RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 OVOS2A0A0G2JMS6 1433 aa25.76■■□□□ 1.71
SEMA4D-218ENST00000482128 DISP2A7MBM2 1401 aa25.76■■□□□ 1.71
SEMA4D-218ENST00000482128 PARP4Q9UKK3 1724 aaKnown RBP25.75■■□□□ 1.71
SEMA4D-218ENST00000482128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.75■■□□□ 1.71
SEMA4D-218ENST00000482128 GAS2L2Q8NHY3 880 aa25.74■■□□□ 1.71
SEMA4D-218ENST00000482128 SPG7Q9UQ90 795 aa25.74■■□□□ 1.71
SEMA4D-218ENST00000482128 FAM98CQ17RN3 349 aaKnown RBP25.73■■□□□ 1.71
SEMA4D-218ENST00000482128 PHACTR3Q96KR7 559 aa25.73■■□□□ 1.71
SEMA4D-218ENST00000482128 GLI3P10071 1580 aa25.73■■□□□ 1.71
SEMA4D-218ENST00000482128 RBM6P78332 1123 aaKnown RBP25.72■■□□□ 1.71
SEMA4D-218ENST00000482128 WNK3Q9BYP7 1800 aa25.71■■□□□ 1.71
SEMA4D-218ENST00000482128 A0A0G2JS52 829 aa25.7■■□□□ 1.7
SEMA4D-218ENST00000482128 MYT1Q01538 1121 aa25.7■■□□□ 1.7
SEMA4D-218ENST00000482128 ZCRB1Q8TBF4 217 aaKnown RBP25.7■■□□□ 1.7
SEMA4D-218ENST00000482128 APAF1O14727 1248 aa25.69■■□□□ 1.7
SEMA4D-218ENST00000482128 NFE2L2Q16236 605 aa25.69■■□□□ 1.7
SEMA4D-218ENST00000482128 RGS17Q9UGC6 210 aaPredicted RBP25.69■■□□□ 1.7
SEMA4D-218ENST00000482128 PCDH11XQ9BZA7 1347 aa25.68■■□□□ 1.7
SEMA4D-218ENST00000482128 PCDH11YQ9BZA8 1340 aa25.68■■□□□ 1.7
SEMA4D-218ENST00000482128 EXOC5O00471 708 aa25.68■■□□□ 1.7
SEMA4D-218ENST00000482128 DDB1Q16531 1140 aa25.68■■□□□ 1.7
SEMA4D-218ENST00000482128 MTHFSDQ2M296 383 aaKnown RBP25.68■■□□□ 1.7
SEMA4D-218ENST00000482128 ZNF530Q6P9A1 599 aaPredicted RBP25.68■■□□□ 1.7
SEMA4D-218ENST00000482128 TNS2Q63HR2 1409 aa25.68■■□□□ 1.7
SEMA4D-218ENST00000482128 RXRBP28702 533 aa25.67■■□□□ 1.7
SEMA4D-218ENST00000482128 C1orf141Q5JVX7 400 aa25.67■■□□□ 1.7
SEMA4D-218ENST00000482128 NGEFQ8N5V2 710 aa25.67■■□□□ 1.7
SEMA4D-218ENST00000482128 PKD1L3Q7Z443 1732 aa25.66■■□□□ 1.7
SEMA4D-218ENST00000482128 ONECUT3O60422 494 aaPredicted RBP25.66■■□□□ 1.7
SEMA4D-218ENST00000482128 TMPOP42166 694 aaKnown RBP25.66■■□□□ 1.7
SEMA4D-218ENST00000482128 LMOD3Q0VAK6 560 aa25.65■■□□□ 1.7
SEMA4D-218ENST00000482128 THSD7AQ9UPZ6 1657 aa25.64■■□□□ 1.7
SEMA4D-218ENST00000482128 RIPK4P57078 832 aa25.63■■□□□ 1.69
SEMA4D-218ENST00000482128 HNRNPUQ00839 825 aaKnown RBP eCLIP25.63■■□□□ 1.69
SEMA4D-218ENST00000482128 NCBP3Q53F19 620 aaKnown RBP25.63■■□□□ 1.69
SEMA4D-218ENST00000482128 AKAP4Q5JQC9 854 aa25.63■■□□□ 1.69
SEMA4D-218ENST00000482128 IFNL2Q8IZJ0 200 aa25.63■■□□□ 1.69
SEMA4D-218ENST00000482128 RRP7AQ9Y3A4 280 aaKnown RBP25.63■■□□□ 1.69
SEMA4D-218ENST00000482128 MAP3K5Q99683 1374 aa25.63■■□□□ 1.69
SEMA4D-218ENST00000482128 LRRC37A3O60309 1634 aa25.63■■□□□ 1.69
SEMA4D-218ENST00000482128 HSP90AB1P08238 724 aaKnown RBP25.62■■□□□ 1.69
SEMA4D-218ENST00000482128 NEUROD2Q15784 382 aa25.62■■□□□ 1.69
SEMA4D-218ENST00000482128 POTEAQ6S8J7 498 aa25.62■■□□□ 1.69
SEMA4D-218ENST00000482128 SEPT12Q8IYM1 358 aa25.62■■□□□ 1.69
SEMA4D-218ENST00000482128 GNAT3A8MTJ3 354 aa25.61■■□□□ 1.69
SEMA4D-218ENST00000482128 DDX54Q8TDD1 881 aaKnown RBP25.61■■□□□ 1.69
SEMA4D-218ENST00000482128 RTF1Q92541 710 aaKnown RBP25.61■■□□□ 1.69
SEMA4D-218ENST00000482128 HTATSF1O43719 755 aaKnown RBP25.6■■□□□ 1.69
SEMA4D-218ENST00000482128 PHKG2P15735 406 aa25.6■■□□□ 1.69
SEMA4D-218ENST00000482128 PDE3BQ13370 1112 aa25.6■■□□□ 1.69
SEMA4D-218ENST00000482128 CYP27B1O15528 508 aa25.59■■□□□ 1.69
SEMA4D-218ENST00000482128 CCDC27Q2M243 656 aa25.58■■□□□ 1.69
SEMA4D-218ENST00000482128 SENP3-EIF4A1A0A087X0R7 540 aa25.56■■□□□ 1.68
SEMA4D-218ENST00000482128 SALL2Q9Y467 1007 aaPredicted RBP25.56■■□□□ 1.68
SEMA4D-218ENST00000482128 DCAF5Q96JK2 942 aa25.55■■□□□ 1.68
SEMA4D-218ENST00000482128 YTHDC1Q96MU7 727 aaKnown RBP25.55■■□□□ 1.68
SEMA4D-218ENST00000482128 SHANK3Q9BYB0 1731 aa25.54■■□□□ 1.68
SEMA4D-218ENST00000482128 NKX1-1Q15270 411 aaPredicted RBP25.54■■□□□ 1.68
SEMA4D-218ENST00000482128 CALD1Q05682 793 aaKnown RBP25.53■■□□□ 1.68
SEMA4D-218ENST00000482128 TRIM35Q9UPQ4 493 aa25.53■■□□□ 1.68
SEMA4D-218ENST00000482128 RGS12O14924 1447 aa25.53■■□□□ 1.68
SEMA4D-218ENST00000482128 MPRIPQ6WCQ1 1025 aa25.52■■□□□ 1.68
SEMA4D-218ENST00000482128 MARCH10Q8NA82 808 aaPredicted RBP25.52■■□□□ 1.68
SEMA4D-218ENST00000482128 MCM10Q7L590 875 aa25.51■■□□□ 1.67
SEMA4D-218ENST00000482128 KRT27Q7Z3Y8 459 aa25.51■■□□□ 1.67
SEMA4D-218ENST00000482128 WWC1Q8IX03 1113 aa25.51■■□□□ 1.67
SEMA4D-218ENST00000482128 ZBED9Q6R2W3 1325 aa25.51■■□□□ 1.67
SEMA4D-218ENST00000482128 RNMTO43148 476 aaKnown RBP25.5■■□□□ 1.67
SEMA4D-218ENST00000482128 DLG5Q8TDM6 1919 aa25.49■■□□□ 1.67
SEMA4D-218ENST00000482128 KDM6AO15550 1401 aaPredicted RBP25.48■■□□□ 1.67
SEMA4D-218ENST00000482128 CEMIPQ8WUJ3 1361 aa25.48■■□□□ 1.67
SEMA4D-218ENST00000482128 DCTN1Q14203 1278 aa25.48■■□□□ 1.67
SEMA4D-218ENST00000482128 WDR63Q8IWG1 891 aa25.48■■□□□ 1.67
SEMA4D-218ENST00000482128 IL17REQ8NFR9 667 aa25.48■■□□□ 1.67
SEMA4D-218ENST00000482128 TEFQ10587 303 aa25.47■■□□□ 1.67
SEMA4D-218ENST00000482128 LGR6Q9HBX8 967 aa25.47■■□□□ 1.67
SEMA4D-218ENST00000482128 ZNF521Q96K83 1311 aa25.46■■□□□ 1.67
SEMA4D-218ENST00000482128 ERVV-2B6SEH9 535 aa25.46■■□□□ 1.67
SEMA4D-218ENST00000482128 BCL9O00512 1426 aa25.46■■□□□ 1.67
SEMA4D-218ENST00000482128 ADAMTS7Q9UKP4 1686 aa25.45■■□□□ 1.67
SEMA4D-218ENST00000482128 THUMPD2Q9BTF0 503 aaKnown RBP25.45■■□□□ 1.66
SEMA4D-218ENST00000482128 IL16Q14005 1332 aa25.44■■□□□ 1.66
SEMA4D-218ENST00000482128 CABP4P57796 275 aa25.43■■□□□ 1.66
SEMA4D-218ENST00000482128 SLC52A2Q9HAB3 445 aa25.43■■□□□ 1.66
SEMA4D-218ENST00000482128 MRC1P22897 1456 aa25.42■■□□□ 1.66
SEMA4D-218ENST00000482128 SCN11AQ9UI33 1791 aa25.42■■□□□ 1.66
SEMA4D-218ENST00000482128 GOLGA2Q08379 1002 aa25.42■■□□□ 1.66
SEMA4D-218ENST00000482128 FAM196AQ6ZSG2 479 aa25.42■■□□□ 1.66
SEMA4D-218ENST00000482128 BRWD3Q6RI45 1802 aa25.4■■□□□ 1.66
SEMA4D-218ENST00000482128 GNAI1P63096 354 aa25.4■■□□□ 1.66
SEMA4D-218ENST00000482128 TAF7Q15545 349 aaPredicted RBP25.4■■□□□ 1.66
SEMA4D-218ENST00000482128 IFT57Q9NWB7 429 aa25.4■■□□□ 1.66
SEMA4D-218ENST00000482128 TMOD3Q9NYL9 352 aa25.4■■□□□ 1.66
SEMA4D-218ENST00000482128 SYTL4Q96C24 671 aaPredicted RBP25.39■■□□□ 1.66
SEMA4D-218ENST00000482128 BABAM1Q9NWV8 329 aa25.39■■□□□ 1.66
SEMA4D-218ENST00000482128 FAM182BQ5T319 152 aa25.38■■□□□ 1.65
SEMA4D-218ENST00000482128 NFATC2IPQ8NCF5 419 aa25.38■■□□□ 1.65
SEMA4D-218ENST00000482128 ACSBG1Q96GR2 724 aa25.38■■□□□ 1.65
SEMA4D-218ENST00000482128 CFAP44Q96MT7 982 aa25.38■■□□□ 1.65
SEMA4D-218ENST00000482128 MYH16Q9H6N6 1097 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms