RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 NEUROD1Q13562 356 aa24.7■■□□□ 1.54
RXRB-203ENST00000481441 SYTL4Q96C24 671 aaPredicted RBP24.7■■□□□ 1.54
RXRB-203ENST00000481441 LTV1Q96GA3 475 aaPredicted RBP24.7■■□□□ 1.54
RXRB-203ENST00000481441 GOLGB1Q14789 3259 aaKnown RBP24.7■■□□□ 1.54
RXRB-203ENST00000481441 RGPD2P0DJD1 1756 aa24.69■■□□□ 1.54
RXRB-203ENST00000481441 YBX3P16989 372 aaKnown RBP eCLIP24.68■■□□□ 1.54
RXRB-203ENST00000481441 TERF2IPQ9NYB0 399 aa24.68■■□□□ 1.54
RXRB-203ENST00000481441 GRIN3BO60391 1043 aa24.66■■□□□ 1.54
RXRB-203ENST00000481441 IFFO2Q5TF58 517 aa24.66■■□□□ 1.54
RXRB-203ENST00000481441 CARD11Q9BXL7 1154 aa24.65■■□□□ 1.54
RXRB-203ENST00000481441 CCNL1Q9UK58 526 aaPredicted RBP24.65■■□□□ 1.54
RXRB-203ENST00000481441 COL23A1Q86Y22 540 aaPredicted RBP24.64■■□□□ 1.54
RXRB-203ENST00000481441 ZCRB1Q8TBF4 217 aaKnown RBP24.64■■□□□ 1.54
RXRB-203ENST00000481441 MEGF6O75095 1541 aa24.64■■□□□ 1.54
RXRB-203ENST00000481441 MAP3K19Q56UN5 1328 aa24.64■■□□□ 1.53
RXRB-203ENST00000481441 PUS7Q96PZ0 661 aaKnown RBP24.63■■□□□ 1.53
RXRB-203ENST00000481441 HOXC9P31274 260 aa24.62■■□□□ 1.53
RXRB-203ENST00000481441 MSH5O43196 834 aa24.61■■□□□ 1.53
RXRB-203ENST00000481441 C5P01031 1676 aa24.6■■□□□ 1.53
RXRB-203ENST00000481441 FBLN1P23142 703 aa24.6■■□□□ 1.53
RXRB-203ENST00000481441 USP47Q96K76 1375 aa24.59■■□□□ 1.53
RXRB-203ENST00000481441 ATP10DQ9P241 1426 aa24.59■■□□□ 1.53
RXRB-203ENST00000481441 AMPHP49418 695 aa24.59■■□□□ 1.53
RXRB-203ENST00000481441 MSL1Q68DK7 614 aa24.59■■□□□ 1.53
RXRB-203ENST00000481441 COG3Q96JB2 828 aa24.59■■□□□ 1.53
RXRB-203ENST00000481441 TAF1LQ8IZX4 1826 aa24.57■■□□□ 1.52
RXRB-203ENST00000481441 CEP350Q5VT06 3117 aa24.57■■□□□ 1.52
RXRB-203ENST00000481441 CD2APQ9Y5K6 639 aa24.56■■□□□ 1.52
RXRB-203ENST00000481441 RTL1A6NKG5 1358 aa24.54■■□□□ 1.52
RXRB-203ENST00000481441 CGNL1Q0VF96 1302 aa24.54■■□□□ 1.52
RXRB-203ENST00000481441 NBPF6Q5VWK0 638 aa24.54■■□□□ 1.52
RXRB-203ENST00000481441 NBPF4Q96M43 638 aa24.54■■□□□ 1.52
RXRB-203ENST00000481441 ADCY9O60503 1353 aa24.53■■□□□ 1.52
RXRB-203ENST00000481441 TESK2Q96S53 571 aa24.51■■□□□ 1.51
RXRB-203ENST00000481441 USHBP1Q8N6Y0 703 aa24.5■■□□□ 1.51
RXRB-203ENST00000481441 FLAD1Q8NFF5 587 aa24.5■■□□□ 1.51
RXRB-203ENST00000481441 GPBP1L1Q9HC44 474 aaPredicted RBP24.5■■□□□ 1.51
RXRB-203ENST00000481441 RRS1Q15050 365 aaKnown RBP24.49■■□□□ 1.51
RXRB-203ENST00000481441 RAPGEF4Q8WZA2 1011 aa24.49■■□□□ 1.51
RXRB-203ENST00000481441 PALLDQ8WX93 1383 aa24.48■■□□□ 1.51
RXRB-203ENST00000481441 TOGARAM1Q9Y4F4 1720 aa24.48■■□□□ 1.51
RXRB-203ENST00000481441 C4BP0C0L5 1744 aa24.47■■□□□ 1.51
RXRB-203ENST00000481441 ITGB4P16144 1822 aa24.47■■□□□ 1.51
RXRB-203ENST00000481441 HMGB2P26583 209 aaKnown RBP24.47■■□□□ 1.51
RXRB-203ENST00000481441 TATP17735 454 aaPredicted RBP24.46■■□□□ 1.51
RXRB-203ENST00000481441 UBR3Q6ZT12 1888 aa24.46■■□□□ 1.51
RXRB-203ENST00000481441 PCDH11XQ9BZA7 1347 aa24.45■■□□□ 1.51
RXRB-203ENST00000481441 PCDH11YQ9BZA8 1340 aa24.45■■□□□ 1.51
RXRB-203ENST00000481441 SMG6Q86US8 1419 aaKnown RBP24.45■■□□□ 1.5
RXRB-203ENST00000481441 HSPA6P17066 643 aa24.45■■□□□ 1.5
RXRB-203ENST00000481441 MPRIPQ6WCQ1 1025 aa24.44■■□□□ 1.5
RXRB-203ENST00000481441 AMIGO3Q86WK7 504 aa24.44■■□□□ 1.5
RXRB-203ENST00000481441 ST20-MTHFSA0A0A6YYL1 179 aa24.43■■□□□ 1.5
RXRB-203ENST00000481441 FYB1O15117 783 aa24.43■■□□□ 1.5
RXRB-203ENST00000481441 ZNF526Q8TF50 670 aaPredicted RBP24.42■■□□□ 1.5
RXRB-203ENST00000481441 INSRP06213 1382 aa24.42■■□□□ 1.5
RXRB-203ENST00000481441 CYP27B1O15528 508 aa24.41■■□□□ 1.5
RXRB-203ENST00000481441 HSP90AB2PQ58FF8 381 aa24.41■■□□□ 1.5
RXRB-203ENST00000481441 GGNBP2Q9H3C7 697 aa24.41■■□□□ 1.5
RXRB-203ENST00000481441 IGSF1Q8N6C5 1336 aa24.41■■□□□ 1.5
RXRB-203ENST00000481441 AK7Q96M32 723 aa24.4■■□□□ 1.5
RXRB-203ENST00000481441 PKD1L3Q7Z443 1732 aa24.4■■□□□ 1.5
RXRB-203ENST00000481441 MAP2P11137 1827 aaKnown RBP24.4■■□□□ 1.5
RXRB-203ENST00000481441 TONSLQ96HA7 1378 aa24.4■■□□□ 1.5
RXRB-203ENST00000481441 SMARCC1Q92922 1105 aaPredicted RBP24.39■■□□□ 1.5
RXRB-203ENST00000481441 SLC24A1O60721 1099 aa24.38■■□□□ 1.49
RXRB-203ENST00000481441 SMIM5Q71RC9 77 aa24.38■■□□□ 1.49
RXRB-203ENST00000481441 KIF20BQ96Q89 1820 aa24.38■■□□□ 1.49
RXRB-203ENST00000481441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.37■■□□□ 1.49
RXRB-203ENST00000481441 NSD3Q9BZ95 1437 aa24.37■■□□□ 1.49
RXRB-203ENST00000481441 WWC3Q9ULE0 1092 aa24.37■■□□□ 1.49
RXRB-203ENST00000481441 FLT4P35916 1363 aa24.37■■□□□ 1.49
RXRB-203ENST00000481441 KIF24Q5T7B8 1368 aa24.37■■□□□ 1.49
RXRB-203ENST00000481441 PHF14O94880 888 aa24.36■■□□□ 1.49
RXRB-203ENST00000481441 PIGBQ92521 554 aa24.35■■□□□ 1.49
RXRB-203ENST00000481441 KIF3CO14782 793 aa24.35■■□□□ 1.49
RXRB-203ENST00000481441 SSFA2P28290 1259 aa24.35■■□□□ 1.49
RXRB-203ENST00000481441 CICQ96RK0 1608 aaPredicted RBP24.34■■□□□ 1.49
RXRB-203ENST00000481441 NKX1-1Q15270 411 aaPredicted RBP24.33■■□□□ 1.48
RXRB-203ENST00000481441 NCAPD2Q15021 1401 aa24.32■■□□□ 1.48
RXRB-203ENST00000481441 LINC00116Q8NCU8 138 aa24.32■■□□□ 1.48
RXRB-203ENST00000481441 LOC102724428A0A0B4J2F2 783 aa24.31■■□□□ 1.48
RXRB-203ENST00000481441 SIK1P57059 783 aa24.31■■□□□ 1.48
RXRB-203ENST00000481441 KIF13BQ9NQT8 1826 aa24.3■■□□□ 1.48
RXRB-203ENST00000481441 KIAA1551Q9HCM1 1747 aa24.3■■□□□ 1.48
RXRB-203ENST00000481441 EMILIN1Q9Y6C2 1016 aa24.28■■□□□ 1.48
RXRB-203ENST00000481441 TMF1P82094 1093 aa24.27■■□□□ 1.48
RXRB-203ENST00000481441 ITPK1Q13572 414 aa24.27■■□□□ 1.48
RXRB-203ENST00000481441 ANKRD26Q9UPS8 1709 aa24.27■■□□□ 1.48
RXRB-203ENST00000481441 PXDNLA1KZ92 1463 aa24.26■■□□□ 1.47
RXRB-203ENST00000481441 SPG7Q9UQ90 795 aa24.26■■□□□ 1.47
RXRB-203ENST00000481441 N4BP2Q86UW6 1770 aaPredicted RBP24.25■■□□□ 1.47
RXRB-203ENST00000481441 GNPATO15228 680 aa24.25■■□□□ 1.47
RXRB-203ENST00000481441 ASAP1Q9ULH1 1129 aa24.25■■□□□ 1.47
RXRB-203ENST00000481441 MMP10P09238 476 aa24.24■■□□□ 1.47
RXRB-203ENST00000481441 TMOD3Q9NYL9 352 aa24.24■■□□□ 1.47
RXRB-203ENST00000481441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.23■■□□□ 1.476e-11■□□□□ 10.7
RXRB-203ENST00000481441 ATP6V1AP38606 617 aa24.22■■□□□ 1.47
RXRB-203ENST00000481441 APLP1P51693 650 aa24.22■■□□□ 1.47
RXRB-203ENST00000481441 CARD14Q9BXL6 1004 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms