ 2.36
ARPC1B-218ENST00000484375 RNMTO43148 476 aaKnown RBP29.81■■■□□ 2.36
ARPC1B-218ENST00000484375 CABP4P57796 275 aa29.81■■■□□ 2.36
ARPC1B-218ENST00000484375 LY75O60449 1722 aa29.8■■■□□ 2.36
ARPC1B-218ENST00000484375 PTF1AQ7RTS3 328 aa29.8■■■□□ 2.36
ARPC1B-218ENST00000484375 DEFB132Q7Z7B7 95 aa29.8■■■□□ 2.36
ARPC1B-218ENST00000484375 LMOD3Q0VAK6 560 aa29.79■■■□□ 2.36
ARPC1B-218ENST00000484375 SMARCC1Q92922 1105 aaPredicted RBP29.79■■■□□ 2.36
ARPC1B-218ENST00000484375 EN1Q05925 392 aaPredicted RBP29.78■■■□□ 2.36
ARPC1B-218ENST00000484375 CCDC146Q8IYE0 955 aa29.78■■■□□ 2.36
ARPC1B-218ENST00000484375 CEMIPQ8WUJ3 1361 aa29.77■■■□□ 2.36
ARPC1B-218ENST00000484375 PIGBQ92521 554 aa29.77■■■□□ 2.36
ARPC1B-218ENST00000484375 CAMKK2Q96RR4 588 aa29.77■■■□□ 2.36
ARPC1B-218ENST00000484375 SLC52A2Q9HAB3 445 aa29.77■■■□□ 2.36
ARPC1B-218ENST00000484375 SIPA1L3O60292 1781 aaPredicted RBP29.77■■■□□ 2.36
ARPC1B-218ENST00000484375 HMGB2P26583 209 aaKnown RBP29.76■■■□□ 2.35
ARPC1B-218ENST00000484375 TEFQ10587 303 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms