RNA–Protein interactions for RNA: ENST00000482916.1

SHISA9-202, Transcript of shisa family member 9, humanhuman

TSL 4

Gene SHISA9, Length 556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-202ENST00000482916 DOT1LQ8TEK3 1739 aa18.37■□□□□ 0.53
SHISA9-202ENST00000482916 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
SHISA9-202ENST00000482916 ZCRB1Q8TBF4 217 aaKnown RBP18.36■□□□□ 0.53
SHISA9-202ENST00000482916 USHBP1Q8N6Y0 703 aa18.35■□□□□ 0.53
SHISA9-202ENST00000482916 RAPGEF4Q8WZA2 1011 aa18.35■□□□□ 0.53
SHISA9-202ENST00000482916 CASZ1Q86V15 1759 aa18.34■□□□□ 0.53
SHISA9-202ENST00000482916 PPM1GO15355 546 aaPredicted RBP18.33■□□□□ 0.52
SHISA9-202ENST00000482916 TATP17735 454 aaPredicted RBP18.33■□□□□ 0.52
SHISA9-202ENST00000482916 STK32BQ9NY57 414 aa18.33■□□□□ 0.52
SHISA9-202ENST00000482916 PAPPAQ13219 1627 aa18.32■□□□□ 0.52
SHISA9-202ENST00000482916 PANK3Q9H999 370 aa18.31■□□□□ 0.52
SHISA9-202ENST00000482916 SPON1Q9HCB6 807 aa18.31■□□□□ 0.52
SHISA9-202ENST00000482916 NSD2O96028 1365 aa18.3■□□□□ 0.52
SHISA9-202ENST00000482916 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
SHISA9-202ENST00000482916 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
SHISA9-202ENST00000482916 NCAPD2Q15021 1401 aa18.3■□□□□ 0.52
SHISA9-202ENST00000482916 PKD1L3Q7Z443 1732 aa18.29■□□□□ 0.52
SHISA9-202ENST00000482916 PCDH11XQ9BZA7 1347 aa18.29■□□□□ 0.52
SHISA9-202ENST00000482916 PCDH11YQ9BZA8 1340 aa18.29■□□□□ 0.52
SHISA9-202ENST00000482916 SLC15A2Q16348 729 aa18.29■□□□□ 0.52
SHISA9-202ENST00000482916 POLKQ9UBT6 870 aa18.29■□□□□ 0.52
SHISA9-202ENST00000482916 PRIM1P49642 420 aaKnown RBP18.28■□□□□ 0.52
SHISA9-202ENST00000482916 TNNT2P45379 298 aaPredicted RBP18.27■□□□□ 0.52
SHISA9-202ENST00000482916 SLC27A3Q5K4L6 730 aa18.27■□□□□ 0.52
SHISA9-202ENST00000482916 LY75O60449 1722 aa18.26■□□□□ 0.51
SHISA9-202ENST00000482916 PPP1R1BQ9UD71 204 aaPredicted RBP18.26■□□□□ 0.51
SHISA9-202ENST00000482916 PDGFDQ9GZP0 370 aaPredicted RBP18.25■□□□□ 0.51
SHISA9-202ENST00000482916 LRRC4BQ9NT99 713 aa18.25■□□□□ 0.51
SHISA9-202ENST00000482916 KNSTRNQ9Y448 316 aa18.24■□□□□ 0.51
SHISA9-202ENST00000482916 KIF7Q2M1P5 1343 aa18.23■□□□□ 0.51
SHISA9-202ENST00000482916 EYA1Q99502 592 aa18.23■□□□□ 0.51
SHISA9-202ENST00000482916 QSER1Q2KHR3 1735 aa18.23■□□□□ 0.51
SHISA9-202ENST00000482916 TOGARAM1Q9Y4F4 1720 aa18.23■□□□□ 0.51
SHISA9-202ENST00000482916 CYP27B1O15528 508 aa18.22■□□□□ 0.51
SHISA9-202ENST00000482916 ZBTB7AO95365 584 aa18.22■□□□□ 0.51
SHISA9-202ENST00000482916 EIF4A2Q14240 407 aaKnown RBP18.22■□□□□ 0.51
SHISA9-202ENST00000482916 MORC1Q86VD1 984 aa18.22■□□□□ 0.51
SHISA9-202ENST00000482916 ZNF827Q17R98 1081 aa18.21■□□□□ 0.51
SHISA9-202ENST00000482916 SPG7Q9UQ90 795 aa18.21■□□□□ 0.51
SHISA9-202ENST00000482916 ITGB4P16144 1822 aa18.21■□□□□ 0.51
SHISA9-202ENST00000482916 PLEKHG2Q9H7P9 1386 aa18.2■□□□□ 0.5
SHISA9-202ENST00000482916 MTFR1LQ9H019 292 aa18.2■□□□□ 0.5
SHISA9-202ENST00000482916 TUBGCP6Q96RT7 1819 aa18.19■□□□□ 0.5
SHISA9-202ENST00000482916 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
SHISA9-202ENST00000482916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.19■□□□□ 0.5
SHISA9-202ENST00000482916 CCNL1Q9UK58 526 aaPredicted RBP18.19■□□□□ 0.5
SHISA9-202ENST00000482916 IGSF1Q8N6C5 1336 aa18.19■□□□□ 0.5
SHISA9-202ENST00000482916 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
SHISA9-202ENST00000482916 PTGER2P43116 358 aa18.17■□□□□ 0.5
SHISA9-202ENST00000482916 C5P01031 1676 aa18.16■□□□□ 0.5
SHISA9-202ENST00000482916 KCNQ4P56696 695 aa18.16■□□□□ 0.5
SHISA9-202ENST00000482916 NKX1-1Q15270 411 aaPredicted RBP18.16■□□□□ 0.5
SHISA9-202ENST00000482916 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
SHISA9-202ENST00000482916 MPRIPQ6WCQ1 1025 aa18.16■□□□□ 0.5
SHISA9-202ENST00000482916 PALLDQ8WX93 1383 aa18.16■□□□□ 0.5
SHISA9-202ENST00000482916 IFNL2Q8IZJ0 200 aa18.14■□□□□ 0.49
SHISA9-202ENST00000482916 TFCP2L1Q9NZI6 479 aa18.14■□□□□ 0.49
SHISA9-202ENST00000482916 PNPLA7Q6ZV29 1317 aa18.14■□□□□ 0.49
SHISA9-202ENST00000482916 TAF1LQ8IZX4 1826 aa18.14■□□□□ 0.49
SHISA9-202ENST00000482916 PHKG2P15735 406 aa18.13■□□□□ 0.49
SHISA9-202ENST00000482916 HMGB2P26583 209 aaKnown RBP18.13■□□□□ 0.49
SHISA9-202ENST00000482916 SLC16A10Q8TF71 515 aa18.13■□□□□ 0.49
SHISA9-202ENST00000482916 SMARCC1Q92922 1105 aaPredicted RBP18.13■□□□□ 0.49
SHISA9-202ENST00000482916 SGIP1Q9BQI5 828 aa18.13■□□□□ 0.49
SHISA9-202ENST00000482916 PIGBQ92521 554 aa18.11■□□□□ 0.49
SHISA9-202ENST00000482916 COL24A1Q17RW2 1714 aa18.1■□□□□ 0.49
SHISA9-202ENST00000482916 DCAF8L1A6NGE4 600 aa18.1■□□□□ 0.49
SHISA9-202ENST00000482916 PER1O15534 1290 aaPredicted RBP18.1■□□□□ 0.49
SHISA9-202ENST00000482916 TMOD3Q9NYL9 352 aa18.1■□□□□ 0.49
SHISA9-202ENST00000482916 PLEKHO1Q53GL0 409 aaPredicted RBP18.09■□□□□ 0.49
SHISA9-202ENST00000482916 ARXQ96QS3 562 aa18.09■□□□□ 0.49
SHISA9-202ENST00000482916 C4BP0C0L5 1744 aa18.09■□□□□ 0.49
SHISA9-202ENST00000482916 KDRP35968 1356 aa18.08■□□□□ 0.49
SHISA9-202ENST00000482916 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.48
SHISA9-202ENST00000482916 AMOTQ4VCS5 1084 aa18.08■□□□□ 0.48
SHISA9-202ENST00000482916 FHDC1Q9C0D6 1143 aaPredicted RBP18.08■□□□□ 0.48
SHISA9-202ENST00000482916 NPC1L1Q9UHC9 1359 aa18.07■□□□□ 0.48
SHISA9-202ENST00000482916 POLD1P28340 1107 aa18.07■□□□□ 0.48
SHISA9-202ENST00000482916 IL13P35225 146 aa18.07■□□□□ 0.48
SHISA9-202ENST00000482916 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
SHISA9-202ENST00000482916 AEBP1Q8IUX7 1158 aa18.07■□□□□ 0.48
SHISA9-202ENST00000482916 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
SHISA9-202ENST00000482916 ZNF530Q6P9A1 599 aaPredicted RBP18.06■□□□□ 0.48
SHISA9-202ENST00000482916 SYT17Q9BSW7 474 aa18.06■□□□□ 0.48
SHISA9-202ENST00000482916 MAP3K5Q99683 1374 aa18.05■□□□□ 0.48
SHISA9-202ENST00000482916 MSH5O43196 834 aa18.05■□□□□ 0.48
SHISA9-202ENST00000482916 MTHFSP49914 203 aa18.05■□□□□ 0.48
SHISA9-202ENST00000482916 DCAF5Q96JK2 942 aa18.05■□□□□ 0.48
SHISA9-202ENST00000482916 UTRNP46939 3433 aa18.04■□□□□ 0.48
SHISA9-202ENST00000482916 UBR3Q6ZT12 1888 aa18.04■□□□□ 0.48
SHISA9-202ENST00000482916 LOC102724428A0A0B4J2F2 783 aa18.04■□□□□ 0.48
SHISA9-202ENST00000482916 ERVV-2B6SEH9 535 aa18.04■□□□□ 0.48
SHISA9-202ENST00000482916 SIK1P57059 783 aa18.04■□□□□ 0.48
SHISA9-202ENST00000482916 C1orf141Q5JVX7 400 aa18.04■□□□□ 0.48
SHISA9-202ENST00000482916 COL23A1Q86Y22 540 aaPredicted RBP18.04■□□□□ 0.48
SHISA9-202ENST00000482916 FLAD1Q8NFF5 587 aa18.04■□□□□ 0.48
SHISA9-202ENST00000482916 AK7Q96M32 723 aa18.04■□□□□ 0.48
SHISA9-202ENST00000482916 ASAP1Q9ULH1 1129 aa18.04■□□□□ 0.48
SHISA9-202ENST00000482916 KDM6AO15550 1401 aaPredicted RBP18.04■□□□□ 0.48
SHISA9-202ENST00000482916 ATG3Q9NT62 314 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms