RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 FAM98CQ17RN3 349 aaKnown RBP30.57■■■□□ 2.48
SHISA4-203ENST00000481699 BARGINQ6ZT62 677 aa30.57■■■□□ 2.48
SHISA4-203ENST00000481699 CCDC146Q8IYE0 955 aa30.57■■■□□ 2.48
SHISA4-203ENST00000481699 RUNDC1Q96C34 613 aa30.55■■■□□ 2.48
SHISA4-203ENST00000481699 RBM6P78332 1123 aaKnown RBP30.54■■■□□ 2.48
SHISA4-203ENST00000481699 PLEKHO1Q53GL0 409 aaPredicted RBP30.54■■■□□ 2.48
SHISA4-203ENST00000481699 SPG7Q9UQ90 795 aa30.53■■■□□ 2.48
SHISA4-203ENST00000481699 AMOTQ4VCS5 1084 aa30.52■■■□□ 2.48
SHISA4-203ENST00000481699 MEGF6O75095 1541 aa30.52■■■□□ 2.48
SHISA4-203ENST00000481699 GLI3P10071 1580 aa30.5■■■□□ 2.47
SHISA4-203ENST00000481699 RGS12O14924 1447 aa30.5■■■□□ 2.47
SHISA4-203ENST00000481699 PLEKHF1Q96S99 279 aa30.5■■■□□ 2.47
SHISA4-203ENST00000481699 PLEKHG2Q9H7P9 1386 aa30.5■■■□□ 2.47
SHISA4-203ENST00000481699 PARP4Q9UKK3 1724 aaKnown RBP30.5■■■□□ 2.47
SHISA4-203ENST00000481699 OVOS2A0A0G2JMS6 1433 aa30.49■■■□□ 2.47
SHISA4-203ENST00000481699 DISP2A7MBM2 1401 aa30.49■■■□□ 2.47
SHISA4-203ENST00000481699 EXOC5O00471 708 aa30.49■■■□□ 2.47
SHISA4-203ENST00000481699 ZCRB1Q8TBF4 217 aaKnown RBP30.49■■■□□ 2.47
SHISA4-203ENST00000481699 GAS2L2Q8NHY3 880 aa30.48■■■□□ 2.47
SHISA4-203ENST00000481699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.48■■■□□ 2.47
SHISA4-203ENST00000481699 DDB1Q16531 1140 aa30.47■■■□□ 2.47
SHISA4-203ENST00000481699 PHACTR3Q96KR7 559 aa30.47■■■□□ 2.47
SHISA4-203ENST00000481699 ZNF530Q6P9A1 599 aaPredicted RBP30.45■■■□□ 2.47
SHISA4-203ENST00000481699 C1orf141Q5JVX7 400 aa30.44■■■□□ 2.46
SHISA4-203ENST00000481699 WNK3Q9BYP7 1800 aa30.44■■■□□ 2.46
SHISA4-203ENST00000481699 MTHFSDQ2M296 383 aaKnown RBP30.43■■■□□ 2.46
SHISA4-203ENST00000481699 SEPT12Q8IYM1 358 aa30.43■■■□□ 2.46
SHISA4-203ENST00000481699 PCDH11XQ9BZA7 1347 aa30.43■■■□□ 2.46
SHISA4-203ENST00000481699 PCDH11YQ9BZA8 1340 aa30.43■■■□□ 2.46
SHISA4-203ENST00000481699 APAF1O14727 1248 aa30.42■■■□□ 2.46
SHISA4-203ENST00000481699 ONECUT3O60422 494 aaPredicted RBP30.42■■■□□ 2.46
SHISA4-203ENST00000481699 NFE2L2Q16236 605 aa30.42■■■□□ 2.46
SHISA4-203ENST00000481699 DDX54Q8TDD1 881 aaKnown RBP30.42■■■□□ 2.46
SHISA4-203ENST00000481699 TNS2Q63HR2 1409 aa30.41■■■□□ 2.46
SHISA4-203ENST00000481699 PDE3BQ13370 1112 aa30.41■■■□□ 2.46
SHISA4-203ENST00000481699 NEUROD2Q15784 382 aa30.39■■■□□ 2.46
SHISA4-203ENST00000481699 TMPOP42166 694 aaKnown RBP30.38■■■□□ 2.45
SHISA4-203ENST00000481699 IFNL2Q8IZJ0 200 aa30.38■■■□□ 2.45
SHISA4-203ENST00000481699 RRP7AQ9Y3A4 280 aaKnown RBP30.38■■■□□ 2.45
SHISA4-203ENST00000481699 THSD7AQ9UPZ6 1657 aa30.37■■■□□ 2.45
SHISA4-203ENST00000481699 RIPK4P57078 832 aa30.37■■■□□ 2.45
SHISA4-203ENST00000481699 AKAP4Q5JQC9 854 aa30.37■■■□□ 2.45
SHISA4-203ENST00000481699 PKD1L3Q7Z443 1732 aa30.36■■■□□ 2.45
SHISA4-203ENST00000481699 LMOD3Q0VAK6 560 aa30.36■■■□□ 2.45
SHISA4-203ENST00000481699 RTF1Q92541 710 aaKnown RBP30.36■■■□□ 2.45
SHISA4-203ENST00000481699 LRRC37A3O60309 1634 aa30.36■■■□□ 2.45
SHISA4-203ENST00000481699 GNAT3A8MTJ3 354 aa30.35■■■□□ 2.45
SHISA4-203ENST00000481699 HSP90AB1P08238 724 aaKnown RBP30.35■■■□□ 2.45
SHISA4-203ENST00000481699 SRCAPQ6ZRS2 3230 aa30.35■■■□□ 2.45
SHISA4-203ENST00000481699 MAP3K5Q99683 1374 aa30.34■■■□□ 2.45
SHISA4-203ENST00000481699 SENP3-EIF4A1A0A087X0R7 540 aa30.34■■■□□ 2.45
SHISA4-203ENST00000481699 PHKG2P15735 406 aa30.34■■■□□ 2.45
SHISA4-203ENST00000481699 CYP27B1O15528 508 aa30.33■■■□□ 2.45
SHISA4-203ENST00000481699 SALL2Q9Y467 1007 aaPredicted RBP30.33■■■□□ 2.45
SHISA4-203ENST00000481699 HNRNPUQ00839 825 aaKnown RBP eCLIP30.32■■■□□ 2.44
SHISA4-203ENST00000481699 NGEFQ8N5V2 710 aa30.32■■■□□ 2.44
SHISA4-203ENST00000481699 HTATSF1O43719 755 aaKnown RBP30.29■■■□□ 2.44
SHISA4-203ENST00000481699 KRT27Q7Z3Y8 459 aa30.29■■■□□ 2.44
SHISA4-203ENST00000481699 MARCH10Q8NA82 808 aaPredicted RBP30.28■■■□□ 2.44
SHISA4-203ENST00000481699 MPRIPQ6WCQ1 1025 aa30.27■■■□□ 2.44
SHISA4-203ENST00000481699 DCAF5Q96JK2 942 aa30.27■■■□□ 2.44
SHISA4-203ENST00000481699 YTHDC1Q96MU7 727 aaKnown RBP30.26■■■□□ 2.43
SHISA4-203ENST00000481699 NCBP3Q53F19 620 aaKnown RBP30.25■■■□□ 2.43
SHISA4-203ENST00000481699 SHANK3Q9BYB0 1731 aa30.25■■■□□ 2.43
SHISA4-203ENST00000481699 NKX1-1Q15270 411 aaPredicted RBP30.24■■■□□ 2.43
SHISA4-203ENST00000481699 CCDC27Q2M243 656 aa30.23■■■□□ 2.43
SHISA4-203ENST00000481699 MCM10Q7L590 875 aa30.23■■■□□ 2.43
SHISA4-203ENST00000481699 RNMTO43148 476 aaKnown RBP30.22■■■□□ 2.43
SHISA4-203ENST00000481699 CALD1Q05682 793 aaKnown RBP30.21■■■□□ 2.43
SHISA4-203ENST00000481699 DCTN1Q14203 1278 aa30.21■■■□□ 2.43
SHISA4-203ENST00000481699 TRIM35Q9UPQ4 493 aa30.21■■■□□ 2.43
SHISA4-203ENST00000481699 TEFQ10587 303 aa30.2■■■□□ 2.43
SHISA4-203ENST00000481699 LGR6Q9HBX8 967 aa30.2■■■□□ 2.43
SHISA4-203ENST00000481699 IL17REQ8NFR9 667 aa30.19■■■□□ 2.42
SHISA4-203ENST00000481699 CABP4P57796 275 aa30.18■■■□□ 2.42
SHISA4-203ENST00000481699 FAM182BQ5T319 152 aa30.18■■■□□ 2.42
SHISA4-203ENST00000481699 WWC1Q8IX03 1113 aa30.18■■■□□ 2.42
SHISA4-203ENST00000481699 DLG5Q8TDM6 1919 aa30.18■■■□□ 2.42
SHISA4-203ENST00000481699 KDM6AO15550 1401 aaPredicted RBP30.17■■■□□ 2.42
SHISA4-203ENST00000481699 FAM196AQ6ZSG2 479 aa30.17■■■□□ 2.42
SHISA4-203ENST00000481699 THUMPD2Q9BTF0 503 aaKnown RBP30.17■■■□□ 2.42
SHISA4-203ENST00000481699 ERVV-2B6SEH9 535 aa30.16■■■□□ 2.42
SHISA4-203ENST00000481699 SYTL4Q96C24 671 aaPredicted RBP30.16■■■□□ 2.42
SHISA4-203ENST00000481699 BRWD3Q6RI45 1802 aa30.16■■■□□ 2.42
SHISA4-203ENST00000481699 ACSBG1Q96GR2 724 aa30.14■■■□□ 2.42
SHISA4-203ENST00000481699 TMOD3Q9NYL9 352 aa30.14■■■□□ 2.42
SHISA4-203ENST00000481699 WDR63Q8IWG1 891 aa30.13■■■□□ 2.41
SHISA4-203ENST00000481699 CEMIPQ8WUJ3 1361 aa30.13■■■□□ 2.41
SHISA4-203ENST00000481699 SLC52A2Q9HAB3 445 aa30.12■■■□□ 2.41
SHISA4-203ENST00000481699 LAS1LQ9Y4W2 734 aaKnown RBP30.12■■■□□ 2.41
SHISA4-203ENST00000481699 ZBED9Q6R2W3 1325 aa30.12■■■□□ 2.41
SHISA4-203ENST00000481699 PRIM1P49642 420 aaKnown RBP30.11■■■□□ 2.41
SHISA4-203ENST00000481699 BCL9O00512 1426 aa30.11■■■□□ 2.41
SHISA4-203ENST00000481699 SCN11AQ9UI33 1791 aa30.1■■■□□ 2.41
SHISA4-203ENST00000481699 TAF7Q15545 349 aaPredicted RBP30.09■■■□□ 2.41
SHISA4-203ENST00000481699 NFATC2IPQ8NCF5 419 aa30.09■■■□□ 2.41
SHISA4-203ENST00000481699 GOLGA2Q08379 1002 aa30.08■■■□□ 2.41
SHISA4-203ENST00000481699 EP400Q96L91 3159 aa30.08■■■□□ 2.41
SHISA4-203ENST00000481699 ADAMTS7Q9UKP4 1686 aa30.07■■■□□ 2.41
SHISA4-203ENST00000481699 IL16Q14005 1332 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms