RNA–Protein interactions for RNA: ENST00000483064.1

SNCG-204, Transcript of synuclein gamma, humanhuman

TSL 2

Gene SNCG, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-204ENST00000483064 RAPGEF4Q8WZA2 1011 aa20.28■□□□□ 0.84
SNCG-204ENST00000483064 RTL1A6NKG5 1358 aa20.28■□□□□ 0.84
SNCG-204ENST00000483064 FAM208AQ9UK61 1670 aaKnown RBP20.27■□□□□ 0.84
SNCG-204ENST00000483064 KCNQ4P56696 695 aa20.27■□□□□ 0.84
SNCG-204ENST00000483064 NBPF6Q5VWK0 638 aa20.27■□□□□ 0.84
SNCG-204ENST00000483064 NBPF4Q96M43 638 aa20.27■□□□□ 0.84
SNCG-204ENST00000483064 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.83
SNCG-204ENST00000483064 CGNL1Q0VF96 1302 aa20.27■□□□□ 0.83
SNCG-204ENST00000483064 MAP3K5Q99683 1374 aa20.26■□□□□ 0.83
SNCG-204ENST00000483064 USP47Q96K76 1375 aa20.25■□□□□ 0.83
SNCG-204ENST00000483064 KLHL34Q8N239 644 aa20.25■□□□□ 0.83
SNCG-204ENST00000483064 USHBP1Q8N6Y0 703 aa20.25■□□□□ 0.83
SNCG-204ENST00000483064 CCNL1Q9UK58 526 aaPredicted RBP20.25■□□□□ 0.83
SNCG-204ENST00000483064 PNPLA7Q6ZV29 1317 aa20.25■□□□□ 0.83
SNCG-204ENST00000483064 MEGF6O75095 1541 aa20.24■□□□□ 0.83
SNCG-204ENST00000483064 TATP17735 454 aaPredicted RBP20.24■□□□□ 0.83
SNCG-204ENST00000483064 GPR162Q16538 588 aa20.24■□□□□ 0.83
SNCG-204ENST00000483064 ZNF784Q8NCA9 323 aaPredicted RBP20.24■□□□□ 0.83
SNCG-204ENST00000483064 NSD2O96028 1365 aa20.21■□□□□ 0.83
SNCG-204ENST00000483064 MSH5O43196 834 aa20.21■□□□□ 0.83
SNCG-204ENST00000483064 TRIM26Q12899 539 aaPredicted RBP20.21■□□□□ 0.83
SNCG-204ENST00000483064 HSP90AB2PQ58FF8 381 aa20.21■□□□□ 0.83
SNCG-204ENST00000483064 INSRP06213 1382 aa20.21■□□□□ 0.83
SNCG-204ENST00000483064 HMGB2P26583 209 aaKnown RBP20.2■□□□□ 0.82
SNCG-204ENST00000483064 PELP1Q8IZL8 1130 aaKnown RBP20.19■□□□□ 0.82
SNCG-204ENST00000483064 PCDH11XQ9BZA7 1347 aa20.19■□□□□ 0.82
SNCG-204ENST00000483064 PCDH11YQ9BZA8 1340 aa20.19■□□□□ 0.82
SNCG-204ENST00000483064 FLT4P35916 1363 aa20.19■□□□□ 0.82
SNCG-204ENST00000483064 KIF24Q5T7B8 1368 aa20.18■□□□□ 0.82
SNCG-204ENST00000483064 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
SNCG-204ENST00000483064 CARD14Q9BXL6 1004 aa20.16■□□□□ 0.82
SNCG-204ENST00000483064 UTRNP46939 3433 aa20.15■□□□□ 0.82
SNCG-204ENST00000483064 PPM1GO15355 546 aaPredicted RBP20.15■□□□□ 0.82
SNCG-204ENST00000483064 MPRIPQ6WCQ1 1025 aa20.15■□□□□ 0.82
SNCG-204ENST00000483064 COL23A1Q86Y22 540 aaPredicted RBP20.15■□□□□ 0.82
SNCG-204ENST00000483064 RGPD2P0DJD1 1756 aa20.14■□□□□ 0.81
SNCG-204ENST00000483064 FLAD1Q8NFF5 587 aa20.13■□□□□ 0.81
SNCG-204ENST00000483064 EMILIN1Q9Y6C2 1016 aa20.13■□□□□ 0.81
SNCG-204ENST00000483064 NSD3Q9BZ95 1437 aa20.12■□□□□ 0.81
SNCG-204ENST00000483064 PALLDQ8WX93 1383 aa20.12■□□□□ 0.81
SNCG-204ENST00000483064 CYP27B1O15528 508 aa20.12■□□□□ 0.81
SNCG-204ENST00000483064 NLGN2Q8NFZ4 835 aa20.12■□□□□ 0.81
SNCG-204ENST00000483064 SMARCC1Q92922 1105 aaPredicted RBP20.12■□□□□ 0.81
SNCG-204ENST00000483064 QSER1Q2KHR3 1735 aa20.12■□□□□ 0.81
SNCG-204ENST00000483064 LY75O60449 1722 aa20.11■□□□□ 0.81
SNCG-204ENST00000483064 MSL1Q68DK7 614 aa20.11■□□□□ 0.81
SNCG-204ENST00000483064 TIMELESSQ9UNS1 1208 aa20.11■□□□□ 0.81
SNCG-204ENST00000483064 SHANK3Q9BYB0 1731 aa20.1■□□□□ 0.81
SNCG-204ENST00000483064 SPG7Q9UQ90 795 aa20.1■□□□□ 0.81
SNCG-204ENST00000483064 GRIN3BO60391 1043 aa20.09■□□□□ 0.81
SNCG-204ENST00000483064 AK7Q96M32 723 aa20.08■□□□□ 0.81
SNCG-204ENST00000483064 WASHC2AQ641Q2 1341 aa20.07■□□□□ 0.8
SNCG-204ENST00000483064 C1QTNF8P60827 252 aa20.07■□□□□ 0.8
SNCG-204ENST00000483064 PIGBQ92521 554 aa20.07■□□□□ 0.8
SNCG-204ENST00000483064 NKX1-1Q15270 411 aaPredicted RBP20.06■□□□□ 0.8
SNCG-204ENST00000483064 KIF20BQ96Q89 1820 aa20.06■□□□□ 0.8
SNCG-204ENST00000483064 CHD4Q14839 1912 aa20.06■□□□□ 0.8
SNCG-204ENST00000483064 EYA1Q99502 592 aa20.05■□□□□ 0.8
SNCG-204ENST00000483064 POLR3GLQ9BT43 218 aa20.05■□□□□ 0.8
SNCG-204ENST00000483064 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.05■□□□□ 0.8
SNCG-204ENST00000483064 CD2APQ9Y5K6 639 aa20.05■□□□□ 0.8
SNCG-204ENST00000483064 COL24A1Q17RW2 1714 aa20.05■□□□□ 0.8
SNCG-204ENST00000483064 TUBGCP6Q96RT7 1819 aa20.04■□□□□ 0.8
SNCG-204ENST00000483064 YBX3P16989 372 aaKnown RBP eCLIP20.04■□□□□ 0.82e-8■□□□□ 8.9
SNCG-204ENST00000483064 SENP3-EIF4A1A0A087X0R7 540 aa20.03■□□□□ 0.8
SNCG-204ENST00000483064 GIGYF1O75420 1035 aaPredicted RBP20.03■□□□□ 0.8
SNCG-204ENST00000483064 TMOD3Q9NYL9 352 aa20.03■□□□□ 0.8
SNCG-204ENST00000483064 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
SNCG-204ENST00000483064 PHF14O94880 888 aa20.02■□□□□ 0.8
SNCG-204ENST00000483064 NCAPD2Q15021 1401 aa20.02■□□□□ 0.79
SNCG-204ENST00000483064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.01■□□□□ 0.79
SNCG-204ENST00000483064 LOC102724428A0A0B4J2F2 783 aa20.01■□□□□ 0.79
SNCG-204ENST00000483064 TNNT2P45379 298 aaPredicted RBP20.01■□□□□ 0.79
SNCG-204ENST00000483064 SIK1P57059 783 aa20.01■□□□□ 0.79
SNCG-204ENST00000483064 IFNL2Q8IZJ0 200 aa20.01■□□□□ 0.79
SNCG-204ENST00000483064 PCGF6Q9BYE7 350 aa20■□□□□ 0.79
SNCG-204ENST00000483064 C5P01031 1676 aa20■□□□□ 0.79
SNCG-204ENST00000483064 PHKG2P15735 406 aa19.99■□□□□ 0.79
SNCG-204ENST00000483064 CLSPNQ9HAW4 1339 aa19.99■□□□□ 0.79
SNCG-204ENST00000483064 GOLGB1Q14789 3259 aaKnown RBP19.98■□□□□ 0.79
SNCG-204ENST00000483064 SSFA2P28290 1259 aa19.98■□□□□ 0.79
SNCG-204ENST00000483064 ASAP1Q9ULH1 1129 aa19.98■□□□□ 0.79
SNCG-204ENST00000483064 ATP6V1AP38606 617 aa19.97■□□□□ 0.79
SNCG-204ENST00000483064 EIF4A2Q14240 407 aaKnown RBP19.97■□□□□ 0.79
SNCG-204ENST00000483064 AMIGO3Q86WK7 504 aa19.97■□□□□ 0.79
SNCG-204ENST00000483064 LINC00116Q8NCU8 138 aa19.97■□□□□ 0.79
SNCG-204ENST00000483064 PKD1L3Q7Z443 1732 aa19.96■□□□□ 0.79
SNCG-204ENST00000483064 SMIM5Q71RC9 77 aa19.96■□□□□ 0.79
SNCG-204ENST00000483064 C4BP0C0L5 1744 aa19.96■□□□□ 0.79
SNCG-204ENST00000483064 GNPATO15228 680 aa19.95■□□□□ 0.78
SNCG-204ENST00000483064 TOGARAM1Q9Y4F4 1720 aa19.94■□□□□ 0.78
SNCG-204ENST00000483064 EIF4G2P78344 907 aaKnown RBP eCLIP19.94■□□□□ 0.78
SNCG-204ENST00000483064 ATG3Q9NT62 314 aa19.94■□□□□ 0.78
SNCG-204ENST00000483064 ITPK1Q13572 414 aa19.93■□□□□ 0.78
SNCG-204ENST00000483064 HSP90AB1P08238 724 aaKnown RBP19.92■□□□□ 0.78
SNCG-204ENST00000483064 PANK3Q9H999 370 aa19.92■□□□□ 0.78
SNCG-204ENST00000483064 ITGB4P16144 1822 aa19.92■□□□□ 0.78
SNCG-204ENST00000483064 TAF1LQ8IZX4 1826 aa19.92■□□□□ 0.78
SNCG-204ENST00000483064 ANKRD26Q9UPS8 1709 aa19.91■□□□□ 0.78
SNCG-204ENST00000483064 ERVV-2B6SEH9 535 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms