RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 COG3Q96JB2 828 aa18.12■□□□□ 0.49
ZKSCAN1-204ENST00000482979 PRKRIP1Q9H875 184 aaPredicted RBP18.12■□□□□ 0.49
ZKSCAN1-204ENST00000482979 BTAF1O14981 1849 aa18.12■□□□□ 0.49
ZKSCAN1-204ENST00000482979 RGPD2P0DJD1 1756 aa18.11■□□□□ 0.49
ZKSCAN1-204ENST00000482979 HOXC9P31274 260 aa18.11■□□□□ 0.49
ZKSCAN1-204ENST00000482979 PAPPAQ13219 1627 aa18.11■□□□□ 0.49
ZKSCAN1-204ENST00000482979 PPP1R1BQ9UD71 204 aaPredicted RBP18.1■□□□□ 0.49
ZKSCAN1-204ENST00000482979 ZBTB7AO95365 584 aa18.09■□□□□ 0.49
ZKSCAN1-204ENST00000482979 TNNT2P45379 298 aaPredicted RBP18.09■□□□□ 0.49
ZKSCAN1-204ENST00000482979 SLC15A2Q16348 729 aa18.09■□□□□ 0.49
ZKSCAN1-204ENST00000482979 MIER1Q8N108 512 aa18.09■□□□□ 0.49
ZKSCAN1-204ENST00000482979 STK32BQ9NY57 414 aa18.09■□□□□ 0.49
ZKSCAN1-204ENST00000482979 RALBP1Q15311 655 aa18.08■□□□□ 0.49
ZKSCAN1-204ENST00000482979 SHANK3Q9BYB0 1731 aa18.07■□□□□ 0.48
ZKSCAN1-204ENST00000482979 PTGER2P43116 358 aa18.06■□□□□ 0.48
ZKSCAN1-204ENST00000482979 AMPHP49418 695 aa18.06■□□□□ 0.48
ZKSCAN1-204ENST00000482979 RRS1Q15050 365 aaKnown RBP18.06■□□□□ 0.48
ZKSCAN1-204ENST00000482979 DDX54Q8TDD1 881 aaKnown RBP18.06■□□□□ 0.48
ZKSCAN1-204ENST00000482979 MAP2P11137 1827 aaKnown RBP18.06■□□□□ 0.48
ZKSCAN1-204ENST00000482979 MEGF6O75095 1541 aa18.06■□□□□ 0.48
ZKSCAN1-204ENST00000482979 KAT6BQ8WYB5 2073 aa18.05■□□□□ 0.48
ZKSCAN1-204ENST00000482979 LRRC4BQ9NT99 713 aa18.05■□□□□ 0.48
ZKSCAN1-204ENST00000482979 ATF5Q9Y2D1 282 aaPredicted RBP18.05■□□□□ 0.48
ZKSCAN1-204ENST00000482979 MYBBP1AQ9BQG0 1328 aaKnown RBP18.05■□□□□ 0.48
ZKSCAN1-204ENST00000482979 RTL1A6NKG5 1358 aa18.05■□□□□ 0.48
ZKSCAN1-204ENST00000482979 DOT1LQ8TEK3 1739 aa18.03■□□□□ 0.48
ZKSCAN1-204ENST00000482979 ZNF827Q17R98 1081 aa18.03■□□□□ 0.48
ZKSCAN1-204ENST00000482979 PPP2R1AP30153 589 aa18.02■□□□□ 0.48
ZKSCAN1-204ENST00000482979 NBPF6Q5VWK0 638 aa18.02■□□□□ 0.48
ZKSCAN1-204ENST00000482979 NBPF4Q96M43 638 aa18.02■□□□□ 0.48
ZKSCAN1-204ENST00000482979 USHBP1Q8N6Y0 703 aa18.01■□□□□ 0.47
ZKSCAN1-204ENST00000482979 SGIP1Q9BQI5 828 aa18.01■□□□□ 0.47
ZKSCAN1-204ENST00000482979 MTFR1LQ9H019 292 aa18■□□□□ 0.47
ZKSCAN1-204ENST00000482979 PRIM1P49642 420 aaKnown RBP17.99■□□□□ 0.47
ZKSCAN1-204ENST00000482979 ZCRB1Q8TBF4 217 aaKnown RBP17.99■□□□□ 0.47
ZKSCAN1-204ENST00000482979 HSP90AB2PQ58FF8 381 aa17.98■□□□□ 0.47
ZKSCAN1-204ENST00000482979 AKT1S1Q96B36 256 aa17.98■□□□□ 0.47
ZKSCAN1-204ENST00000482979 KCNQ4P56696 695 aa17.98■□□□□ 0.47
ZKSCAN1-204ENST00000482979 SYTL4Q96C24 671 aaPredicted RBP17.98■□□□□ 0.47
ZKSCAN1-204ENST00000482979 LY75O60449 1722 aa17.97■□□□□ 0.47
ZKSCAN1-204ENST00000482979 INSRP06213 1382 aa17.97■□□□□ 0.47
ZKSCAN1-204ENST00000482979 YY1P25490 414 aa17.97■□□□□ 0.47
ZKSCAN1-204ENST00000482979 FHDC1Q9C0D6 1143 aaPredicted RBP17.97■□□□□ 0.47
ZKSCAN1-204ENST00000482979 EMILIN1Q9Y6C2 1016 aa17.97■□□□□ 0.47
ZKSCAN1-204ENST00000482979 TUBGCP6Q96RT7 1819 aa17.97■□□□□ 0.47
ZKSCAN1-204ENST00000482979 FLT4P35916 1363 aa17.96■□□□□ 0.47
ZKSCAN1-204ENST00000482979 PPM1GO15355 546 aaPredicted RBP17.96■□□□□ 0.47
ZKSCAN1-204ENST00000482979 SLC27A3Q5K4L6 730 aa17.96■□□□□ 0.47
ZKSCAN1-204ENST00000482979 SMG6Q86US8 1419 aaKnown RBP17.96■□□□□ 0.47
ZKSCAN1-204ENST00000482979 QSER1Q2KHR3 1735 aa17.96■□□□□ 0.46
ZKSCAN1-204ENST00000482979 MTHFSP49914 203 aa17.95■□□□□ 0.46
ZKSCAN1-204ENST00000482979 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
ZKSCAN1-204ENST00000482979 SYT17Q9BSW7 474 aa17.95■□□□□ 0.46
ZKSCAN1-204ENST00000482979 MRS2Q9HD23 443 aa17.95■□□□□ 0.46
ZKSCAN1-204ENST00000482979 CCER2I3L3R5 266 aa17.94■□□□□ 0.46
ZKSCAN1-204ENST00000482979 POLKQ9UBT6 870 aa17.94■□□□□ 0.46
ZKSCAN1-204ENST00000482979 KIF24Q5T7B8 1368 aa17.94■□□□□ 0.46
ZKSCAN1-204ENST00000482979 PNPLA7Q6ZV29 1317 aa17.93■□□□□ 0.46
ZKSCAN1-204ENST00000482979 RAPGEF4Q8WZA2 1011 aa17.93■□□□□ 0.46
ZKSCAN1-204ENST00000482979 TATP17735 454 aaPredicted RBP17.92■□□□□ 0.46
ZKSCAN1-204ENST00000482979 COL24A1Q17RW2 1714 aa17.92■□□□□ 0.46
ZKSCAN1-204ENST00000482979 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
ZKSCAN1-204ENST00000482979 CFAP53Q96M91 514 aa17.91■□□□□ 0.46
ZKSCAN1-204ENST00000482979 ARXQ96QS3 562 aa17.91■□□□□ 0.46
ZKSCAN1-204ENST00000482979 TOGARAM1Q9Y4F4 1720 aa17.9■□□□□ 0.46
ZKSCAN1-204ENST00000482979 NCAPD2Q15021 1401 aa17.9■□□□□ 0.46
ZKSCAN1-204ENST00000482979 COL3A1P02461 1466 aaPredicted RBP17.9■□□□□ 0.46
ZKSCAN1-204ENST00000482979 CCNL1Q9UK58 526 aaPredicted RBP17.89■□□□□ 0.46
ZKSCAN1-204ENST00000482979 UTRNP46939 3433 aa17.89■□□□□ 0.45
ZKSCAN1-204ENST00000482979 PKD1L3Q7Z443 1732 aa17.89■□□□□ 0.45
ZKSCAN1-204ENST00000482979 CYP27B1O15528 508 aa17.89■□□□□ 0.45
ZKSCAN1-204ENST00000482979 TFCP2L1Q9NZI6 479 aa17.89■□□□□ 0.45
ZKSCAN1-204ENST00000482979 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
ZKSCAN1-204ENST00000482979 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
ZKSCAN1-204ENST00000482979 MAP3K5Q99683 1374 aa17.88■□□□□ 0.45
ZKSCAN1-204ENST00000482979 SLC16A10Q8TF71 515 aa17.87■□□□□ 0.45
ZKSCAN1-204ENST00000482979 ITGB4P16144 1822 aa17.85■□□□□ 0.45
ZKSCAN1-204ENST00000482979 C5P01031 1676 aa17.85■□□□□ 0.45
ZKSCAN1-204ENST00000482979 TAF1LQ8IZX4 1826 aa17.83■□□□□ 0.45
ZKSCAN1-204ENST00000482979 DIAPH1O60610 1272 aaKnown RBP17.83■□□□□ 0.45
ZKSCAN1-204ENST00000482979 MPRIPQ6WCQ1 1025 aa17.83■□□□□ 0.45
ZKSCAN1-204ENST00000482979 COL23A1Q86Y22 540 aaPredicted RBP17.83■□□□□ 0.45
ZKSCAN1-204ENST00000482979 EYA1Q99502 592 aa17.83■□□□□ 0.45
ZKSCAN1-204ENST00000482979 PALLDQ8WX93 1383 aa17.83■□□□□ 0.44
ZKSCAN1-204ENST00000482979 WDR43Q15061 677 aaKnown RBP eCLIP17.82■□□□□ 0.44
ZKSCAN1-204ENST00000482979 FAM9BQ8IZU0 186 aa17.82■□□□□ 0.44
ZKSCAN1-204ENST00000482979 U2SURPO15042 1029 aaKnown RBP17.81■□□□□ 0.44
ZKSCAN1-204ENST00000482979 POLD1P28340 1107 aa17.81■□□□□ 0.44
ZKSCAN1-204ENST00000482979 EIF4A2Q14240 407 aaKnown RBP17.81■□□□□ 0.44
ZKSCAN1-204ENST00000482979 KLHL34Q8N239 644 aa17.81■□□□□ 0.44
ZKSCAN1-204ENST00000482979 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
ZKSCAN1-204ENST00000482979 PNISRQ8TF01 805 aaKnown RBP17.8■□□□□ 0.44
ZKSCAN1-204ENST00000482979 PIGBQ92521 554 aa17.8■□□□□ 0.44
ZKSCAN1-204ENST00000482979 NUDCQ9Y266 331 aa17.8■□□□□ 0.44
ZKSCAN1-204ENST00000482979 IL13P35225 146 aa17.79■□□□□ 0.44
ZKSCAN1-204ENST00000482979 NLGN2Q8NFZ4 835 aa17.79■□□□□ 0.44
ZKSCAN1-204ENST00000482979 CHD4Q14839 1912 aa17.78■□□□□ 0.44
ZKSCAN1-204ENST00000482979 C4BP0C0L5 1744 aa17.78■□□□□ 0.44
ZKSCAN1-204ENST00000482979 MSH5O43196 834 aa17.78■□□□□ 0.44
ZKSCAN1-204ENST00000482979 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms