RNA–Protein interactions for RNA: ENST00000483146.1

COMMD2-204, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-204ENST00000483146 ABL2P42684 1182 aa11.6□□□□□ -0.55
COMMD2-204ENST00000483146 ESF1Q9H501 851 aaKnown RBP11.6□□□□□ -0.55
COMMD2-204ENST00000483146 EIF4G2P78344 907 aaKnown RBP eCLIP11.59□□□□□ -0.55
COMMD2-204ENST00000483146 VAC14Q08AM6 782 aa11.59□□□□□ -0.55
COMMD2-204ENST00000483146 LYSMD3Q7Z3D4 306 aa11.59□□□□□ -0.55
COMMD2-204ENST00000483146 A0A1W2PRU2 124 aa11.58□□□□□ -0.56
COMMD2-204ENST00000483146 PRICKLE2Q7Z3G6 844 aa11.58□□□□□ -0.56
COMMD2-204ENST00000483146 ZSCAN1Q8NBB4 408 aa11.58□□□□□ -0.56
COMMD2-204ENST00000483146 MCM6Q14566 821 aa11.57□□□□□ -0.56
COMMD2-204ENST00000483146 CYP2U1Q7Z449 544 aa11.57□□□□□ -0.56
COMMD2-204ENST00000483146 CCDC85AQ96PX6 553 aaPredicted RBP11.57□□□□□ -0.56
COMMD2-204ENST00000483146 RHOQP17081 205 aa11.56□□□□□ -0.56
COMMD2-204ENST00000483146 LORP23490 312 aaPredicted RBP11.56□□□□□ -0.56
COMMD2-204ENST00000483146 RNF144AP50876 292 aaPredicted RBP11.56□□□□□ -0.56
COMMD2-204ENST00000483146 GPR161Q8N6U8 529 aaKnown RBP11.56□□□□□ -0.56
COMMD2-204ENST00000483146 CDCA7Q9BWT1 371 aaPredicted RBP11.56□□□□□ -0.56
COMMD2-204ENST00000483146 OSBPL3Q9H4L5 887 aa11.56□□□□□ -0.56
COMMD2-204ENST00000483146 SENP3-EIF4A1A0A087X0R7 540 aa11.55□□□□□ -0.56
COMMD2-204ENST00000483146 ITGA6P23229 1130 aa11.55□□□□□ -0.56
COMMD2-204ENST00000483146 CDC14CA4D256 554 aa11.54□□□□□ -0.56
COMMD2-204ENST00000483146 TRAK2O60296 914 aa11.54□□□□□ -0.56
COMMD2-204ENST00000483146 VWA5B2Q8N398 1253 aa11.54□□□□□ -0.56
COMMD2-204ENST00000483146 NLRP3Q96P20 1036 aa11.54□□□□□ -0.56
COMMD2-204ENST00000483146 ARHGEF10LQ9HCE6 1279 aa11.54□□□□□ -0.56
COMMD2-204ENST00000483146 TSGA10IPQ3SY00 556 aa11.53□□□□□ -0.56
COMMD2-204ENST00000483146 MYCP01106 439 aaPredicted RBP11.52□□□□□ -0.57
COMMD2-204ENST00000483146 SLFNL1Q499Z3 407 aa11.52□□□□□ -0.57
COMMD2-204ENST00000483146 SLC27A3Q5K4L6 730 aa11.52□□□□□ -0.57
COMMD2-204ENST00000483146 NANOS1Q8WY41 292 aaKnown RBP11.52□□□□□ -0.57
COMMD2-204ENST00000483146 RAB6BQ9NRW1 208 aa11.52□□□□□ -0.57
COMMD2-204ENST00000483146 GPC1P35052 558 aa11.51□□□□□ -0.57
COMMD2-204ENST00000483146 FAM181BA6NEQ2 426 aa11.5□□□□□ -0.57
COMMD2-204ENST00000483146 CLN3Q13286 438 aa11.5□□□□□ -0.57
COMMD2-204ENST00000483146 WASHC4Q2M389 1173 aa11.5□□□□□ -0.57
COMMD2-204ENST00000483146 SV2AQ7L0J3 742 aa11.5□□□□□ -0.57
COMMD2-204ENST00000483146 RNF135Q8IUD6 432 aa11.5□□□□□ -0.57
COMMD2-204ENST00000483146 PHTF2Q8N3S3 785 aa11.5□□□□□ -0.57
COMMD2-204ENST00000483146 CNTNAP3BQ96NU0 1288 aa11.5□□□□□ -0.57
COMMD2-204ENST00000483146 CNTNAP3Q9BZ76 1288 aa11.5□□□□□ -0.57
COMMD2-204ENST00000483146 DOLKQ9UPQ8 538 aa11.5□□□□□ -0.57
COMMD2-204ENST00000483146 KRT76Q01546 638 aa11.49□□□□□ -0.57
COMMD2-204ENST00000483146 POU4F2Q12837 409 aa11.49□□□□□ -0.57
COMMD2-204ENST00000483146 COL25A1Q9BXS0 654 aaPredicted RBP11.49□□□□□ -0.57
COMMD2-204ENST00000483146 COG6Q9Y2V7 657 aa11.49□□□□□ -0.57
COMMD2-204ENST00000483146 GNRH1P01148 92 aa11.47□□□□□ -0.57
COMMD2-204ENST00000483146 SEMA3FQ13275 785 aa11.47□□□□□ -0.57
COMMD2-204ENST00000483146 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
COMMD2-204ENST00000483146 GRIP2Q9C0E4 1043 aa11.47□□□□□ -0.57
COMMD2-204ENST00000483146 USP4Q13107 963 aa11.46□□□□□ -0.57
COMMD2-204ENST00000483146 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
COMMD2-204ENST00000483146 CUEDC1Q9NWM3 386 aaPredicted RBP11.46□□□□□ -0.57
COMMD2-204ENST00000483146 IL2RAP01589 272 aa11.45□□□□□ -0.58
COMMD2-204ENST00000483146 RNFT1Q5M7Z0 435 aa11.45□□□□□ -0.58
COMMD2-204ENST00000483146 RIPOR1Q6ZS17 1223 aa11.44□□□□□ -0.58
COMMD2-204ENST00000483146 POM121Q96HA1 1249 aa11.44□□□□□ -0.58
COMMD2-204ENST00000483146 ESYT1Q9BSJ8 1104 aa11.44□□□□□ -0.58
COMMD2-204ENST00000483146 STAU1O95793 577 aaKnown RBP11.43□□□□□ -0.58
COMMD2-204ENST00000483146 CENPCQ03188 943 aa11.43□□□□□ -0.58
COMMD2-204ENST00000483146 NBPF10Q6P3W6 841 aaKnown RBP11.43□□□□□ -0.58
COMMD2-204ENST00000483146 NBPF15Q8N660 670 aa11.43□□□□□ -0.58
COMMD2-204ENST00000483146 GAS2L1Q99501 681 aaPredicted RBP11.43□□□□□ -0.58
COMMD2-204ENST00000483146 SOX11P35716 441 aa11.42□□□□□ -0.58
COMMD2-204ENST00000483146 CHIC2Q9UKJ5 165 aa11.42□□□□□ -0.58
COMMD2-204ENST00000483146 DYRK1BQ9Y463 629 aa11.41□□□□□ -0.58
COMMD2-204ENST00000483146 SPATA31C2B4DYI2 1134 aa11.4□□□□□ -0.58
COMMD2-204ENST00000483146 WASLO00401 505 aaPredicted RBP11.4□□□□□ -0.58
COMMD2-204ENST00000483146 RAD21O60216 631 aa11.4□□□□□ -0.58
COMMD2-204ENST00000483146 TAS1R3Q7RTX0 852 aa11.4□□□□□ -0.58
COMMD2-204ENST00000483146 PLPP7Q8NBV4 271 aa11.4□□□□□ -0.58
COMMD2-204ENST00000483146 XAGE2Q96GT9 111 aa11.4□□□□□ -0.58
COMMD2-204ENST00000483146 TIMMDC1Q9NPL8 285 aa11.4□□□□□ -0.58
COMMD2-204ENST00000483146 ESCO1Q5FWF5 840 aa11.39□□□□□ -0.59
COMMD2-204ENST00000483146 WWC1Q8IX03 1113 aa11.39□□□□□ -0.59
COMMD2-204ENST00000483146 SIRT1Q96EB6 747 aa11.39□□□□□ -0.59
COMMD2-204ENST00000483146 ZNF837Q96EG3 531 aaPredicted RBP11.39□□□□□ -0.59
COMMD2-204ENST00000483146 ZSCAN10Q96SZ4 725 aaPredicted RBP11.39□□□□□ -0.59
COMMD2-204ENST00000483146 UBTFP17480 764 aaKnown RBP11.38□□□□□ -0.59
COMMD2-204ENST00000483146 PHKA2P46019 1235 aa11.38□□□□□ -0.59
COMMD2-204ENST00000483146 FLIIQ13045 1269 aa11.38□□□□□ -0.59
COMMD2-204ENST00000483146 DBN1Q16643 649 aa11.38□□□□□ -0.59
COMMD2-204ENST00000483146 MAP7D1Q3KQU3 841 aa11.38□□□□□ -0.59
COMMD2-204ENST00000483146 TRIM22Q8IYM9 498 aa11.38□□□□□ -0.59
COMMD2-204ENST00000483146 ETNK1Q9HBU6 452 aa11.38□□□□□ -0.59
COMMD2-204ENST00000483146 HRH3Q9Y5N1 445 aa11.38□□□□□ -0.59
COMMD2-204ENST00000483146 PIK3CDO00329 1044 aa11.37□□□□□ -0.59
COMMD2-204ENST00000483146 GPR25O00155 361 aa11.36□□□□□ -0.59
COMMD2-204ENST00000483146 GTF2E1P29083 439 aaPredicted RBP11.36□□□□□ -0.59
COMMD2-204ENST00000483146 WDR44Q5JSH3 913 aa11.36□□□□□ -0.59
COMMD2-204ENST00000483146 TMEM214Q6NUQ4 689 aaKnown RBP11.36□□□□□ -0.59
COMMD2-204ENST00000483146 FHDC1Q9C0D6 1143 aaPredicted RBP11.36□□□□□ -0.59
COMMD2-204ENST00000483146 H7C1W4 665 aa11.35□□□□□ -0.59
COMMD2-204ENST00000483146 GAS6Q14393 721 aa11.34□□□□□ -0.59
COMMD2-204ENST00000483146 GNASQ5JWF2 1037 aa11.34□□□□□ -0.59
COMMD2-204ENST00000483146 FOXR1Q6PIV2 292 aa11.34□□□□□ -0.59
COMMD2-204ENST00000483146 GTPBP3Q969Y2 492 aaKnown RBP11.34□□□□□ -0.59
COMMD2-204ENST00000483146 GMCL1Q96IK5 515 aa11.34□□□□□ -0.59
COMMD2-204ENST00000483146 ALG2Q9H553 416 aa11.34□□□□□ -0.59
COMMD2-204ENST00000483146 F11P03951 625 aa11.33□□□□□ -0.6
COMMD2-204ENST00000483146 SKIP12755 728 aa11.33□□□□□ -0.6
COMMD2-204ENST00000483146 TLR1Q15399 786 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms