RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 SLIT2O94813 1529 aa10.63□□□□□ -0.71
TVP23B-203ENST00000482741 RYDENQ9NUL5 291 aaKnown RBP10.63□□□□□ -0.71
TVP23B-203ENST00000482741 EIF4G2P78344 907 aaKnown RBP eCLIP10.62□□□□□ -0.71
TVP23B-203ENST00000482741 SOS2Q07890 1332 aaPredicted RBP10.62□□□□□ -0.71
TVP23B-203ENST00000482741 DUOX1Q9NRD9 1551 aa10.62□□□□□ -0.71
TVP23B-203ENST00000482741 A6NJR5 290 aa10.62□□□□□ -0.71
TVP23B-203ENST00000482741 SERPINA10Q9UK55 444 aa10.62□□□□□ -0.71
TVP23B-203ENST00000482741 RGS12O14924 1447 aa10.62□□□□□ -0.71
TVP23B-203ENST00000482741 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
TVP23B-203ENST00000482741 SIN3AQ96ST3 1273 aa10.61□□□□□ -0.71
TVP23B-203ENST00000482741 ZNF330Q9Y3S2 320 aaPredicted RBP10.61□□□□□ -0.71
TVP23B-203ENST00000482741 NRXN2Q9P2S2 1712 aa10.61□□□□□ -0.71
TVP23B-203ENST00000482741 PLEKHH1Q9ULM0 1364 aa10.61□□□□□ -0.71
TVP23B-203ENST00000482741 FECHP22830 423 aa10.6□□□□□ -0.71
TVP23B-203ENST00000482741 TUBGCP6Q96RT7 1819 aa10.6□□□□□ -0.71
TVP23B-203ENST00000482741 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
TVP23B-203ENST00000482741 MFRPQ9BY79 579 aa10.6□□□□□ -0.71
TVP23B-203ENST00000482741 POLR3EQ9NVU0 708 aa10.6□□□□□ -0.71
TVP23B-203ENST00000482741 A0A1W2PP64 1363 aa10.6□□□□□ -0.71
TVP23B-203ENST00000482741 C4AP0C0L4 1744 aa10.6□□□□□ -0.71
TVP23B-203ENST00000482741 C4BP0C0L5 1744 aa10.6□□□□□ -0.71
TVP23B-203ENST00000482741 PLSCR2Q9NRY7 297 aa10.6□□□□□ -0.71
TVP23B-203ENST00000482741 EID1Q9Y6B2 187 aa10.6□□□□□ -0.71
TVP23B-203ENST00000482741 SMYD5Q6GMV2 418 aa10.59□□□□□ -0.71
TVP23B-203ENST00000482741 GGT6Q6P531 493 aa10.59□□□□□ -0.71
TVP23B-203ENST00000482741 CERS3Q8IU89 383 aa10.59□□□□□ -0.71
TVP23B-203ENST00000482741 DDRGK1Q96HY6 314 aa10.59□□□□□ -0.71
TVP23B-203ENST00000482741 LRP5O75197 1615 aa10.59□□□□□ -0.71
TVP23B-203ENST00000482741 RASEFQ8IZ41 740 aa10.59□□□□□ -0.71
TVP23B-203ENST00000482741 KIF13BQ9NQT8 1826 aa10.59□□□□□ -0.71
TVP23B-203ENST00000482741 SCN7AQ01118 1682 aa10.59□□□□□ -0.71
TVP23B-203ENST00000482741 TMED8Q6PL24 325 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-203ENST00000482741 ARHGEF10O15013 1369 aa10.58□□□□□ -0.72
TVP23B-203ENST00000482741 A0A1B0GUL6 1792 aa10.58□□□□□ -0.72
TVP23B-203ENST00000482741 WASLO00401 505 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-203ENST00000482741 NCKAP5LQ9HCH0 1330 aa10.58□□□□□ -0.72
TVP23B-203ENST00000482741 DLEC1Q9Y238 1755 aa10.57□□□□□ -0.72
TVP23B-203ENST00000482741 DDX60Q8IY21 1712 aaKnown RBP10.57□□□□□ -0.72
TVP23B-203ENST00000482741 HSPA5P11021 654 aaKnown RBP10.57□□□□□ -0.72
TVP23B-203ENST00000482741 TRIM52Q96A61 297 aa10.57□□□□□ -0.72
TVP23B-203ENST00000482741 KIAA1551Q9HCM1 1747 aa10.56□□□□□ -0.72
TVP23B-203ENST00000482741 CGNL1Q0VF96 1302 aa10.56□□□□□ -0.72
TVP23B-203ENST00000482741 POM121CA8CG34 1229 aa10.56□□□□□ -0.72
TVP23B-203ENST00000482741 RALBP1Q15311 655 aa10.56□□□□□ -0.72
TVP23B-203ENST00000482741 PROCA1Q8NCQ7 364 aaPredicted RBP10.56□□□□□ -0.72
TVP23B-203ENST00000482741 FAM212AQ96EL1 285 aa10.56□□□□□ -0.72
TVP23B-203ENST00000482741 PRR36Q9H6K5 1346 aa10.56□□□□□ -0.72
TVP23B-203ENST00000482741 MS4A1P11836 297 aa10.55□□□□□ -0.72
TVP23B-203ENST00000482741 FNBP4Q8N3X1 1017 aaPredicted RBP10.55□□□□□ -0.72
TVP23B-203ENST00000482741 GDPD2Q9HCC8 539 aa10.55□□□□□ -0.72
TVP23B-203ENST00000482741 TMF1P82094 1093 aa10.55□□□□□ -0.72
TVP23B-203ENST00000482741 NLRP7Q8WX94 980 aa10.55□□□□□ -0.72
TVP23B-203ENST00000482741 CALR3Q96L12 384 aaKnown RBP10.54□□□□□ -0.72
TVP23B-203ENST00000482741 DCAF11Q8TEB1 546 aa10.54□□□□□ -0.72
TVP23B-203ENST00000482741 NUTM2FA1L443 756 aa10.53□□□□□ -0.72
TVP23B-203ENST00000482741 FOSBP53539 338 aa10.53□□□□□ -0.72
TVP23B-203ENST00000482741 REPIN1Q9BWE0 567 aaKnown RBP10.53□□□□□ -0.72
TVP23B-203ENST00000482741 SNRKQ9NRH2 765 aa10.53□□□□□ -0.72
TVP23B-203ENST00000482741 DOT1LQ8TEK3 1739 aa10.52□□□□□ -0.73
TVP23B-203ENST00000482741 NBPF1Q3BBV0 1214 aa10.52□□□□□ -0.73
TVP23B-203ENST00000482741 CFAP70Q5T0N1 1121 aa10.52□□□□□ -0.73
TVP23B-203ENST00000482741 CCER1Q8TC90 406 aaPredicted RBP10.51□□□□□ -0.73
TVP23B-203ENST00000482741 PCDHB8Q9UN66 801 aa10.51□□□□□ -0.73
TVP23B-203ENST00000482741 PCDHB13Q9Y5F0 798 aa10.51□□□□□ -0.73
TVP23B-203ENST00000482741 BRWD3Q6RI45 1802 aa10.51□□□□□ -0.73
TVP23B-203ENST00000482741 CCDC136Q96JN2 1154 aa10.51□□□□□ -0.73
TVP23B-203ENST00000482741 ARAP2Q8WZ64 1704 aa10.51□□□□□ -0.73
TVP23B-203ENST00000482741 SKIV2LQ15477 1246 aaKnown RBP10.5□□□□□ -0.73
TVP23B-203ENST00000482741 COG6Q9Y2V7 657 aa10.5□□□□□ -0.73
TVP23B-203ENST00000482741 LRRC37AA6NMS7 1700 aa10.5□□□□□ -0.73
TVP23B-203ENST00000482741 LAMB1P07942 1786 aa10.5□□□□□ -0.73
TVP23B-203ENST00000482741 TXNDC2Q86VQ3 553 aa10.5□□□□□ -0.73
TVP23B-203ENST00000482741 PCMTD1Q96MG8 357 aaPredicted RBP10.5□□□□□ -0.73
TVP23B-203ENST00000482741 C11orf95C9JLR9 678 aaPredicted RBP10.49□□□□□ -0.73
TVP23B-203ENST00000482741 ATRNO75882 1429 aa10.49□□□□□ -0.73
TVP23B-203ENST00000482741 TNS2Q63HR2 1409 aa10.49□□□□□ -0.73
TVP23B-203ENST00000482741 ZNF521Q96K83 1311 aa10.49□□□□□ -0.73
TVP23B-203ENST00000482741 KIAA1522Q9P206 1035 aaPredicted RBP10.49□□□□□ -0.73
TVP23B-203ENST00000482741 MRRFQ96E11 262 aaKnown RBP10.48□□□□□ -0.73
TVP23B-203ENST00000482741 SOS1Q07889 1333 aaPredicted RBP10.48□□□□□ -0.73
TVP23B-203ENST00000482741 NSD3Q9BZ95 1437 aa10.48□□□□□ -0.73
TVP23B-203ENST00000482741 DPYSL4O14531 572 aa10.48□□□□□ -0.73
TVP23B-203ENST00000482741 C19orf44Q9H6X5 657 aa10.48□□□□□ -0.73
TVP23B-203ENST00000482741 MSH6P52701 1360 aa10.48□□□□□ -0.73
TVP23B-203ENST00000482741 ZNF646O15015 1829 aaPredicted RBP10.48□□□□□ -0.73
TVP23B-203ENST00000482741 COL5A2P05997 1499 aaPredicted RBP10.48□□□□□ -0.73
TVP23B-203ENST00000482741 ARIH1Q9Y4X5 557 aaPredicted RBP10.48□□□□□ -0.73
TVP23B-203ENST00000482741 GIGYF2Q6Y7W6 1299 aaKnown RBP10.47□□□□□ -0.73
TVP23B-203ENST00000482741 PXDNLA1KZ92 1463 aa10.47□□□□□ -0.73
TVP23B-203ENST00000482741 GRXCR2A6NFK2 248 aa10.47□□□□□ -0.73
TVP23B-203ENST00000482741 ABL2P42684 1182 aa10.47□□□□□ -0.73
TVP23B-203ENST00000482741 CARD11Q9BXL7 1154 aa10.47□□□□□ -0.73
TVP23B-203ENST00000482741 TTC21BQ7Z4L5 1316 aa10.46□□□□□ -0.74
TVP23B-203ENST00000482741 MYBBP1AQ9BQG0 1328 aaKnown RBP10.46□□□□□ -0.74
TVP23B-203ENST00000482741 PPARGC1BQ86YN6 1023 aaKnown RBP10.45□□□□□ -0.74
TVP23B-203ENST00000482741 AMOTL2Q9Y2J4 779 aa10.45□□□□□ -0.74
TVP23B-203ENST00000482741 ESF1Q9H501 851 aaKnown RBP10.45□□□□□ -0.74
TVP23B-203ENST00000482741 GLMNQ92990 594 aa10.45□□□□□ -0.74
TVP23B-203ENST00000482741 BABAM1Q9NWV8 329 aa10.45□□□□□ -0.74
TVP23B-203ENST00000482741 KCPQ6ZWJ8 1503 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms