RNA–Protein interactions for RNA: ENST00000481383.1

FXR1-215, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 909 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-215	ENST00000481383	PCDHB9	Q9Y5E1	797 aa		11	□□□□□ -0.65
FXR1-215	ENST00000481383	RNF144A	P50876	292 aa	Predicted RBP	10.99	□□□□□ -0.65
FXR1-215	ENST00000481383	SUZ12	Q15022	739 aa	Known RBP	10.99	□□□□□ -0.65
FXR1-215	ENST00000481383	TMEM259	Q4ZIN3	620 aa		10.99	□□□□□ -0.65
FXR1-215	ENST00000481383	LYPD4	Q6UWN0	246 aa		10.99	□□□□□ -0.65
FXR1-215	ENST00000481383	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.99	□□□□□ -0.65
FXR1-215	ENST00000481383	GOPC	Q9HD26	462 aa		10.99	□□□□□ -0.65
FXR1-215	ENST00000481383	ATP5J2-PTCD1	G3V325	749 aa		10.97	□□□□□ -0.65
FXR1-215	ENST00000481383	IRS1	P35568	1242 aa		10.96	□□□□□ -0.65
FXR1-215	ENST00000481383	SRSF11	Q05519	484 aa	Known RBP	10.96	□□□□□ -0.65
FXR1-215	ENST00000481383	ZNF837	Q96EG3	531 aa	Predicted RBP	10.96	□□□□□ -0.65
FXR1-215	ENST00000481383	MEN1	O00255	615 aa		10.95	□□□□□ -0.66
FXR1-215	ENST00000481383	BCAN	Q96GW7	911 aa		10.95	□□□□□ -0.66
FXR1-215	ENST00000481383		A0A1W2PRU2	124 aa		10.94	□□□□□ -0.66
FXR1-215	ENST00000481383	ERVK-9	P63128	1117 aa		10.94	□□□□□ -0.66
FXR1-215	ENST00000481383	GPR25	O00155	361 aa		10.93	□□□□□ -0.66
FXR1-215	ENST00000481383	CELA2B	P08218	269 aa	Predicted RBP	10.93	□□□□□ -0.66
FXR1-215	ENST00000481383	SCTR	P47872	440 aa		10.93	□□□□□ -0.66
FXR1-215	ENST00000481383	MARS	P56192	900 aa	Known RBP	10.93	□□□□□ -0.66
FXR1-215	ENST00000481383	GPC1	P35052	558 aa		10.92	□□□□□ -0.66
FXR1-215	ENST00000481383	DBN1	Q16643	649 aa		10.92	□□□□□ -0.66
FXR1-215	ENST00000481383	CC2D2B	Q6DHV5	1058 aa		10.92	□□□□□ -0.66
FXR1-215	ENST00000481383	TRIM22	Q8IYM9	498 aa		10.92	□□□□□ -0.66
FXR1-215	ENST00000481383	IL27	Q8NEV9	243 aa		10.92	□□□□□ -0.66
FXR1-215	ENST00000481383	GPR37L1	O60883	481 aa		10.9	□□□□□ -0.66
FXR1-215	ENST00000481383	POU4F2	Q12837	409 aa		10.9	□□□□□ -0.66
FXR1-215	ENST00000481383	RIPOR1	Q6ZS17	1223 aa		10.9	□□□□□ -0.66
FXR1-215	ENST00000481383	TRIM52	Q96A61	297 aa		10.9	□□□□□ -0.66
FXR1-215	ENST00000481383	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.9	□□□□□ -0.66
FXR1-215	ENST00000481383	MAP3K10	Q02779	954 aa		10.89	□□□□□ -0.67
FXR1-215	ENST00000481383	MBIP	Q9NS73	344 aa		10.89	□□□□□ -0.67
FXR1-215	ENST00000481383	NR1H3	Q13133	447 aa		10.88	□□□□□ -0.67
FXR1-215	ENST00000481383	NEUROD2	Q15784	382 aa		10.88	□□□□□ -0.67
FXR1-215	ENST00000481383	SCARF2	Q96GP6	870 aa	Predicted RBP	10.88	□□□□□ -0.67
FXR1-215	ENST00000481383	GMCL1	Q96IK5	515 aa		10.88	□□□□□ -0.67
FXR1-215	ENST00000481383	GRIP2	Q9C0E4	1043 aa		10.88	□□□□□ -0.67
FXR1-215	ENST00000481383	DYRK1B	Q9Y463	629 aa		10.88	□□□□□ -0.67
FXR1-215	ENST00000481383	SLC27A3	Q5K4L6	730 aa		10.87	□□□□□ -0.67
FXR1-215	ENST00000481383	RNF20	Q5VTR2	975 aa		10.87	□□□□□ -0.67
FXR1-215	ENST00000481383	GPAT2	Q6NUI2	795 aa		10.87	□□□□□ -0.67
FXR1-215	ENST00000481383	KANK3	Q6NY19	840 aa		10.87	□□□□□ -0.67
FXR1-215	ENST00000481383	GTPBP3	Q969Y2	492 aa	Known RBP	10.87	□□□□□ -0.67
FXR1-215	ENST00000481383	OSBPL3	Q9H4L5	887 aa		10.87	□□□□□ -0.67
FXR1-215	ENST00000481383	PCDHB11	Q9Y5F2	797 aa		10.87	□□□□□ -0.67
FXR1-215	ENST00000481383	IGF1R	P08069	1367 aa		10.87	□□□□□ -0.67
FXR1-215	ENST00000481383	CLN3	Q13286	438 aa		10.86	□□□□□ -0.67
FXR1-215	ENST00000481383	NBPF10	Q6P3W6	841 aa	Known RBP	10.86	□□□□□ -0.67
FXR1-215	ENST00000481383	CCDC125	Q86Z20	511 aa		10.86	□□□□□ -0.67
FXR1-215	ENST00000481383	NBPF15	Q8N660	670 aa		10.86	□□□□□ -0.67
FXR1-215	ENST00000481383	NLRP3	Q96P20	1036 aa		10.86	□□□□□ -0.67
FXR1-215	ENST00000481383	GAS2L1	Q99501	681 aa	Predicted RBP	10.86	□□□□□ -0.67
FXR1-215	ENST00000481383	ARHGEF10L	Q9HCE6	1279 aa		10.86	□□□□□ -0.67
FXR1-215	ENST00000481383	TRAK2	O60296	914 aa		10.85	□□□□□ -0.67
FXR1-215	ENST00000481383	CYP2U1	Q7Z449	544 aa		10.85	□□□□□ -0.67
FXR1-215	ENST00000481383	MTMR14	Q8NCE2	650 aa		10.84	□□□□□ -0.67
FXR1-215	ENST00000481383	FOXR1	Q6PIV2	292 aa		10.83	□□□□□ -0.68
FXR1-215	ENST00000481383	RAB6B	Q9NRW1	208 aa		10.83	□□□□□ -0.68
FXR1-215	ENST00000481383	SPATA31C2	B4DYI2	1134 aa		10.82	□□□□□ -0.68
FXR1-215	ENST00000481383		H7C1W4	665 aa		10.82	□□□□□ -0.68
FXR1-215	ENST00000481383	MCCD1	P59942	119 aa	Predicted RBP	10.82	□□□□□ -0.68
FXR1-215	ENST00000481383	ACD	Q96AP0	544 aa		10.82	□□□□□ -0.68
FXR1-215	ENST00000481383	ENAM	Q9NRM1	1142 aa		10.81	□□□□□ -0.68
FXR1-215	ENST00000481383	CNTNAP5	Q8WYK1	1306 aa		10.81	□□□□□ -0.68
FXR1-215	ENST00000481383	WASL	O00401	505 aa	Predicted RBP	10.8	□□□□□ -0.68
FXR1-215	ENST00000481383	THBS1	P07996	1170 aa		10.8	□□□□□ -0.68
FXR1-215	ENST00000481383	BANK1	Q8NDB2	785 aa		10.8	□□□□□ -0.68
FXR1-215	ENST00000481383	TIMMDC1	Q9NPL8	285 aa		10.8	□□□□□ -0.68
FXR1-215	ENST00000481383	SNRK	Q9NRH2	765 aa		10.8	□□□□□ -0.68
FXR1-215	ENST00000481383	NDUFB9	Q9Y6M9	179 aa		10.8	□□□□□ -0.68
FXR1-215	ENST00000481383	IL2RA	P01589	272 aa		10.79	□□□□□ -0.68
FXR1-215	ENST00000481383	BCR	P11274	1271 aa		10.79	□□□□□ -0.68
FXR1-215	ENST00000481383	TAS1R3	Q7RTX0	852 aa		10.79	□□□□□ -0.68
FXR1-215	ENST00000481383	TRERF1	Q96PN7	1200 aa		10.79	□□□□□ -0.68
FXR1-215	ENST00000481383	SOCS7	O14512	581 aa		10.78	□□□□□ -0.68
FXR1-215	ENST00000481383	IGHA1	P01876	353 aa		10.78	□□□□□ -0.68
FXR1-215	ENST00000481383	F11	P03951	625 aa		10.78	□□□□□ -0.68
FXR1-215	ENST00000481383	BRPF1	P55201	1214 aa	Predicted RBP	10.78	□□□□□ -0.68
FXR1-215	ENST00000481383	WDR44	Q5JSH3	913 aa		10.78	□□□□□ -0.68
FXR1-215	ENST00000481383	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.78	□□□□□ -0.68
FXR1-215	ENST00000481383	NUCKS1	Q9H1E3	243 aa	Known RBP	10.78	□□□□□ -0.68
FXR1-215	ENST00000481383	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.78	□□□□□ -0.68
FXR1-215	ENST00000481383	MX2	P20592	715 aa		10.77	□□□□□ -0.69
FXR1-215	ENST00000481383	FOXK2	Q01167	660 aa		10.77	□□□□□ -0.69
FXR1-215	ENST00000481383	CNKSR1	Q969H4	720 aa		10.77	□□□□□ -0.69
FXR1-215	ENST00000481383	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.77	□□□□□ -0.69
FXR1-215	ENST00000481383	NEDD1	Q8NHV4	660 aa		10.76	□□□□□ -0.69
FXR1-215	ENST00000481383	ZNF592	Q92610	1267 aa		10.76	□□□□□ -0.69
FXR1-215	ENST00000481383	HRH3	Q9Y5N1	445 aa		10.76	□□□□□ -0.69
FXR1-215	ENST00000481383	GNRH1	P01148	92 aa		10.75	□□□□□ -0.69
FXR1-215	ENST00000481383	CENPC	Q03188	943 aa		10.75	□□□□□ -0.69
FXR1-215	ENST00000481383	DCAF5	Q96JK2	942 aa		10.75	□□□□□ -0.69
FXR1-215	ENST00000481383	ESYT1	Q9BSJ8	1104 aa		10.75	□□□□□ -0.69
FXR1-215	ENST00000481383	ESF1	Q9H501	851 aa	Known RBP	10.75	□□□□□ -0.69
FXR1-215	ENST00000481383	CEP126	Q9P2H0	1117 aa		10.75	□□□□□ -0.69
FXR1-215	ENST00000481383	PHF20L1	A8MW92	1017 aa		10.74	□□□□□ -0.69
FXR1-215	ENST00000481383	ITGB2	P05107	769 aa		10.74	□□□□□ -0.69
FXR1-215	ENST00000481383	PHKA2	P46019	1235 aa		10.74	□□□□□ -0.69
FXR1-215	ENST00000481383	PLA2G4E	Q3MJ16	856 aa		10.74	□□□□□ -0.69
FXR1-215	ENST00000481383	GPAM	Q9HCL2	828 aa		10.74	□□□□□ -0.69
FXR1-215	ENST00000481383	BEND7	Q8N7W2	519 aa	Predicted RBP	10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms