RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 MCCD1P59942 119 aaPredicted RBP10.6□□□□□ -0.71
SCAF11-207ENST00000484275 RNF20Q5VTR2 975 aa10.6□□□□□ -0.71
SCAF11-207ENST00000484275 LYSMD3Q7Z3D4 306 aa10.6□□□□□ -0.71
SCAF11-207ENST00000484275 PRICKLE2Q7Z3G6 844 aa10.6□□□□□ -0.71
SCAF11-207ENST00000484275 CUEDC1Q9NWM3 386 aaPredicted RBP10.6□□□□□ -0.71
SCAF11-207ENST00000484275 A0A1W2PRU2 124 aa10.59□□□□□ -0.71
SCAF11-207ENST00000484275 PCDHB11Q9Y5F2 797 aa10.59□□□□□ -0.71
SCAF11-207ENST00000484275 CDC14CA4D256 554 aa10.58□□□□□ -0.72
SCAF11-207ENST00000484275 MEN1O00255 615 aa10.58□□□□□ -0.72
SCAF11-207ENST00000484275 PRKCSHP14314 528 aaPredicted RBP10.58□□□□□ -0.72
SCAF11-207ENST00000484275 RHOQP17081 205 aa10.58□□□□□ -0.72
SCAF11-207ENST00000484275 CCDC125Q86Z20 511 aa10.58□□□□□ -0.72
SCAF11-207ENST00000484275 OSBPL3Q9H4L5 887 aa10.58□□□□□ -0.72
SCAF11-207ENST00000484275 APBB1O00213 710 aa10.57□□□□□ -0.72
SCAF11-207ENST00000484275 TRAK2O60296 914 aa10.57□□□□□ -0.72
SCAF11-207ENST00000484275 IRF5Q13568 498 aa10.57□□□□□ -0.72
SCAF11-207ENST00000484275 ZNF330Q9Y3S2 320 aaPredicted RBP10.57□□□□□ -0.72
SCAF11-207ENST00000484275 SV2AQ7L0J3 742 aa10.56□□□□□ -0.72
SCAF11-207ENST00000484275 CCDC85AQ96PX6 553 aaPredicted RBP10.56□□□□□ -0.72
SCAF11-207ENST00000484275 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
SCAF11-207ENST00000484275 CEP126Q9P2H0 1117 aa10.56□□□□□ -0.72
SCAF11-207ENST00000484275 TRIM52Q96A61 297 aa10.55□□□□□ -0.72
SCAF11-207ENST00000484275 GPC1P35052 558 aa10.54□□□□□ -0.72
SCAF11-207ENST00000484275 CLN3Q13286 438 aa10.53□□□□□ -0.72
SCAF11-207ENST00000484275 TSGA10IPQ3SY00 556 aa10.53□□□□□ -0.72
SCAF11-207ENST00000484275 CYP2U1Q7Z449 544 aa10.53□□□□□ -0.72
SCAF11-207ENST00000484275 ZNF592Q92610 1267 aa10.53□□□□□ -0.72
SCAF11-207ENST00000484275 GRIP2Q9C0E4 1043 aa10.53□□□□□ -0.72
SCAF11-207ENST00000484275 ARHGEF10LQ9HCE6 1279 aa10.53□□□□□ -0.72
SCAF11-207ENST00000484275 RAB6BQ9NRW1 208 aa10.52□□□□□ -0.73
SCAF11-207ENST00000484275 POU4F2Q12837 409 aa10.51□□□□□ -0.73
SCAF11-207ENST00000484275 WHAMMQ8TF30 809 aa10.51□□□□□ -0.73
SCAF11-207ENST00000484275 GAS6Q14393 721 aa10.5□□□□□ -0.73
SCAF11-207ENST00000484275 ZNF385CQ66K41 422 aaPredicted RBP10.5□□□□□ -0.73
SCAF11-207ENST00000484275 PHTF2Q8N3S3 785 aa10.5□□□□□ -0.73
SCAF11-207ENST00000484275 NLRP3Q96P20 1036 aa10.5□□□□□ -0.73
SCAF11-207ENST00000484275 IL2RAP01589 272 aa10.49□□□□□ -0.73
SCAF11-207ENST00000484275 SLURP2P0DP57 97 aa10.49□□□□□ -0.73
SCAF11-207ENST00000484275 SLC27A3Q5K4L6 730 aa10.49□□□□□ -0.73
SCAF11-207ENST00000484275 ZNF837Q96EG3 531 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-207ENST00000484275 GDPD2Q9HCC8 539 aa10.49□□□□□ -0.73
SCAF11-207ENST00000484275 VAC14Q08AM6 782 aa10.48□□□□□ -0.73
SCAF11-207ENST00000484275 DBN1Q16643 649 aa10.48□□□□□ -0.73
SCAF11-207ENST00000484275 GNRH1P01148 92 aa10.47□□□□□ -0.73
SCAF11-207ENST00000484275 GSK3AP49840 483 aa10.47□□□□□ -0.73
SCAF11-207ENST00000484275 NBPF10Q6P3W6 841 aaKnown RBP10.47□□□□□ -0.73
SCAF11-207ENST00000484275 TRIM22Q8IYM9 498 aa10.47□□□□□ -0.73
SCAF11-207ENST00000484275 NBPF15Q8N660 670 aa10.47□□□□□ -0.73
SCAF11-207ENST00000484275 HRH3Q9Y5N1 445 aa10.47□□□□□ -0.73
SCAF11-207ENST00000484275 SPATA31C2B4DYI2 1134 aa10.46□□□□□ -0.73
SCAF11-207ENST00000484275 EIF4G2P78344 907 aaKnown RBP eCLIP10.46□□□□□ -0.73
SCAF11-207ENST00000484275 CNKSR1Q969H4 720 aa10.46□□□□□ -0.73
SCAF11-207ENST00000484275 DYRK1BQ9Y463 629 aa10.46□□□□□ -0.73
SCAF11-207ENST00000484275 GPR25O00155 361 aa10.45□□□□□ -0.74
SCAF11-207ENST00000484275 STAU1O95793 577 aaKnown RBP10.45□□□□□ -0.74
SCAF11-207ENST00000484275 ABL2P42684 1182 aa10.45□□□□□ -0.74
SCAF11-207ENST00000484275 MCM6Q14566 821 aa10.45□□□□□ -0.74
SCAF11-207ENST00000484275 RIPOR1Q6ZS17 1223 aa10.45□□□□□ -0.74
SCAF11-207ENST00000484275 ESYT1Q9BSJ8 1104 aa10.45□□□□□ -0.74
SCAF11-207ENST00000484275 ESF1Q9H501 851 aaKnown RBP10.45□□□□□ -0.74
SCAF11-207ENST00000484275 ADAMTS8Q9UP79 889 aa10.45□□□□□ -0.74
SCAF11-207ENST00000484275 CENPCQ03188 943 aa10.44□□□□□ -0.74
SCAF11-207ENST00000484275 GAS2L1Q99501 681 aaPredicted RBP10.44□□□□□ -0.74
SCAF11-207ENST00000484275 PRM3Q9NNZ6 103 aa10.44□□□□□ -0.74
SCAF11-207ENST00000484275 CHIC2Q9UKJ5 165 aa10.44□□□□□ -0.74
SCAF11-207ENST00000484275 ARHGEF15O94989 841 aa10.43□□□□□ -0.74
SCAF11-207ENST00000484275 ADAMTS2O95450 1211 aa10.43□□□□□ -0.74
SCAF11-207ENST00000484275 MYCP01106 439 aaPredicted RBP10.43□□□□□ -0.74
SCAF11-207ENST00000484275 SVOPQ8N4V2 548 aa10.43□□□□□ -0.74
SCAF11-207ENST00000484275 DOLKQ9UPQ8 538 aa10.43□□□□□ -0.74
SCAF11-207ENST00000484275 WASLO00401 505 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-207ENST00000484275 TAS1R3Q7RTX0 852 aa10.42□□□□□ -0.74
SCAF11-207ENST00000484275 RNF135Q8IUD6 432 aa10.42□□□□□ -0.74
SCAF11-207ENST00000484275 XAGE2Q96GT9 111 aa10.42□□□□□ -0.74
SCAF11-207ENST00000484275 FHDC1Q9C0D6 1143 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-207ENST00000484275 SRSF11Q05519 484 aaKnown RBP10.41□□□□□ -0.74
SCAF11-207ENST00000484275 KCNMA1Q12791 1236 aa10.41□□□□□ -0.74
SCAF11-207ENST00000484275 SLFNL1Q499Z3 407 aa10.41□□□□□ -0.74
SCAF11-207ENST00000484275 WDR44Q5JSH3 913 aa10.41□□□□□ -0.74
SCAF11-207ENST00000484275 LYPD4Q6UWN0 246 aa10.41□□□□□ -0.74
SCAF11-207ENST00000484275 GMCL1Q96IK5 515 aa10.41□□□□□ -0.74
SCAF11-207ENST00000484275 TIMMDC1Q9NPL8 285 aa10.41□□□□□ -0.74
SCAF11-207ENST00000484275 THBS1P07996 1170 aa10.4□□□□□ -0.74
SCAF11-207ENST00000484275 GTPBP3Q969Y2 492 aaKnown RBP10.4□□□□□ -0.74
SCAF11-207ENST00000484275 ETNK1Q9HBU6 452 aa10.4□□□□□ -0.74
SCAF11-207ENST00000484275 PHKA2P46019 1235 aa10.39□□□□□ -0.75
SCAF11-207ENST00000484275 USP4Q13107 963 aa10.39□□□□□ -0.75
SCAF11-207ENST00000484275 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
SCAF11-207ENST00000484275 F11P03951 625 aa10.38□□□□□ -0.75
SCAF11-207ENST00000484275 ZSCAN10Q96SZ4 725 aaPredicted RBP10.38□□□□□ -0.75
SCAF11-207ENST00000484275 H7C1W4 665 aa10.37□□□□□ -0.75
SCAF11-207ENST00000484275 MBIPQ9NS73 344 aa10.37□□□□□ -0.75
SCAF11-207ENST00000484275 COG6Q9Y2V7 657 aa10.37□□□□□ -0.75
SCAF11-207ENST00000484275 CELA2BP08218 269 aaPredicted RBP10.36□□□□□ -0.75
SCAF11-207ENST00000484275 WASHC4Q2M389 1173 aa10.36□□□□□ -0.75
SCAF11-207ENST00000484275 C4orf17Q53FE4 359 aa10.36□□□□□ -0.75
SCAF11-207ENST00000484275 IGF1RP08069 1367 aa10.36□□□□□ -0.75
SCAF11-207ENST00000484275 SCNN1DP51172 638 aa10.35□□□□□ -0.75
SCAF11-207ENST00000484275 ESCO1Q5FWF5 840 aa10.35□□□□□ -0.75
SCAF11-207ENST00000484275 PLPP7Q8NBV4 271 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms