RNA–Protein interactions for RNA: ENST00000484050.1

LYSMD4-207, Transcript of LysM domain containing 4, humanhuman

TSL 4

Gene LYSMD4, Length 551 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-207ENST00000484050 CGNL1Q0VF96 1302 aa34.44■■■■□ 3.1
LYSMD4-207ENST00000484050 MAP2P11137 1827 aaKnown RBP34.43■■■■□ 3.1
LYSMD4-207ENST00000484050 CASZ1Q86V15 1759 aa34.42■■■■□ 3.1
LYSMD4-207ENST00000484050 DOT1LQ8TEK3 1739 aa34.42■■■■□ 3.1
LYSMD4-207ENST00000484050 ZCRB1Q8TBF4 217 aaKnown RBP34.41■■■■□ 3.1
LYSMD4-207ENST00000484050 PAPPAQ13219 1627 aa34.35■■■■□ 3.09
LYSMD4-207ENST00000484050 PPM1GO15355 546 aaPredicted RBP34.35■■■■□ 3.09
LYSMD4-207ENST00000484050 RAPGEF4Q8WZA2 1011 aa34.35■■■■□ 3.09
LYSMD4-207ENST00000484050 SPON1Q9HCB6 807 aa34.34■■■■□ 3.09
LYSMD4-207ENST00000484050 STK32BQ9NY57 414 aa34.34■■■■□ 3.09
LYSMD4-207ENST00000484050 PDGFDQ9GZP0 370 aaPredicted RBP34.33■■■■□ 3.09
LYSMD4-207ENST00000484050 SLC15A2Q16348 729 aa34.32■■■■□ 3.08
LYSMD4-207ENST00000484050 PANK3Q9H999 370 aa34.32■■■■□ 3.08
LYSMD4-207ENST00000484050 TATP17735 454 aaPredicted RBP34.31■■■■□ 3.08
LYSMD4-207ENST00000484050 PRIM1P49642 420 aaKnown RBP34.3■■■■□ 3.08
LYSMD4-207ENST00000484050 SYTL4Q96C24 671 aaPredicted RBP34.3■■■■□ 3.08
LYSMD4-207ENST00000484050 WASHC2AQ641Q2 1341 aa34.3■■■■□ 3.08
LYSMD4-207ENST00000484050 POLKQ9UBT6 870 aa34.29■■■■□ 3.08
LYSMD4-207ENST00000484050 NSD2O96028 1365 aa34.28■■■■□ 3.08
LYSMD4-207ENST00000484050 LRRC4BQ9NT99 713 aa34.27■■■■□ 3.08
LYSMD4-207ENST00000484050 NCAPD2Q15021 1401 aa34.27■■■■□ 3.08
LYSMD4-207ENST00000484050 PKD1L3Q7Z443 1732 aa34.27■■■■□ 3.08
LYSMD4-207ENST00000484050 TNNT2P45379 298 aaPredicted RBP34.26■■■■□ 3.08
LYSMD4-207ENST00000484050 LY75O60449 1722 aa34.25■■■■□ 3.07
LYSMD4-207ENST00000484050 PCDH11XQ9BZA7 1347 aa34.24■■■■□ 3.07
LYSMD4-207ENST00000484050 PCDH11YQ9BZA8 1340 aa34.24■■■■□ 3.07
LYSMD4-207ENST00000484050 ZBTB7AO95365 584 aa34.22■■■■□ 3.07
LYSMD4-207ENST00000484050 PPP1R1BQ9UD71 204 aaPredicted RBP34.22■■■■□ 3.07
LYSMD4-207ENST00000484050 ZNF827Q17R98 1081 aa34.2■■■■□ 3.07
LYSMD4-207ENST00000484050 EYA1Q99502 592 aa34.2■■■■□ 3.07
LYSMD4-207ENST00000484050 SLC27A3Q5K4L6 730 aa34.19■■■■□ 3.06
LYSMD4-207ENST00000484050 TOGARAM1Q9Y4F4 1720 aa34.18■■■■□ 3.06
LYSMD4-207ENST00000484050 CYP27B1O15528 508 aa34.18■■■■□ 3.06
LYSMD4-207ENST00000484050 KCNQ4P56696 695 aa34.16■■■■□ 3.06
LYSMD4-207ENST00000484050 ATF5Q9Y2D1 282 aaPredicted RBP34.16■■■■□ 3.06
LYSMD4-207ENST00000484050 QSER1Q2KHR3 1735 aa34.16■■■■□ 3.06
LYSMD4-207ENST00000484050 KIF7Q2M1P5 1343 aa34.15■■■■□ 3.06
LYSMD4-207ENST00000484050 EIF4A2Q14240 407 aaKnown RBP34.15■■■■□ 3.06
LYSMD4-207ENST00000484050 ITGB4P16144 1822 aa34.15■■■■□ 3.06
LYSMD4-207ENST00000484050 PTGER2P43116 358 aa34.14■■■■□ 3.06
LYSMD4-207ENST00000484050 TUBGCP6Q96RT7 1819 aa34.14■■■■□ 3.06
LYSMD4-207ENST00000484050 AKT1S1Q96B36 256 aa34.13■■■■□ 3.05
LYSMD4-207ENST00000484050 MTFR1LQ9H019 292 aa34.11■■■■□ 3.05
LYSMD4-207ENST00000484050 KNSTRNQ9Y448 316 aa34.11■■■■□ 3.05
LYSMD4-207ENST00000484050 MORC1Q86VD1 984 aa34.1■■■■□ 3.05
LYSMD4-207ENST00000484050 SPG7Q9UQ90 795 aa34.1■■■■□ 3.05
LYSMD4-207ENST00000484050 CCNL1Q9UK58 526 aaPredicted RBP34.08■■■■□ 3.05
LYSMD4-207ENST00000484050 MPRIPQ6WCQ1 1025 aa34.06■■■■□ 3.04
LYSMD4-207ENST00000484050 NKX1-1Q15270 411 aaPredicted RBP34.05■■■■□ 3.04
LYSMD4-207ENST00000484050 SGIP1Q9BQI5 828 aa34.05■■■■□ 3.04
LYSMD4-207ENST00000484050 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.05■■■■□ 3.04
LYSMD4-207ENST00000484050 IGSF1Q8N6C5 1336 aa34.04■■■■□ 3.04
LYSMD4-207ENST00000484050 C5P01031 1676 aa34.04■■■■□ 3.04
LYSMD4-207ENST00000484050 PNPLA7Q6ZV29 1317 aa34.04■■■■□ 3.04
LYSMD4-207ENST00000484050 AMER1Q5JTC6 1135 aaPredicted RBP34.02■■■■□ 3.04
LYSMD4-207ENST00000484050 TFCP2L1Q9NZI6 479 aa34.02■■■■□ 3.04
LYSMD4-207ENST00000484050 TAF1LQ8IZX4 1826 aa34.02■■■■□ 3.04
LYSMD4-207ENST00000484050 PALLDQ8WX93 1383 aa34.01■■■■□ 3.04
LYSMD4-207ENST00000484050 PLEKHG2Q9H7P9 1386 aa33.98■■■■□ 3.03
LYSMD4-207ENST00000484050 PHKG2P15735 406 aa33.98■■■■□ 3.03
LYSMD4-207ENST00000484050 IFNL2Q8IZJ0 200 aa33.98■■■■□ 3.03
LYSMD4-207ENST00000484050 COL24A1Q17RW2 1714 aa33.98■■■■□ 3.03
LYSMD4-207ENST00000484050 PIGBQ92521 554 aa33.97■■■■□ 3.03
LYSMD4-207ENST00000484050 SLC16A10Q8TF71 515 aa33.96■■■■□ 3.03
LYSMD4-207ENST00000484050 FHDC1Q9C0D6 1143 aaPredicted RBP33.95■■■■□ 3.03
LYSMD4-207ENST00000484050 PER1O15534 1290 aaPredicted RBP33.94■■■■□ 3.02
LYSMD4-207ENST00000484050 SMARCC1Q92922 1105 aaPredicted RBP33.94■■■■□ 3.02
LYSMD4-207ENST00000484050 ARXQ96QS3 562 aa33.92■■■■□ 3.02
LYSMD4-207ENST00000484050 AEBP1Q8IUX7 1158 aa33.91■■■■□ 3.02
LYSMD4-207ENST00000484050 SYT17Q9BSW7 474 aa33.91■■■■□ 3.02
LYSMD4-207ENST00000484050 TMOD3Q9NYL9 352 aa33.91■■■■□ 3.02
LYSMD4-207ENST00000484050 C4BP0C0L5 1744 aa33.9■■■■□ 3.02
LYSMD4-207ENST00000484050 COL23A1Q86Y22 540 aaPredicted RBP33.88■■■■□ 3.01
LYSMD4-207ENST00000484050 DCAF8L1A6NGE4 600 aa33.87■■■■□ 3.01
LYSMD4-207ENST00000484050 IL13P35225 146 aa33.87■■■■□ 3.01
LYSMD4-207ENST00000484050 PLEKHO1Q53GL0 409 aaPredicted RBP33.87■■■■□ 3.01
LYSMD4-207ENST00000484050 CC2D1BQ5T0F9 858 aaKnown RBP33.86■■■■□ 3.01
LYSMD4-207ENST00000484050 ASAP1Q9ULH1 1129 aa33.85■■■■□ 3.01
LYSMD4-207ENST00000484050 MSH5O43196 834 aa33.84■■■■□ 3.01
LYSMD4-207ENST00000484050 HMGB2P26583 209 aaKnown RBP33.84■■■■□ 3.01
LYSMD4-207ENST00000484050 MTHFSP49914 203 aa33.84■■■■□ 3.01
LYSMD4-207ENST00000484050 SULT6B1Q6IMI4 303 aa33.84■■■■□ 3.01
LYSMD4-207ENST00000484050 ZNF530Q6P9A1 599 aaPredicted RBP33.84■■■■□ 3.01
LYSMD4-207ENST00000484050 KDRP35968 1356 aa33.84■■■■□ 3.01
LYSMD4-207ENST00000484050 POLD1P28340 1107 aa33.83■■■■□ 3.01
LYSMD4-207ENST00000484050 AMOTQ4VCS5 1084 aa33.83■■■■□ 3.01
LYSMD4-207ENST00000484050 UBR3Q6ZT12 1888 aa33.83■■■■□ 3.01
LYSMD4-207ENST00000484050 MAP3K5Q99683 1374 aa33.83■■■■□ 3.01
LYSMD4-207ENST00000484050 LOC102724428A0A0B4J2F2 783 aa33.82■■■■□ 3
LYSMD4-207ENST00000484050 SIK1P57059 783 aa33.82■■■■□ 3
LYSMD4-207ENST00000484050 KDM6AO15550 1401 aaPredicted RBP33.81■■■■□ 3
LYSMD4-207ENST00000484050 DCAF5Q96JK2 942 aa33.81■■■■□ 3
LYSMD4-207ENST00000484050 HSP90AB1P08238 724 aaKnown RBP33.8■■■■□ 3
LYSMD4-207ENST00000484050 ATG3Q9NT62 314 aa33.8■■■■□ 3
LYSMD4-207ENST00000484050 ERVV-2B6SEH9 535 aa33.79■■■■□ 3
LYSMD4-207ENST00000484050 AK7Q96M32 723 aa33.78■■■■□ 3
LYSMD4-207ENST00000484050 NPC1L1Q9UHC9 1359 aa33.77■■■■□ 3
LYSMD4-207ENST00000484050 AMIGO3Q86WK7 504 aa33.77■■■■□ 3
LYSMD4-207ENST00000484050 LINC00116Q8NCU8 138 aa33.77■■■■□ 3
LYSMD4-207ENST00000484050 FLAD1Q8NFF5 587 aa33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms