RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 ZNF428Q96B54 188 aa13.48□□□□□ -0.25
RPGR-208ENST00000482855 BRPF1P55201 1214 aaPredicted RBP13.48□□□□□ -0.25
RPGR-208ENST00000482855 SIRT2Q8IXJ6 389 aa13.48□□□□□ -0.25
RPGR-208ENST00000482855 THEMISQ8N1K5 641 aaPredicted RBP13.48□□□□□ -0.25
RPGR-208ENST00000482855 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
RPGR-208ENST00000482855 CBX1P83916 185 aa13.47□□□□□ -0.25
RPGR-208ENST00000482855 PLEKHM2Q8IWE5 1019 aa13.47□□□□□ -0.25
RPGR-208ENST00000482855 ZNF710Q8N1W2 664 aa13.47□□□□□ -0.25
RPGR-208ENST00000482855 SYAP1Q96A49 352 aaPredicted RBP13.47□□□□□ -0.25
RPGR-208ENST00000482855 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
RPGR-208ENST00000482855 ZFYVE9O95405 1425 aa13.47□□□□□ -0.25
RPGR-208ENST00000482855 GTF2F1P35269 517 aaKnown RBP eCLIP13.47□□□□□ -0.25
RPGR-208ENST00000482855 TTC22Q5TAA0 569 aa13.47□□□□□ -0.25
RPGR-208ENST00000482855 PIBF1Q8WXW3 757 aa13.47□□□□□ -0.25
RPGR-208ENST00000482855 CHAMP1Q96JM3 812 aa13.47□□□□□ -0.25
RPGR-208ENST00000482855 PIK3R4Q99570 1358 aa13.46□□□□□ -0.25
RPGR-208ENST00000482855 CEBPAP49715 358 aaPredicted RBP13.46□□□□□ -0.25
RPGR-208ENST00000482855 CASC1Q6TDU7 716 aa13.46□□□□□ -0.25
RPGR-208ENST00000482855 TSC1Q92574 1164 aa13.46□□□□□ -0.25
RPGR-208ENST00000482855 KIF20AO95235 890 aa13.46□□□□□ -0.25
RPGR-208ENST00000482855 FOXD4L5Q5VV16 416 aaPredicted RBP13.46□□□□□ -0.25
RPGR-208ENST00000482855 FOXD4L4Q8WXT5 416 aaPredicted RBP13.46□□□□□ -0.25
RPGR-208ENST00000482855 ARHGAP45Q92619 1136 aa13.46□□□□□ -0.25
RPGR-208ENST00000482855 JARID2Q92833 1246 aaPredicted RBP13.46□□□□□ -0.25
RPGR-208ENST00000482855 PTCH1Q13635 1447 aa13.46□□□□□ -0.26
RPGR-208ENST00000482855 NOLC1Q14978 699 aaKnown RBP eCLIP13.45□□□□□ -0.26
RPGR-208ENST00000482855 PPP4R3BQ5MIZ7 849 aa13.45□□□□□ -0.26
RPGR-208ENST00000482855 KIF3AQ9Y496 699 aa13.45□□□□□ -0.26
RPGR-208ENST00000482855 COL3A1P02461 1466 aaPredicted RBP13.44□□□□□ -0.26
RPGR-208ENST00000482855 NPHP4O75161 1426 aaPredicted RBP13.44□□□□□ -0.26
RPGR-208ENST00000482855 PHF14O94880 888 aa13.44□□□□□ -0.26
RPGR-208ENST00000482855 LETM1O95202 739 aaPredicted RBP13.44□□□□□ -0.26
RPGR-208ENST00000482855 FGD1P98174 961 aa13.44□□□□□ -0.26
RPGR-208ENST00000482855 MRPL50Q8N5N7 158 aaKnown RBP13.44□□□□□ -0.26
RPGR-208ENST00000482855 CHD2O14647 1828 aaKnown RBP13.44□□□□□ -0.26
RPGR-208ENST00000482855 TMEM2Q9UHN6 1383 aa13.43□□□□□ -0.26
RPGR-208ENST00000482855 PPLO60437 1756 aa13.43□□□□□ -0.26
RPGR-208ENST00000482855 REC8O95072 547 aa13.43□□□□□ -0.26
RPGR-208ENST00000482855 FAM184AQ8NB25 1140 aa13.43□□□□□ -0.26
RPGR-208ENST00000482855 ABCC4O15439 1325 aa13.42□□□□□ -0.26
RPGR-208ENST00000482855 EVC2Q86UK5 1308 aa13.42□□□□□ -0.26
RPGR-208ENST00000482855 ATP2B3Q16720 1220 aa13.42□□□□□ -0.26
RPGR-208ENST00000482855 ZNF830Q96NB3 372 aaPredicted RBP13.42□□□□□ -0.26
RPGR-208ENST00000482855 UVSSAQ2YD98 709 aa13.42□□□□□ -0.26
RPGR-208ENST00000482855 MPNDQ8N594 471 aa13.42□□□□□ -0.26
RPGR-208ENST00000482855 CFAP65Q6ZU64 1925 aaKnown RBP13.42□□□□□ -0.26
RPGR-208ENST00000482855 DCTPP1Q9H773 170 aa13.41□□□□□ -0.26
RPGR-208ENST00000482855 VAMP4O75379 141 aa13.41□□□□□ -0.26
RPGR-208ENST00000482855 BRD1O95696 1058 aa13.41□□□□□ -0.26
RPGR-208ENST00000482855 FKBP5Q13451 457 aaPredicted RBP13.41□□□□□ -0.26
RPGR-208ENST00000482855 PUS7Q96PZ0 661 aaKnown RBP13.41□□□□□ -0.26
RPGR-208ENST00000482855 SETD1AO15047 1707 aaKnown RBP13.41□□□□□ -0.26
RPGR-208ENST00000482855 STRCP1A6NGW2 1772 aa13.41□□□□□ -0.26
RPGR-208ENST00000482855 PDCL2Q8N4E4 241 aa13.4□□□□□ -0.26
RPGR-208ENST00000482855 BCL2L12Q9HB09 334 aa13.4□□□□□ -0.26
RPGR-208ENST00000482855 PLEKHG1Q9ULL1 1385 aa13.4□□□□□ -0.26
RPGR-208ENST00000482855 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
RPGR-208ENST00000482855 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
RPGR-208ENST00000482855 SDSP20132 328 aa13.4□□□□□ -0.26
RPGR-208ENST00000482855 TMEM132EQ6IEE7 984 aa13.4□□□□□ -0.26
RPGR-208ENST00000482855 C16orf71Q8IYS4 520 aaPredicted RBP13.4□□□□□ -0.26
RPGR-208ENST00000482855 TTC12Q9H892 705 aaPredicted RBP13.4□□□□□ -0.26
RPGR-208ENST00000482855 C14orf93Q9H972 538 aaKnown RBP13.4□□□□□ -0.26
RPGR-208ENST00000482855 USP25Q9UHP3 1055 aa13.4□□□□□ -0.26
RPGR-208ENST00000482855 ADGRB1O14514 1584 aa13.4□□□□□ -0.26
RPGR-208ENST00000482855 FAM177BA6PVY3 158 aa13.4□□□□□ -0.27
RPGR-208ENST00000482855 TMX3Q96JJ7 454 aa13.4□□□□□ -0.27
RPGR-208ENST00000482855 GGNBP2Q9H3C7 697 aa13.4□□□□□ -0.27
RPGR-208ENST00000482855 SPTLC3Q9NUV7 552 aa13.4□□□□□ -0.27
RPGR-208ENST00000482855 XIRP1Q702N8 1843 aaKnown RBP13.39□□□□□ -0.27
RPGR-208ENST00000482855 C17orf53Q8N3J3 647 aaPredicted RBP13.39□□□□□ -0.27
RPGR-208ENST00000482855 NRXN3Q9Y4C0 1643 aa13.39□□□□□ -0.27
RPGR-208ENST00000482855 NEXMIFQ5QGS0 1516 aa13.39□□□□□ -0.27
RPGR-208ENST00000482855 KNDC1Q76NI1 1749 aa13.39□□□□□ -0.27
RPGR-208ENST00000482855 ADCY5O95622 1261 aa13.39□□□□□ -0.27
RPGR-208ENST00000482855 API5Q9BZZ5 524 aaKnown RBP13.39□□□□□ -0.27
RPGR-208ENST00000482855 TULP4Q9NRJ4 1543 aa13.38□□□□□ -0.27
RPGR-208ENST00000482855 ERC2O15083 957 aa13.38□□□□□ -0.27
RPGR-208ENST00000482855 MCM2P49736 904 aa13.38□□□□□ -0.27
RPGR-208ENST00000482855 NEK4P51957 841 aa13.38□□□□□ -0.27
RPGR-208ENST00000482855 CHAF1AQ13111 956 aaPredicted RBP13.38□□□□□ -0.27
RPGR-208ENST00000482855 FBXO31Q5XUX0 539 aaPredicted RBP13.38□□□□□ -0.27
RPGR-208ENST00000482855 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
RPGR-208ENST00000482855 XRN1Q8IZH2 1706 aaKnown RBP13.38□□□□□ -0.27
RPGR-208ENST00000482855 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
RPGR-208ENST00000482855 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
RPGR-208ENST00000482855 OTUD7AQ8TE49 926 aaPredicted RBP13.37□□□□□ -0.27
RPGR-208ENST00000482855 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
RPGR-208ENST00000482855 DIAPH3Q9NSV4 1193 aa13.37□□□□□ -0.27
RPGR-208ENST00000482855 LRRC7Q96NW7 1537 aa13.37□□□□□ -0.27
RPGR-208ENST00000482855 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
RPGR-208ENST00000482855 A0A1W2PP64 1363 aa13.37□□□□□ -0.27
RPGR-208ENST00000482855 ANKRD26Q9UPS8 1709 aa13.37□□□□□ -0.27
RPGR-208ENST00000482855 FCHSD2O94868 740 aa13.36□□□□□ -0.27
RPGR-208ENST00000482855 GADD45BO75293 160 aaPredicted RBP13.35□□□□□ -0.27
RPGR-208ENST00000482855 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
RPGR-208ENST00000482855 GNAI1P63096 354 aa13.35□□□□□ -0.27
RPGR-208ENST00000482855 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.35□□□□□ -0.27
RPGR-208ENST00000482855 KIF24Q5T7B8 1368 aa13.35□□□□□ -0.27
RPGR-208ENST00000482855 ATAD2Q6PL18 1390 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms