RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 EP400Q96L91 3159 aa26.14■■□□□ 1.77
SNED1-210ENST00000483962 PKD1L3Q7Z443 1732 aa26.14■■□□□ 1.77
SNED1-210ENST00000483962 U2SURPO15042 1029 aaKnown RBP26.13■■□□□ 1.77
SNED1-210ENST00000483962 ANP32CO43423 234 aa26.13■■□□□ 1.77
SNED1-210ENST00000483962 ZCRB1Q8TBF4 217 aaKnown RBP26.13■■□□□ 1.77
SNED1-210ENST00000483962 HMOX1P09601 288 aa26.12■■□□□ 1.77
SNED1-210ENST00000483962 NUDCQ9Y266 331 aa26.1■■□□□ 1.77
SNED1-210ENST00000483962 DDX54Q8TDD1 881 aaKnown RBP26.09■■□□□ 1.77
SNED1-210ENST00000483962 U2AF1L5P0DN76 240 aaPredicted RBP26.06■■□□□ 1.76
SNED1-210ENST00000483962 U2AF1Q01081 240 aaKnown RBP eCLIP26.06■■□□□ 1.76
SNED1-210ENST00000483962 FAM196AQ6ZSG2 479 aa26.06■■□□□ 1.76
SNED1-210ENST00000483962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.06■■□□□ 1.76
SNED1-210ENST00000483962 SBF2Q86WG5 1849 aa26.06■■□□□ 1.76
SNED1-210ENST00000483962 PLEKHG2Q9H7P9 1386 aa26.06■■□□□ 1.76
SNED1-210ENST00000483962 SOCS7O14512 581 aa26.04■■□□□ 1.76
SNED1-210ENST00000483962 CYP27B1O15528 508 aa26.04■■□□□ 1.76
SNED1-210ENST00000483962 CCDC184Q52MB2 194 aa26.04■■□□□ 1.76
SNED1-210ENST00000483962 SPG7Q9UQ90 795 aa26.04■■□□□ 1.76
SNED1-210ENST00000483962 UPF1Q92900 1129 aaKnown RBP eCLIP26.03■■□□□ 1.76
SNED1-210ENST00000483962 RSPH6AQ9H0K4 717 aa26.03■■□□□ 1.76
SNED1-210ENST00000483962 PCDH11XQ9BZA7 1347 aa26.03■■□□□ 1.76
SNED1-210ENST00000483962 PCDH11YQ9BZA8 1340 aa26.03■■□□□ 1.76
SNED1-210ENST00000483962 BCL9O00512 1426 aa26.03■■□□□ 1.76
SNED1-210ENST00000483962 PLEKHO1Q53GL0 409 aaPredicted RBP26.02■■□□□ 1.76
SNED1-210ENST00000483962 PRKAR2BP31323 418 aa25.99■■□□□ 1.75
SNED1-210ENST00000483962 AMOTQ4VCS5 1084 aa25.99■■□□□ 1.75
SNED1-210ENST00000483962 FCHSD2O94868 740 aa25.98■■□□□ 1.75
SNED1-210ENST00000483962 TRIM37O94972 964 aa25.98■■□□□ 1.75
SNED1-210ENST00000483962 KAT6BQ8WYB5 2073 aa25.98■■□□□ 1.75
SNED1-210ENST00000483962 PHKG2P15735 406 aa25.97■■□□□ 1.75
SNED1-210ENST00000483962 DIEXFQ68CQ4 756 aaKnown RBP25.97■■□□□ 1.75
SNED1-210ENST00000483962 ZNF530Q6P9A1 599 aaPredicted RBP25.97■■□□□ 1.75
SNED1-210ENST00000483962 DOT1LQ8TEK3 1739 aa25.97■■□□□ 1.75
SNED1-210ENST00000483962 TNS1Q9HBL0 1735 aaKnown RBP25.97■■□□□ 1.75
SNED1-210ENST00000483962 PTF1AQ7RTS3 328 aa25.96■■□□□ 1.75
SNED1-210ENST00000483962 IFNL2Q8IZJ0 200 aa25.96■■□□□ 1.75
SNED1-210ENST00000483962 PHACTR3Q96KR7 559 aa25.96■■□□□ 1.75
SNED1-210ENST00000483962 MTHFSDQ2M296 383 aaKnown RBP25.95■■□□□ 1.74
SNED1-210ENST00000483962 ACSBG1Q96GR2 724 aa25.95■■□□□ 1.74
SNED1-210ENST00000483962 NHSQ6T4R5 1651 aa25.95■■□□□ 1.74
SNED1-210ENST00000483962 TOGARAM1Q9Y4F4 1720 aa25.94■■□□□ 1.74
SNED1-210ENST00000483962 KCNQ2O43526 872 aa25.94■■□□□ 1.74
SNED1-210ENST00000483962 NKX1-1Q15270 411 aaPredicted RBP25.94■■□□□ 1.74
SNED1-210ENST00000483962 WDR43Q15061 677 aaKnown RBP eCLIP25.92■■□□□ 1.74
SNED1-210ENST00000483962 CCDC125Q86Z20 511 aa25.92■■□□□ 1.74
SNED1-210ENST00000483962 PLEKHF1Q96S99 279 aa25.92■■□□□ 1.74
SNED1-210ENST00000483962 BCL11BQ9C0K0 894 aaPredicted RBP25.91■■□□□ 1.74
SNED1-210ENST00000483962 MRS2Q9HD23 443 aa25.91■■□□□ 1.74
SNED1-210ENST00000483962 ADAMTS8Q9UP79 889 aa25.91■■□□□ 1.74
SNED1-210ENST00000483962 C1orf141Q5JVX7 400 aa25.9■■□□□ 1.74
SNED1-210ENST00000483962 ITGB4P16144 1822 aa25.9■■□□□ 1.74
SNED1-210ENST00000483962 PRIM1P49642 420 aaKnown RBP25.89■■□□□ 1.74
SNED1-210ENST00000483962 AKAP4Q5JQC9 854 aa25.89■■□□□ 1.74
SNED1-210ENST00000483962 BTAF1O14981 1849 aa25.88■■□□□ 1.73
SNED1-210ENST00000483962 VIRMAQ69YN4 1812 aaKnown RBP25.88■■□□□ 1.73
SNED1-210ENST00000483962 KDM6AO15550 1401 aaPredicted RBP25.88■■□□□ 1.73
SNED1-210ENST00000483962 SF3B2Q13435 895 aaKnown RBP25.87■■□□□ 1.73
SNED1-210ENST00000483962 GAS2L2Q8NHY3 880 aa25.87■■□□□ 1.73
SNED1-210ENST00000483962 SCN11AQ9UI33 1791 aa25.87■■□□□ 1.73
SNED1-210ENST00000483962 HSP90AB1P08238 724 aaKnown RBP25.86■■□□□ 1.73
SNED1-210ENST00000483962 MPRIPQ6WCQ1 1025 aa25.86■■□□□ 1.73
SNED1-210ENST00000483962 PNISRQ8TF01 805 aaKnown RBP25.86■■□□□ 1.73
SNED1-210ENST00000483962 DCAF5Q96JK2 942 aa25.86■■□□□ 1.73
SNED1-210ENST00000483962 APBA3O96018 575 aa25.85■■□□□ 1.73
SNED1-210ENST00000483962 DEFB132Q7Z7B7 95 aa25.85■■□□□ 1.73
SNED1-210ENST00000483962 SYTL4Q96C24 671 aaPredicted RBP25.85■■□□□ 1.73
SNED1-210ENST00000483962 PNNQ9H307 717 aaKnown RBP25.85■■□□□ 1.73
SNED1-210ENST00000483962 DLG5Q8TDM6 1919 aa25.84■■□□□ 1.73
SNED1-210ENST00000483962 ADAMTS7Q9UKP4 1686 aa25.83■■□□□ 1.73
SNED1-210ENST00000483962 CCDC146Q8IYE0 955 aa25.83■■□□□ 1.73
SNED1-210ENST00000483962 MAP3K5Q99683 1374 aa25.82■■□□□ 1.72
SNED1-210ENST00000483962 LGR6Q9HBX8 967 aa25.82■■□□□ 1.72
SNED1-210ENST00000483962 GNAT3A8MTJ3 354 aa25.81■■□□□ 1.72
SNED1-210ENST00000483962 NEFMP07197 916 aa25.81■■□□□ 1.72
SNED1-210ENST00000483962 BAG6P46379 1132 aa25.81■■□□□ 1.72
SNED1-210ENST00000483962 MAPK8IP3Q9UPT6 1336 aa25.81■■□□□ 1.72
SNED1-210ENST00000483962 ERVV-2B6SEH9 535 aa25.8■■□□□ 1.72
SNED1-210ENST00000483962 RNMTO43148 476 aaKnown RBP25.8■■□□□ 1.72
SNED1-210ENST00000483962 EN1Q05925 392 aaPredicted RBP25.8■■□□□ 1.72
SNED1-210ENST00000483962 MIER1Q8N108 512 aa25.8■■□□□ 1.72
SNED1-210ENST00000483962 RUNDC1Q96C34 613 aa25.8■■□□□ 1.72
SNED1-210ENST00000483962 NFE2L2Q16236 605 aa25.79■■□□□ 1.72
SNED1-210ENST00000483962 PIGBQ92521 554 aa25.79■■□□□ 1.72
SNED1-210ENST00000483962 IL17REQ8NFR9 667 aa25.78■■□□□ 1.72
SNED1-210ENST00000483962 CAMKK2Q96RR4 588 aa25.78■■□□□ 1.72
SNED1-210ENST00000483962 RGPD3A6NKT7 1758 aaPredicted RBP25.77■■□□□ 1.72
SNED1-210ENST00000483962 RGPD4Q7Z3J3 1758 aa25.77■■□□□ 1.72
SNED1-210ENST00000483962 CCER2I3L3R5 266 aa25.77■■□□□ 1.72
SNED1-210ENST00000483962 PLSCR1O15162 318 aa25.77■■□□□ 1.72
SNED1-210ENST00000483962 TMOD3Q9NYL9 352 aa25.77■■□□□ 1.72
SNED1-210ENST00000483962 CABP4P57796 275 aa25.76■■□□□ 1.71
SNED1-210ENST00000483962 EZH2Q15910 746 aaKnown RBP25.76■■□□□ 1.71
SNED1-210ENST00000483962 MRC1P22897 1456 aa25.75■■□□□ 1.71
SNED1-210ENST00000483962 TMPOP42166 694 aaKnown RBP25.74■■□□□ 1.71
SNED1-210ENST00000483962 NFATC2IPQ8NCF5 419 aa25.74■■□□□ 1.71
SNED1-210ENST00000483962 CEMIPQ8WUJ3 1361 aa25.73■■□□□ 1.71
SNED1-210ENST00000483962 SLC52A2Q9HAB3 445 aa25.73■■□□□ 1.71
SNED1-210ENST00000483962 LY75O60449 1722 aa25.73■■□□□ 1.71
SNED1-210ENST00000483962 RREB1Q92766 1687 aa25.73■■□□□ 1.71
SNED1-210ENST00000483962 SIPA1L3O60292 1781 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms