RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 TMF1P82094 1093 aa17.93■□□□□ 0.46
COL21A1-209ENST00000482933 CDCA7Q9BWT1 371 aaPredicted RBP17.93■□□□□ 0.46
COL21A1-209ENST00000482933 TNS1Q9HBL0 1735 aaKnown RBP17.92■□□□□ 0.46
COL21A1-209ENST00000482933 DDB1Q16531 1140 aa17.92■□□□□ 0.46
COL21A1-209ENST00000482933 RGPD5Q99666 1765 aa17.92■□□□□ 0.46
COL21A1-209ENST00000482933 CARD10Q9BWT7 1032 aa17.91■□□□□ 0.46
COL21A1-209ENST00000482933 APBA3O96018 575 aa17.9■□□□□ 0.46
COL21A1-209ENST00000482933 CDCA8Q53HL2 280 aa17.9■□□□□ 0.46
COL21A1-209ENST00000482933 CCDC7Q96M83 1385 aa17.9■□□□□ 0.46
COL21A1-209ENST00000482933 PARD3Q8TEW0 1356 aa17.89■□□□□ 0.45
COL21A1-209ENST00000482933 TIE1P35590 1138 aa17.89■□□□□ 0.45
COL21A1-209ENST00000482933 EZH2Q15910 746 aaKnown RBP17.89■□□□□ 0.45
COL21A1-209ENST00000482933 SLC39A7Q92504 469 aa17.89■□□□□ 0.45
COL21A1-209ENST00000482933 OVOS2A0A0G2JMS6 1433 aa17.88■□□□□ 0.45
COL21A1-209ENST00000482933 OVOS2A0A0J9YW53 1432 aa17.88■□□□□ 0.45
COL21A1-209ENST00000482933 OVOS2Q6IE36 1432 aa17.88■□□□□ 0.45
COL21A1-209ENST00000482933 LRRC37A3O60309 1634 aa17.88■□□□□ 0.45
COL21A1-209ENST00000482933 ANKRD36BQ8N2N9 1353 aa17.88■□□□□ 0.45
COL21A1-209ENST00000482933 WNK3Q9BYP7 1800 aa17.88■□□□□ 0.45
COL21A1-209ENST00000482933 KLHL34Q8N239 644 aa17.88■□□□□ 0.45
COL21A1-209ENST00000482933 CAMKK2Q96RR4 588 aa17.88■□□□□ 0.45
COL21A1-209ENST00000482933 LTN1O94822 1766 aa17.87■□□□□ 0.45
COL21A1-209ENST00000482933 PELP1Q8IZL8 1130 aaKnown RBP17.87■□□□□ 0.45
COL21A1-209ENST00000482933 COG3Q96JB2 828 aa17.87■□□□□ 0.45
COL21A1-209ENST00000482933 PCDHB13Q9Y5F0 798 aa17.86■□□□□ 0.45
COL21A1-209ENST00000482933 ERBB3P21860 1342 aa17.86■□□□□ 0.45
COL21A1-209ENST00000482933 EXOC5O00471 708 aa17.85■□□□□ 0.45
COL21A1-209ENST00000482933 C7P10643 843 aa17.85■□□□□ 0.45
COL21A1-209ENST00000482933 PSDA5PKW4 1024 aaPredicted RBP17.83■□□□□ 0.45
COL21A1-209ENST00000482933 ANKRD24Q8TF21 1146 aa17.83■□□□□ 0.45
COL21A1-209ENST00000482933 NLRP2Q9NX02 1062 aa17.83■□□□□ 0.45
COL21A1-209ENST00000482933 METRNQ9UJH8 293 aa17.83■□□□□ 0.45
COL21A1-209ENST00000482933 PEAK1Q9H792 1746 aa17.83■□□□□ 0.44
COL21A1-209ENST00000482933 DCAF8Q5TAQ9 597 aa17.82■□□□□ 0.44
COL21A1-209ENST00000482933 IP6K1Q92551 441 aa17.82■□□□□ 0.44
COL21A1-209ENST00000482933 BMP2KQ9NSY1 1161 aaPredicted RBP17.82■□□□□ 0.44
COL21A1-209ENST00000482933 BCL9O00512 1426 aa17.82■□□□□ 0.44
COL21A1-209ENST00000482933 MARCH10Q8NA82 808 aaPredicted RBP17.81■□□□□ 0.44
COL21A1-209ENST00000482933 ATN1P54259 1190 aaPredicted RBP17.81■□□□□ 0.44
COL21A1-209ENST00000482933 NBPF14Q5TI25 921 aa17.81■□□□□ 0.44
COL21A1-209ENST00000482933 CCER1Q8TC90 406 aaPredicted RBP17.81■□□□□ 0.44
COL21A1-209ENST00000482933 SBF2Q86WG5 1849 aa17.8■□□□□ 0.44
COL21A1-209ENST00000482933 SRCAPQ6ZRS2 3230 aa17.8■□□□□ 0.44
COL21A1-209ENST00000482933 IL2RBP14784 551 aa17.8■□□□□ 0.44
COL21A1-209ENST00000482933 R3HDM1Q15032 1099 aaKnown RBP17.8■□□□□ 0.44
COL21A1-209ENST00000482933 BCL11BQ9C0K0 894 aaPredicted RBP17.8■□□□□ 0.44
COL21A1-209ENST00000482933 RREB1Q92766 1687 aa17.79■□□□□ 0.44
COL21A1-209ENST00000482933 TNS2Q63HR2 1409 aa17.79■□□□□ 0.44
COL21A1-209ENST00000482933 PLSCR1O15162 318 aa17.79■□□□□ 0.44
COL21A1-209ENST00000482933 AMPHP49418 695 aa17.79■□□□□ 0.44
COL21A1-209ENST00000482933 FYB1O15117 783 aa17.78■□□□□ 0.44
COL21A1-209ENST00000482933 TRPC6Q9Y210 931 aa17.78■□□□□ 0.44
COL21A1-209ENST00000482933 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.44
COL21A1-209ENST00000482933 HOXC9P31274 260 aa17.77■□□□□ 0.44
COL21A1-209ENST00000482933 GGNBP2Q9H3C7 697 aa17.77■□□□□ 0.44
COL21A1-209ENST00000482933 LRP5O75197 1615 aa17.77■□□□□ 0.43
COL21A1-209ENST00000482933 FAM208AQ9UK61 1670 aaKnown RBP17.76■□□□□ 0.43
COL21A1-209ENST00000482933 GSE1Q14687 1217 aa17.76■□□□□ 0.43
COL21A1-209ENST00000482933 LTV1Q96GA3 475 aaPredicted RBP17.76■□□□□ 0.43
COL21A1-209ENST00000482933 RGPD3A6NKT7 1758 aaPredicted RBP17.76■□□□□ 0.43
COL21A1-209ENST00000482933 RGPD4Q7Z3J3 1758 aa17.76■□□□□ 0.43
COL21A1-209ENST00000482933 NUP188Q5SRE5 1749 aa17.76■□□□□ 0.43
COL21A1-209ENST00000482933 RTL1A6NKG5 1358 aa17.75■□□□□ 0.43
COL21A1-209ENST00000482933 KIF20BQ96Q89 1820 aa17.73■□□□□ 0.43
COL21A1-209ENST00000482933 FBLN1P23142 703 aa17.73■□□□□ 0.43
COL21A1-209ENST00000482933 TTLL13PA6NNM8 815 aa17.72■□□□□ 0.43
COL21A1-209ENST00000482933 EIF4G2P78344 907 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL21A1-209ENST00000482933 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
COL21A1-209ENST00000482933 IFNL1Q8IU54 200 aa17.72■□□□□ 0.43
COL21A1-209ENST00000482933 MYOM1P52179 1685 aa17.72■□□□□ 0.43
COL21A1-209ENST00000482933 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
COL21A1-209ENST00000482933 NSD3Q9BZ95 1437 aa17.71■□□□□ 0.43
COL21A1-209ENST00000482933 CARD14Q9BXL6 1004 aa17.71■□□□□ 0.43
COL21A1-209ENST00000482933 SMG6Q86US8 1419 aaKnown RBP17.7■□□□□ 0.42
COL21A1-209ENST00000482933 KIF24Q5T7B8 1368 aa17.7■□□□□ 0.42
COL21A1-209ENST00000482933 ACSBG1Q96GR2 724 aa17.69■□□□□ 0.42
COL21A1-209ENST00000482933 POLR3GLQ9BT43 218 aa17.69■□□□□ 0.42
COL21A1-209ENST00000482933 NHSQ6T4R5 1651 aa17.68■□□□□ 0.42
COL21A1-209ENST00000482933 POTEB2H3BUK9 544 aa17.68■□□□□ 0.42
COL21A1-209ENST00000482933 KCNQ2O43526 872 aa17.68■□□□□ 0.42
COL21A1-209ENST00000482933 FLT4P35916 1363 aa17.67■□□□□ 0.42
COL21A1-209ENST00000482933 HSPA5P11021 654 aaKnown RBP17.67■□□□□ 0.42
COL21A1-209ENST00000482933 PYGBP11216 843 aa17.67■□□□□ 0.42
COL21A1-209ENST00000482933 TXNRD1Q16881 649 aa17.67■□□□□ 0.42
COL21A1-209ENST00000482933 CGNL1Q0VF96 1302 aa17.67■□□□□ 0.42
COL21A1-209ENST00000482933 INSRP06213 1382 aa17.66■□□□□ 0.42
COL21A1-209ENST00000482933 DDX54Q8TDD1 881 aaKnown RBP17.66■□□□□ 0.42
COL21A1-209ENST00000482933 RGPD2P0DJD1 1756 aa17.65■□□□□ 0.42
COL21A1-209ENST00000482933 NBPF6Q5VWK0 638 aa17.65■□□□□ 0.42
COL21A1-209ENST00000482933 NBPF4Q96M43 638 aa17.65■□□□□ 0.42
COL21A1-209ENST00000482933 HSP90AB2PQ58FF8 381 aa17.64■□□□□ 0.42
COL21A1-209ENST00000482933 ZCRB1Q8TBF4 217 aaKnown RBP17.64■□□□□ 0.42
COL21A1-209ENST00000482933 SPOCK2Q92563 424 aa17.64■□□□□ 0.42
COL21A1-209ENST00000482933 KAT6BQ8WYB5 2073 aa17.64■□□□□ 0.41
COL21A1-209ENST00000482933 IFNLR1Q8IU57 520 aaPredicted RBP17.64■□□□□ 0.41
COL21A1-209ENST00000482933 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.41
COL21A1-209ENST00000482933 IER5LQ5T953 404 aa17.63■□□□□ 0.41
COL21A1-209ENST00000482933 SPON1Q9HCB6 807 aa17.63■□□□□ 0.41
COL21A1-209ENST00000482933 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
COL21A1-209ENST00000482933 STK32BQ9NY57 414 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms