RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 SEPT12Q8IYM1 358 aa7.5□□□□□ -1.21
LAPTM4A-202ENST00000483117 PTGIRP43119 386 aa7.49□□□□□ -1.21
LAPTM4A-202ENST00000483117 NR1H3Q13133 447 aa7.49□□□□□ -1.21
LAPTM4A-202ENST00000483117 RNF217Q8TC41 542 aa7.49□□□□□ -1.21
LAPTM4A-202ENST00000483117 NDUFB9Q9Y6M9 179 aa7.49□□□□□ -1.21
LAPTM4A-202ENST00000483117 RNF225M0QZC1 329 aaPredicted RBP7.48□□□□□ -1.21
LAPTM4A-202ENST00000483117 FOXD4L5Q5VV16 416 aaPredicted RBP7.48□□□□□ -1.21
LAPTM4A-202ENST00000483117 CCDC155Q8N6L0 562 aa7.48□□□□□ -1.21
LAPTM4A-202ENST00000483117 GPR161Q8N6U8 529 aaKnown RBP7.48□□□□□ -1.21
LAPTM4A-202ENST00000483117 SLC35F4A4IF30 521 aa7.47□□□□□ -1.21
LAPTM4A-202ENST00000483117 DNMT3AQ9Y6K1 912 aaPredicted RBP7.47□□□□□ -1.21
LAPTM4A-202ENST00000483117 SOCS7O14512 581 aa7.46□□□□□ -1.22
LAPTM4A-202ENST00000483117 PRKCSHP14314 528 aaPredicted RBP7.46□□□□□ -1.22
LAPTM4A-202ENST00000483117 Q8N3U1 123 aa7.45□□□□□ -1.22
LAPTM4A-202ENST00000483117 SENP3-EIF4A1A0A087X0R7 540 aa7.44□□□□□ -1.22
LAPTM4A-202ENST00000483117 ATP5J2-PTCD1G3V325 749 aa7.44□□□□□ -1.22
LAPTM4A-202ENST00000483117 SCTRP47872 440 aa7.44□□□□□ -1.22
LAPTM4A-202ENST00000483117 KRT76Q01546 638 aa7.44□□□□□ -1.22
LAPTM4A-202ENST00000483117 RNF20Q5VTR2 975 aa7.44□□□□□ -1.22
LAPTM4A-202ENST00000483117 CC2D2BQ6DHV5 1058 aa7.44□□□□□ -1.22
LAPTM4A-202ENST00000483117 TBC1D2BQ9UPU7 963 aa7.44□□□□□ -1.22
LAPTM4A-202ENST00000483117 ZNF330Q9Y3S2 320 aaPredicted RBP7.44□□□□□ -1.22
LAPTM4A-202ENST00000483117 PCDHB11Q9Y5F2 797 aa7.44□□□□□ -1.22
LAPTM4A-202ENST00000483117 CDC14CA4D256 554 aa7.43□□□□□ -1.22
LAPTM4A-202ENST00000483117 APBB1O00213 710 aa7.43□□□□□ -1.22
LAPTM4A-202ENST00000483117 ITGA6P23229 1130 aa7.43□□□□□ -1.22
LAPTM4A-202ENST00000483117 MCCD1P59942 119 aaPredicted RBP7.43□□□□□ -1.22
LAPTM4A-202ENST00000483117 ERVK-9P63128 1117 aa7.43□□□□□ -1.22
LAPTM4A-202ENST00000483117 FOXK2Q01167 660 aa7.43□□□□□ -1.22
LAPTM4A-202ENST00000483117 NANOS1Q8WY41 292 aaKnown RBP7.43□□□□□ -1.22
LAPTM4A-202ENST00000483117 CNTNAP3BQ96NU0 1288 aa7.43□□□□□ -1.22
LAPTM4A-202ENST00000483117 CNTNAP3Q9BZ76 1288 aa7.43□□□□□ -1.22
LAPTM4A-202ENST00000483117 MEN1O00255 615 aa7.42□□□□□ -1.22
LAPTM4A-202ENST00000483117 RHOQP17081 205 aa7.42□□□□□ -1.22
LAPTM4A-202ENST00000483117 LYSMD3Q7Z3D4 306 aa7.42□□□□□ -1.22
LAPTM4A-202ENST00000483117 PRICKLE2Q7Z3G6 844 aa7.42□□□□□ -1.22
LAPTM4A-202ENST00000483117 VWA5B2Q8N398 1253 aa7.42□□□□□ -1.22
LAPTM4A-202ENST00000483117 A0A1W2PRU2 124 aa7.41□□□□□ -1.22
LAPTM4A-202ENST00000483117 RNF144AP50876 292 aaPredicted RBP7.41□□□□□ -1.22
LAPTM4A-202ENST00000483117 TRIM52Q96A61 297 aa7.41□□□□□ -1.22
LAPTM4A-202ENST00000483117 COL25A1Q9BXS0 654 aaPredicted RBP7.41□□□□□ -1.22
LAPTM4A-202ENST00000483117 RNFT1Q5M7Z0 435 aa7.4□□□□□ -1.22
LAPTM4A-202ENST00000483117 CCDC125Q86Z20 511 aa7.4□□□□□ -1.22
LAPTM4A-202ENST00000483117 ZNF592Q92610 1267 aa7.4□□□□□ -1.22
LAPTM4A-202ENST00000483117 OSBPL3Q9H4L5 887 aa7.4□□□□□ -1.22
LAPTM4A-202ENST00000483117 CEP126Q9P2H0 1117 aa7.4□□□□□ -1.22
LAPTM4A-202ENST00000483117 IRF5Q13568 498 aa7.39□□□□□ -1.23
LAPTM4A-202ENST00000483117 SV2AQ7L0J3 742 aa7.39□□□□□ -1.23
LAPTM4A-202ENST00000483117 CCDC85AQ96PX6 553 aaPredicted RBP7.39□□□□□ -1.23
LAPTM4A-202ENST00000483117 CDCA7Q9BWT1 371 aaPredicted RBP7.39□□□□□ -1.23
LAPTM4A-202ENST00000483117 CUEDC1Q9NWM3 386 aaPredicted RBP7.39□□□□□ -1.23
LAPTM4A-202ENST00000483117 ADAMTS8Q9UP79 889 aa7.39□□□□□ -1.23
LAPTM4A-202ENST00000483117 CYP2U1Q7Z449 544 aa7.38□□□□□ -1.23
LAPTM4A-202ENST00000483117 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
LAPTM4A-202ENST00000483117 ARHGEF10LQ9HCE6 1279 aa7.38□□□□□ -1.23
LAPTM4A-202ENST00000483117 RAB6BQ9NRW1 208 aa7.38□□□□□ -1.23
LAPTM4A-202ENST00000483117 TRAK2O60296 914 aa7.37□□□□□ -1.23
LAPTM4A-202ENST00000483117 GPC1P35052 558 aa7.37□□□□□ -1.23
LAPTM4A-202ENST00000483117 NLRP3Q96P20 1036 aa7.37□□□□□ -1.23
LAPTM4A-202ENST00000483117 GDPD2Q9HCC8 539 aa7.37□□□□□ -1.23
LAPTM4A-202ENST00000483117 VAC14Q08AM6 782 aa7.36□□□□□ -1.23
LAPTM4A-202ENST00000483117 POU4F2Q12837 409 aa7.36□□□□□ -1.23
LAPTM4A-202ENST00000483117 CLN3Q13286 438 aa7.36□□□□□ -1.23
LAPTM4A-202ENST00000483117 TSGA10IPQ3SY00 556 aa7.36□□□□□ -1.23
LAPTM4A-202ENST00000483117 SLC27A3Q5K4L6 730 aa7.36□□□□□ -1.23
LAPTM4A-202ENST00000483117 ESF1Q9H501 851 aaKnown RBP7.36□□□□□ -1.23
LAPTM4A-202ENST00000483117 PRM3Q9NNZ6 103 aa7.36□□□□□ -1.23
LAPTM4A-202ENST00000483117 ABL2P42684 1182 aa7.35□□□□□ -1.23
LAPTM4A-202ENST00000483117 EIF4G2P78344 907 aaKnown RBP eCLIP7.35□□□□□ -1.23
LAPTM4A-202ENST00000483117 GRIP2Q9C0E4 1043 aa7.35□□□□□ -1.23
LAPTM4A-202ENST00000483117 WHAMMQ8TF30 809 aa7.34□□□□□ -1.23
LAPTM4A-202ENST00000483117 MYCP01106 439 aaPredicted RBP7.33□□□□□ -1.24
LAPTM4A-202ENST00000483117 IL2RAP01589 272 aa7.33□□□□□ -1.24
LAPTM4A-202ENST00000483117 RIPOR1Q6ZS17 1223 aa7.33□□□□□ -1.24
LAPTM4A-202ENST00000483117 PHTF2Q8N3S3 785 aa7.33□□□□□ -1.24
LAPTM4A-202ENST00000483117 GAS2L1Q99501 681 aaPredicted RBP7.33□□□□□ -1.24
LAPTM4A-202ENST00000483117 GNRH1P01148 92 aa7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 IRS1P35568 1242 aa7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 GAS6Q14393 721 aa7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 MCM6Q14566 821 aa7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 DBN1Q16643 649 aa7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 SLFNL1Q499Z3 407 aa7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 ZNF385CQ66K41 422 aaPredicted RBP7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 NBPF10Q6P3W6 841 aaKnown RBP7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 RNF135Q8IUD6 432 aa7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 NBPF15Q8N660 670 aa7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 CNKSR1Q969H4 720 aa7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 ZNF837Q96EG3 531 aaPredicted RBP7.32□□□□□ -1.24
LAPTM4A-202ENST00000483117 SPATA31C2B4DYI2 1134 aa7.31□□□□□ -1.24
LAPTM4A-202ENST00000483117 GPR25O00155 361 aa7.31□□□□□ -1.24
LAPTM4A-202ENST00000483117 STAU1O95793 577 aaKnown RBP7.31□□□□□ -1.24
LAPTM4A-202ENST00000483117 CENPCQ03188 943 aa7.31□□□□□ -1.24
LAPTM4A-202ENST00000483117 OXLD1Q5BKU9 147 aa7.31□□□□□ -1.24
LAPTM4A-202ENST00000483117 TRIM22Q8IYM9 498 aa7.31□□□□□ -1.24
LAPTM4A-202ENST00000483117 ESYT1Q9BSJ8 1104 aa7.31□□□□□ -1.24
LAPTM4A-202ENST00000483117 DOLKQ9UPQ8 538 aa7.31□□□□□ -1.24
LAPTM4A-202ENST00000483117 DYRK1BQ9Y463 629 aa7.31□□□□□ -1.24
LAPTM4A-202ENST00000483117 SLURP2P0DP57 97 aa7.3□□□□□ -1.24
LAPTM4A-202ENST00000483117 TAS1R3Q7RTX0 852 aa7.3□□□□□ -1.24
LAPTM4A-202ENST00000483117 SVOPQ8N4V2 548 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms