RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 NGEFQ8N5V2 710 aa27.39■■□□□ 1.97
RXRB-204ENST00000483281 QTRT2Q9H974 415 aaKnown RBP27.39■■□□□ 1.97
RXRB-204ENST00000483281 USP35Q9P2H5 1018 aa27.39■■□□□ 1.97
RXRB-204ENST00000483281 PARP4Q9UKK3 1724 aaKnown RBP27.38■■□□□ 1.97
RXRB-204ENST00000483281 PLEKHO1Q53GL0 409 aaPredicted RBP27.38■■□□□ 1.97
RXRB-204ENST00000483281 GJD4Q96KN9 370 aaPredicted RBP27.38■■□□□ 1.97
RXRB-204ENST00000483281 CCDC9Q9Y3X0 531 aaKnown RBP27.38■■□□□ 1.97
RXRB-204ENST00000483281 DISP2A7MBM2 1401 aa27.37■■□□□ 1.97
RXRB-204ENST00000483281 WNK3Q9BYP7 1800 aa27.37■■□□□ 1.97
RXRB-204ENST00000483281 APAF1O14727 1248 aa27.37■■□□□ 1.97
RXRB-204ENST00000483281 MEGF6O75095 1541 aa27.36■■□□□ 1.97
RXRB-204ENST00000483281 OVOS2A0A0G2JMS6 1433 aa27.36■■□□□ 1.97
RXRB-204ENST00000483281 TMPOP42166 694 aaKnown RBP27.34■■□□□ 1.97
RXRB-204ENST00000483281 NFE2L2Q16236 605 aa27.34■■□□□ 1.97
RXRB-204ENST00000483281 GAS2L2Q8NHY3 880 aa27.34■■□□□ 1.97
RXRB-204ENST00000483281 PKD1L3Q7Z443 1732 aa27.34■■□□□ 1.97
RXRB-204ENST00000483281 ONECUT3O60422 494 aaPredicted RBP27.33■■□□□ 1.97
RXRB-204ENST00000483281 MTHFSDQ2M296 383 aaKnown RBP27.33■■□□□ 1.97
RXRB-204ENST00000483281 SPG7Q9UQ90 795 aa27.33■■□□□ 1.97
RXRB-204ENST00000483281 GLI3P10071 1580 aa27.32■■□□□ 1.96
RXRB-204ENST00000483281 ZCRB1Q8TBF4 217 aaKnown RBP27.31■■□□□ 1.96
RXRB-204ENST00000483281 DLG5Q8TDM6 1919 aa27.3■■□□□ 1.96
RXRB-204ENST00000483281 CCDC27Q2M243 656 aa27.29■■□□□ 1.96
RXRB-204ENST00000483281 YTHDC1Q96MU7 727 aaKnown RBP27.29■■□□□ 1.96
RXRB-204ENST00000483281 RGS17Q9UGC6 210 aaPredicted RBP27.29■■□□□ 1.96
RXRB-204ENST00000483281 RIPK4P57078 832 aa27.28■■□□□ 1.96
RXRB-204ENST00000483281 EXOC5O00471 708 aa27.28■■□□□ 1.96
RXRB-204ENST00000483281 HTATSF1O43719 755 aaKnown RBP27.28■■□□□ 1.96
RXRB-204ENST00000483281 HNRNPUQ00839 825 aaKnown RBP eCLIP27.28■■□□□ 1.96
RXRB-204ENST00000483281 FAM98CQ17RN3 349 aaKnown RBP27.27■■□□□ 1.96
RXRB-204ENST00000483281 PHF23Q9BUL5 403 aaPredicted RBP27.27■■□□□ 1.96
RXRB-204ENST00000483281 RBM6P78332 1123 aaKnown RBP27.26■■□□□ 1.95
RXRB-204ENST00000483281 AKAP4Q5JQC9 854 aa27.26■■□□□ 1.95
RXRB-204ENST00000483281 ZNF530Q6P9A1 599 aaPredicted RBP27.25■■□□□ 1.95
RXRB-204ENST00000483281 THSD7AQ9UPZ6 1657 aa27.25■■□□□ 1.95
RXRB-204ENST00000483281 IFNL2Q8IZJ0 200 aa27.24■■□□□ 1.95
RXRB-204ENST00000483281 RRP7AQ9Y3A4 280 aaKnown RBP27.24■■□□□ 1.95
RXRB-204ENST00000483281 SHANK3Q9BYB0 1731 aa27.24■■□□□ 1.95
RXRB-204ENST00000483281 PCDH11XQ9BZA7 1347 aa27.24■■□□□ 1.95
RXRB-204ENST00000483281 PCDH11YQ9BZA8 1340 aa27.24■■□□□ 1.95
RXRB-204ENST00000483281 GNAT3A8MTJ3 354 aa27.24■■□□□ 1.95
RXRB-204ENST00000483281 LMOD3Q0VAK6 560 aa27.24■■□□□ 1.95
RXRB-204ENST00000483281 NEUROD2Q15784 382 aa27.24■■□□□ 1.95
RXRB-204ENST00000483281 TRIM35Q9UPQ4 493 aa27.24■■□□□ 1.95
RXRB-204ENST00000483281 DDB1Q16531 1140 aa27.23■■□□□ 1.95
RXRB-204ENST00000483281 C1orf141Q5JVX7 400 aa27.22■■□□□ 1.95
RXRB-204ENST00000483281 CYP27B1O15528 508 aa27.22■■□□□ 1.95
RXRB-204ENST00000483281 PHKG2P15735 406 aa27.22■■□□□ 1.95
RXRB-204ENST00000483281 MAP3K5Q99683 1374 aa27.21■■□□□ 1.95
RXRB-204ENST00000483281 TNS2Q63HR2 1409 aa27.21■■□□□ 1.95
RXRB-204ENST00000483281 LRRC37A3O60309 1634 aa27.21■■□□□ 1.95
RXRB-204ENST00000483281 NKX1-1Q15270 411 aaPredicted RBP27.2■■□□□ 1.95
RXRB-204ENST00000483281 HSP90AB1P08238 724 aaKnown RBP27.2■■□□□ 1.94
RXRB-204ENST00000483281 WWC1Q8IX03 1113 aa27.2■■□□□ 1.94
RXRB-204ENST00000483281 ZBED9Q6R2W3 1325 aa27.2■■□□□ 1.94
RXRB-204ENST00000483281 RXRBP28702 533 aa27.19■■□□□ 1.94
RXRB-204ENST00000483281 ZNF521Q96K83 1311 aa27.19■■□□□ 1.94
RXRB-204ENST00000483281 RTF1Q92541 710 aaKnown RBP27.18■■□□□ 1.94
RXRB-204ENST00000483281 POTEAQ6S8J7 498 aa27.17■■□□□ 1.94
RXRB-204ENST00000483281 SALL2Q9Y467 1007 aaPredicted RBP27.17■■□□□ 1.94
RXRB-204ENST00000483281 ADAMTS7Q9UKP4 1686 aa27.17■■□□□ 1.94
RXRB-204ENST00000483281 SENP3-EIF4A1A0A087X0R7 540 aa27.17■■□□□ 1.94
RXRB-204ENST00000483281 WDR63Q8IWG1 891 aa27.17■■□□□ 1.94
RXRB-204ENST00000483281 DDX54Q8TDD1 881 aaKnown RBP27.17■■□□□ 1.94
RXRB-204ENST00000483281 VIRMAQ69YN4 1812 aaKnown RBP27.16■■□□□ 1.94
RXRB-204ENST00000483281 SEPT12Q8IYM1 358 aa27.16■■□□□ 1.94
RXRB-204ENST00000483281 IL17REQ8NFR9 667 aa27.15■■□□□ 1.94
RXRB-204ENST00000483281 DCAF5Q96JK2 942 aa27.15■■□□□ 1.94
RXRB-204ENST00000483281 SCN11AQ9UI33 1791 aa27.14■■□□□ 1.94
RXRB-204ENST00000483281 CEMIPQ8WUJ3 1361 aa27.14■■□□□ 1.93
RXRB-204ENST00000483281 RNMTO43148 476 aaKnown RBP27.13■■□□□ 1.93
RXRB-204ENST00000483281 CALD1Q05682 793 aaKnown RBP27.13■■□□□ 1.93
RXRB-204ENST00000483281 PDE3BQ13370 1112 aa27.12■■□□□ 1.93
RXRB-204ENST00000483281 MPRIPQ6WCQ1 1025 aa27.12■■□□□ 1.93
RXRB-204ENST00000483281 MARCH10Q8NA82 808 aaPredicted RBP27.12■■□□□ 1.93
RXRB-204ENST00000483281 LGR6Q9HBX8 967 aa27.12■■□□□ 1.93
RXRB-204ENST00000483281 IL16Q14005 1332 aa27.12■■□□□ 1.93
RXRB-204ENST00000483281 MCM10Q7L590 875 aa27.11■■□□□ 1.93
RXRB-204ENST00000483281 A0A0G2JS52 829 aa27.11■■□□□ 1.93
RXRB-204ENST00000483281 DCTN1Q14203 1278 aa27.1■■□□□ 1.93
RXRB-204ENST00000483281 KDM6AO15550 1401 aaPredicted RBP27.09■■□□□ 1.93
RXRB-204ENST00000483281 ERVV-2B6SEH9 535 aa27.09■■□□□ 1.93
RXRB-204ENST00000483281 GOLGA2Q08379 1002 aa27.08■■□□□ 1.93
RXRB-204ENST00000483281 BRWD3Q6RI45 1802 aa27.08■■□□□ 1.93
RXRB-204ENST00000483281 BCL9O00512 1426 aa27.07■■□□□ 1.92
RXRB-204ENST00000483281 THUMPD2Q9BTF0 503 aaKnown RBP27.06■■□□□ 1.92
RXRB-204ENST00000483281 BABAM1Q9NWV8 329 aa27.06■■□□□ 1.92
RXRB-204ENST00000483281 ZNF853P0CG23 659 aa27.04■■□□□ 1.92
RXRB-204ENST00000483281 TAF7Q15545 349 aaPredicted RBP27.04■■□□□ 1.92
RXRB-204ENST00000483281 SIPA1L3O60292 1781 aaPredicted RBP27.04■■□□□ 1.92
RXRB-204ENST00000483281 TEFQ10587 303 aa27.04■■□□□ 1.92
RXRB-204ENST00000483281 CFAP44Q96MT7 982 aa27.04■■□□□ 1.92
RXRB-204ENST00000483281 GNAI1P63096 354 aa27.03■■□□□ 1.92
RXRB-204ENST00000483281 KRT27Q7Z3Y8 459 aa27.03■■□□□ 1.92
RXRB-204ENST00000483281 SLC52A2Q9HAB3 445 aa27.03■■□□□ 1.92
RXRB-204ENST00000483281 IFT57Q9NWB7 429 aa27.03■■□□□ 1.92
RXRB-204ENST00000483281 MRC1P22897 1456 aa27.03■■□□□ 1.92
RXRB-204ENST00000483281 SLFN5Q08AF3 891 aa27.02■■□□□ 1.92
RXRB-204ENST00000483281 E9PSI1 815 aa27.02■■□□□ 1.92
RXRB-204ENST00000483281 TRMT2AQ8IZ69 625 aaKnown RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms