RNA–Protein interactions for RNA: ENST00000482257.1

HLA-F-225, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-225ENST00000482257 DEFB132Q7Z7B7 95 aa20.55■□□□□ 0.88
HLA-F-225ENST00000482257 ADAMTS8Q9UP79 889 aa20.55■□□□□ 0.88
HLA-F-225ENST00000482257 WNK3Q9BYP7 1800 aa20.55■□□□□ 0.88
HLA-F-225ENST00000482257 THRAP3Q9Y2W1 955 aaKnown RBP20.54■□□□□ 0.88
HLA-F-225ENST00000482257 KDRP35968 1356 aa20.54■□□□□ 0.88
HLA-F-225ENST00000482257 LRRC37A3O60309 1634 aa20.53■□□□□ 0.88
HLA-F-225ENST00000482257 HMOX1P09601 288 aa20.53■□□□□ 0.88
HLA-F-225ENST00000482257 TNS1Q9HBL0 1735 aaKnown RBP20.53■□□□□ 0.88
HLA-F-225ENST00000482257 NCAPD2Q15021 1401 aa20.53■□□□□ 0.88
HLA-F-225ENST00000482257 SRCAPQ6ZRS2 3230 aa20.51■□□□□ 0.87
HLA-F-225ENST00000482257 RSPH6AQ9H0K4 717 aa20.51■□□□□ 0.87
HLA-F-225ENST00000482257 DISP2A7MBM2 1401 aa20.51■□□□□ 0.87
HLA-F-225ENST00000482257 PLEKHG2Q9H7P9 1386 aa20.5■□□□□ 0.87
HLA-F-225ENST00000482257 USHBP1Q8N6Y0 703 aa20.5■□□□□ 0.87
HLA-F-225ENST00000482257 RAPGEF4Q8WZA2 1011 aa20.5■□□□□ 0.87
HLA-F-225ENST00000482257 MAPK8IP3Q9UPT6 1336 aa20.5■□□□□ 0.87
HLA-F-225ENST00000482257 PRKAR2BP31323 418 aa20.49■□□□□ 0.87
HLA-F-225ENST00000482257 AEBP1Q8IUX7 1158 aa20.49■□□□□ 0.87
HLA-F-225ENST00000482257 RUNDC1Q96C34 613 aa20.49■□□□□ 0.87
HLA-F-225ENST00000482257 CDCA7Q9BWT1 371 aaPredicted RBP20.48■□□□□ 0.87
HLA-F-225ENST00000482257 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
HLA-F-225ENST00000482257 IL2RBP14784 551 aa20.46■□□□□ 0.87
HLA-F-225ENST00000482257 PDE3BQ13370 1112 aa20.46■□□□□ 0.87
HLA-F-225ENST00000482257 AMOTQ4VCS5 1084 aa20.45■□□□□ 0.86
HLA-F-225ENST00000482257 CCDC146Q8IYE0 955 aa20.45■□□□□ 0.86
HLA-F-225ENST00000482257 PLEKHF1Q96S99 279 aa20.45■□□□□ 0.86
HLA-F-225ENST00000482257 TRIM37O94972 964 aa20.44■□□□□ 0.86
HLA-F-225ENST00000482257 SF3B2Q13435 895 aaKnown RBP20.44■□□□□ 0.86
HLA-F-225ENST00000482257 PLEKHO1Q53GL0 409 aaPredicted RBP20.44■□□□□ 0.86
HLA-F-225ENST00000482257 FAM196AQ6ZSG2 479 aa20.44■□□□□ 0.86
HLA-F-225ENST00000482257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.43■□□□□ 0.86
HLA-F-225ENST00000482257 EN1Q05925 392 aaPredicted RBP20.42■□□□□ 0.86
HLA-F-225ENST00000482257 GAS2L2Q8NHY3 880 aa20.42■□□□□ 0.86
HLA-F-225ENST00000482257 SPG7Q9UQ90 795 aa20.42■□□□□ 0.86
HLA-F-225ENST00000482257 DDB1Q16531 1140 aa20.41■□□□□ 0.86
HLA-F-225ENST00000482257 NGEFQ8N5V2 710 aa20.41■□□□□ 0.86
HLA-F-225ENST00000482257 MEGF6O75095 1541 aa20.41■□□□□ 0.86
HLA-F-225ENST00000482257 OVOS2A0A0G2JMS6 1433 aa20.4■□□□□ 0.86
HLA-F-225ENST00000482257 BAG6P46379 1132 aa20.4■□□□□ 0.86
HLA-F-225ENST00000482257 MARCH10Q8NA82 808 aaPredicted RBP20.4■□□□□ 0.86
HLA-F-225ENST00000482257 SBF2Q86WG5 1849 aa20.39■□□□□ 0.86
HLA-F-225ENST00000482257 TNS2Q63HR2 1409 aa20.39■□□□□ 0.85
HLA-F-225ENST00000482257 APAF1O14727 1248 aa20.39■□□□□ 0.85
HLA-F-225ENST00000482257 PHACTR3Q96KR7 559 aa20.39■□□□□ 0.85
HLA-F-225ENST00000482257 NFE2L2Q16236 605 aa20.38■□□□□ 0.85
HLA-F-225ENST00000482257 NCBP3Q53F19 620 aaKnown RBP20.38■□□□□ 0.85
HLA-F-225ENST00000482257 ZCRB1Q8TBF4 217 aaKnown RBP20.38■□□□□ 0.85
HLA-F-225ENST00000482257 PKD1L3Q7Z443 1732 aa20.38■□□□□ 0.85
HLA-F-225ENST00000482257 EXOC5O00471 708 aa20.37■□□□□ 0.85
HLA-F-225ENST00000482257 EZH2Q15910 746 aaKnown RBP20.37■□□□□ 0.85
HLA-F-225ENST00000482257 PTF1AQ7RTS3 328 aa20.37■□□□□ 0.85
HLA-F-225ENST00000482257 CAMKK2Q96RR4 588 aa20.37■□□□□ 0.85
HLA-F-225ENST00000482257 TMPOP42166 694 aaKnown RBP20.36■□□□□ 0.85
HLA-F-225ENST00000482257 LMOD3Q0VAK6 560 aa20.36■□□□□ 0.85
HLA-F-225ENST00000482257 MTHFSDQ2M296 383 aaKnown RBP20.36■□□□□ 0.85
HLA-F-225ENST00000482257 C1orf141Q5JVX7 400 aa20.36■□□□□ 0.85
HLA-F-225ENST00000482257 ZNF530Q6P9A1 599 aaPredicted RBP20.36■□□□□ 0.85
HLA-F-225ENST00000482257 PCDH11XQ9BZA7 1347 aa20.35■□□□□ 0.85
HLA-F-225ENST00000482257 PCDH11YQ9BZA8 1340 aa20.35■□□□□ 0.85
HLA-F-225ENST00000482257 HNRNPUQ00839 825 aaKnown RBP eCLIP20.35■□□□□ 0.85
HLA-F-225ENST00000482257 RREB1Q92766 1687 aa20.35■□□□□ 0.85
HLA-F-225ENST00000482257 BCL9O00512 1426 aa20.35■□□□□ 0.85
HLA-F-225ENST00000482257 APBA3O96018 575 aa20.34■□□□□ 0.85
HLA-F-225ENST00000482257 RIPK4P57078 832 aa20.34■□□□□ 0.85
HLA-F-225ENST00000482257 DLG5Q8TDM6 1919 aa20.33■□□□□ 0.85
HLA-F-225ENST00000482257 HTATSF1O43719 755 aaKnown RBP20.33■□□□□ 0.85
HLA-F-225ENST00000482257 HSP90AB1P08238 724 aaKnown RBP20.33■□□□□ 0.85
HLA-F-225ENST00000482257 NEUROD2Q15784 382 aa20.33■□□□□ 0.85
HLA-F-225ENST00000482257 AKAP4Q5JQC9 854 aa20.33■□□□□ 0.85
HLA-F-225ENST00000482257 IFNL2Q8IZJ0 200 aa20.33■□□□□ 0.85
HLA-F-225ENST00000482257 GNAT3A8MTJ3 354 aa20.32■□□□□ 0.84
HLA-F-225ENST00000482257 RTF1Q92541 710 aaKnown RBP20.32■□□□□ 0.84
HLA-F-225ENST00000482257 RRP7AQ9Y3A4 280 aaKnown RBP20.32■□□□□ 0.84
HLA-F-225ENST00000482257 NUP188Q5SRE5 1749 aa20.31■□□□□ 0.84
HLA-F-225ENST00000482257 CCDC27Q2M243 656 aa20.31■□□□□ 0.84
HLA-F-225ENST00000482257 MAP3K5Q99683 1374 aa20.31■□□□□ 0.84
HLA-F-225ENST00000482257 PHKG2P15735 406 aa20.29■□□□□ 0.84
HLA-F-225ENST00000482257 DDX54Q8TDD1 881 aaKnown RBP20.29■□□□□ 0.84
HLA-F-225ENST00000482257 SHANK3Q9BYB0 1731 aa20.29■□□□□ 0.84
HLA-F-225ENST00000482257 PSDA5PKW4 1024 aaPredicted RBP20.28■□□□□ 0.84
HLA-F-225ENST00000482257 CALD1Q05682 793 aaKnown RBP20.28■□□□□ 0.84
HLA-F-225ENST00000482257 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
HLA-F-225ENST00000482257 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
HLA-F-225ENST00000482257 RGPD3A6NKT7 1758 aaPredicted RBP20.27■□□□□ 0.84
HLA-F-225ENST00000482257 RGPD4Q7Z3J3 1758 aa20.27■□□□□ 0.84
HLA-F-225ENST00000482257 CYP27B1O15528 508 aa20.27■□□□□ 0.84
HLA-F-225ENST00000482257 BCL11BQ9C0K0 894 aaPredicted RBP20.27■□□□□ 0.84
HLA-F-225ENST00000482257 ZBED9Q6R2W3 1325 aa20.27■□□□□ 0.83
HLA-F-225ENST00000482257 NHSQ6T4R5 1651 aa20.26■□□□□ 0.83
HLA-F-225ENST00000482257 KCNQ2O43526 872 aa20.26■□□□□ 0.83
HLA-F-225ENST00000482257 DCAF5Q96JK2 942 aa20.26■□□□□ 0.83
HLA-F-225ENST00000482257 NKX1-1Q15270 411 aaPredicted RBP20.25■□□□□ 0.83
HLA-F-225ENST00000482257 WWC1Q8IX03 1113 aa20.25■□□□□ 0.83
HLA-F-225ENST00000482257 TRIM35Q9UPQ4 493 aa20.25■□□□□ 0.83
HLA-F-225ENST00000482257 SENP3-EIF4A1A0A087X0R7 540 aa20.24■□□□□ 0.83
HLA-F-225ENST00000482257 VIRMAQ69YN4 1812 aaKnown RBP20.24■□□□□ 0.83
HLA-F-225ENST00000482257 R3HDM1Q15032 1099 aaKnown RBP20.23■□□□□ 0.83
HLA-F-225ENST00000482257 MPRIPQ6WCQ1 1025 aa20.23■□□□□ 0.83
HLA-F-225ENST00000482257 WDR63Q8IWG1 891 aa20.23■□□□□ 0.83
HLA-F-225ENST00000482257 ACSBG1Q96GR2 724 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms