RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 PHF8Q9UPP1 1060 aa6.98□□□□□ -1.29
RTN1-206ENST00000481205 DLC1Q96QB1 1528 aa6.98□□□□□ -1.29
RTN1-206ENST00000481205 FAM43BQ6ZT52 329 aaPredicted RBP6.98□□□□□ -1.29
RTN1-206ENST00000481205 PANK1Q8TE04 598 aa6.98□□□□□ -1.29
RTN1-206ENST00000481205 CFAP53Q96M91 514 aa6.98□□□□□ -1.29
RTN1-206ENST00000481205 XRN1Q8IZH2 1706 aaKnown RBP6.98□□□□□ -1.29
RTN1-206ENST00000481205 ADGRB2O60241 1585 aa6.97□□□□□ -1.29
RTN1-206ENST00000481205 PDE3AQ14432 1141 aa6.97□□□□□ -1.29
RTN1-206ENST00000481205 RRAGDQ9NQL2 400 aaPredicted RBP6.97□□□□□ -1.29
RTN1-206ENST00000481205 POLR3AO14802 1390 aaPredicted RBP6.97□□□□□ -1.29
RTN1-206ENST00000481205 TMEM2Q9UHN6 1383 aa6.97□□□□□ -1.29
RTN1-206ENST00000481205 ABCC11Q96J66 1382 aa6.97□□□□□ -1.29
RTN1-206ENST00000481205 CPS1P31327 1500 aa6.97□□□□□ -1.29
RTN1-206ENST00000481205 SHPRHQ149N8 1683 aa6.97□□□□□ -1.29
RTN1-206ENST00000481205 SPDYE2BA6NHP3 402 aa6.96□□□□□ -1.29
RTN1-206ENST00000481205 SPDYE6P0CI01 402 aa6.96□□□□□ -1.29
RTN1-206ENST00000481205 NWD1Q149M9 1564 aa6.96□□□□□ -1.29
RTN1-206ENST00000481205 SPDYE2Q495Y8 402 aa6.96□□□□□ -1.29
RTN1-206ENST00000481205 SMAP1Q8IYB5 467 aaPredicted RBP6.96□□□□□ -1.29
RTN1-206ENST00000481205 TRMT2AQ8IZ69 625 aaKnown RBP6.96□□□□□ -1.29
RTN1-206ENST00000481205 BCL2L13Q9BXK5 485 aa6.96□□□□□ -1.29
RTN1-206ENST00000481205 UPF2Q9HAU5 1272 aaKnown RBP6.96□□□□□ -1.29
RTN1-206ENST00000481205 ROBO2Q9HCK4 1378 aa6.96□□□□□ -1.29
RTN1-206ENST00000481205 HDAC5Q9UQL6 1122 aa6.96□□□□□ -1.29
RTN1-206ENST00000481205 CEP170BQ9Y4F5 1589 aaPredicted RBP6.96□□□□□ -1.3
RTN1-206ENST00000481205 IGHDP01880 384 aa6.96□□□□□ -1.3
RTN1-206ENST00000481205 PARP9Q8IXQ6 854 aa6.96□□□□□ -1.3
RTN1-206ENST00000481205 TCP11L2Q8N4U5 519 aa6.96□□□□□ -1.3
RTN1-206ENST00000481205 RUNDC1Q96C34 613 aa6.96□□□□□ -1.3
RTN1-206ENST00000481205 ADAMTS13Q76LX8 1427 aa6.96□□□□□ -1.3
RTN1-206ENST00000481205 ATAD2Q6PL18 1390 aa6.96□□□□□ -1.3
RTN1-206ENST00000481205 MAPK8IP3Q9UPT6 1336 aa6.96□□□□□ -1.3
RTN1-206ENST00000481205 APPP05067 770 aa6.96□□□□□ -1.3
RTN1-206ENST00000481205 TMCO4Q5TGY1 634 aa6.96□□□□□ -1.3
RTN1-206ENST00000481205 PUS7Q96PZ0 661 aaKnown RBP6.96□□□□□ -1.3
RTN1-206ENST00000481205 PRR36Q9H6K5 1346 aa6.95□□□□□ -1.3
RTN1-206ENST00000481205 WASLO00401 505 aaPredicted RBP6.95□□□□□ -1.3
RTN1-206ENST00000481205 U2AF1L5P0DN76 240 aaPredicted RBP6.95□□□□□ -1.3
RTN1-206ENST00000481205 U2AF1Q01081 240 aaKnown RBP eCLIP6.95□□□□□ -1.3
RTN1-206ENST00000481205 BECN1Q14457 450 aa6.95□□□□□ -1.3
RTN1-206ENST00000481205 NME9Q86XW9 330 aa6.95□□□□□ -1.3
RTN1-206ENST00000481205 USP32Q8NFA0 1604 aa6.95□□□□□ -1.3
RTN1-206ENST00000481205 TOPAZ1Q8N9V7 1692 aa6.95□□□□□ -1.3
RTN1-206ENST00000481205 TTLL12Q14166 644 aaPredicted RBP6.95□□□□□ -1.3
RTN1-206ENST00000481205 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.95□□□□□ -1.3
RTN1-206ENST00000481205 ANP32BQ92688 251 aaKnown RBP6.95□□□□□ -1.3
RTN1-206ENST00000481205 TERF2IPQ9NYB0 399 aa6.95□□□□□ -1.3
RTN1-206ENST00000481205 USP54Q70EL1 1684 aa6.94□□□□□ -1.3
RTN1-206ENST00000481205 U2SURPO15042 1029 aaKnown RBP6.94□□□□□ -1.3
RTN1-206ENST00000481205 PTMSP20962 102 aa6.94□□□□□ -1.3
RTN1-206ENST00000481205 EFCAB3Q8N7B9 438 aa6.94□□□□□ -1.3
RTN1-206ENST00000481205 PMFBP1Q8TBY8 1022 aa6.94□□□□□ -1.3
RTN1-206ENST00000481205 PTPRUQ92729 1446 aa6.94□□□□□ -1.3
RTN1-206ENST00000481205 TRAK2O60296 914 aa6.94□□□□□ -1.3
RTN1-206ENST00000481205 ONECUT3O60422 494 aaPredicted RBP6.94□□□□□ -1.3
RTN1-206ENST00000481205 MNX1P50219 401 aaPredicted RBP6.94□□□□□ -1.3
RTN1-206ENST00000481205 HDGFL2Q7Z4V5 671 aaPredicted RBP6.94□□□□□ -1.3
RTN1-206ENST00000481205 ZNF622Q969S3 477 aaKnown RBP eCLIP6.94□□□□□ -1.3
RTN1-206ENST00000481205 NUDT16Q96DE0 195 aaKnown RBP6.94□□□□□ -1.3
RTN1-206ENST00000481205 MCCP23508 829 aa6.94□□□□□ -1.3
RTN1-206ENST00000481205 PPP4R3BQ5MIZ7 849 aa6.94□□□□□ -1.3
RTN1-206ENST00000481205 RBM33Q96EV2 1170 aaKnown RBP6.94□□□□□ -1.3
RTN1-206ENST00000481205 MYH16Q9H6N6 1097 aa6.94□□□□□ -1.3
RTN1-206ENST00000481205 PPIP5K1Q6PFW1 1433 aa6.93□□□□□ -1.3
RTN1-206ENST00000481205 NINLQ9Y2I6 1382 aa6.93□□□□□ -1.3
RTN1-206ENST00000481205 DPYSL4O14531 572 aa6.93□□□□□ -1.3
RTN1-206ENST00000481205 FRAT2O75474 233 aaPredicted RBP6.93□□□□□ -1.3
RTN1-206ENST00000481205 RFX1P22670 979 aa6.93□□□□□ -1.3
RTN1-206ENST00000481205 RARSP54136 660 aaKnown RBP6.93□□□□□ -1.3
RTN1-206ENST00000481205 FBXW7Q969H0 707 aa6.93□□□□□ -1.3
RTN1-206ENST00000481205 PSMD1Q99460 953 aa6.93□□□□□ -1.3
RTN1-206ENST00000481205 REPIN1Q9BWE0 567 aaKnown RBP6.93□□□□□ -1.3
RTN1-206ENST00000481205 EMILIN1Q9Y6C2 1016 aa6.93□□□□□ -1.3
RTN1-206ENST00000481205 TECPR2O15040 1411 aa6.93□□□□□ -1.3
RTN1-206ENST00000481205 CACNB1Q02641 598 aaPredicted RBP6.93□□□□□ -1.3
RTN1-206ENST00000481205 SLKQ9H2G2 1235 aaPredicted RBP6.93□□□□□ -1.3
RTN1-206ENST00000481205 HDGFP51858 240 aaKnown RBP6.92□□□□□ -1.3
RTN1-206ENST00000481205 RWDD1Q9H446 243 aaPredicted RBP6.92□□□□□ -1.3
RTN1-206ENST00000481205 CHD2O14647 1828 aaKnown RBP6.92□□□□□ -1.3
RTN1-206ENST00000481205 SOX12O15370 315 aa6.92□□□□□ -1.3
RTN1-206ENST00000481205 MMP14P50281 582 aa6.92□□□□□ -1.3
RTN1-206ENST00000481205 WDR63Q8IWG1 891 aa6.92□□□□□ -1.3
RTN1-206ENST00000481205 CCDC102AQ96A19 550 aa6.92□□□□□ -1.3
RTN1-206ENST00000481205 TPM2P07951 284 aa6.92□□□□□ -1.3
RTN1-206ENST00000481205 RRS1Q15050 365 aaKnown RBP6.92□□□□□ -1.3
RTN1-206ENST00000481205 POLKQ9UBT6 870 aa6.92□□□□□ -1.3
RTN1-206ENST00000481205 TNNQ9UQP3 1299 aa6.92□□□□□ -1.3
RTN1-206ENST00000481205 AMOTL2Q9Y2J4 779 aa6.92□□□□□ -1.3
RTN1-206ENST00000481205 NSD2O96028 1365 aa6.91□□□□□ -1.3
RTN1-206ENST00000481205 COL3A1P02461 1466 aaPredicted RBP6.91□□□□□ -1.3
RTN1-206ENST00000481205 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.91□□□□□ -1.3
RTN1-206ENST00000481205 IQSEC2Q5JU85 1478 aa6.91□□□□□ -1.3
RTN1-206ENST00000481205 DNTTIP2Q5QJE6 756 aaKnown RBP6.91□□□□□ -1.3
RTN1-206ENST00000481205 CHADLQ6NUI6 762 aa6.91□□□□□ -1.3
RTN1-206ENST00000481205 PLEKHG1Q9ULL1 1385 aa6.91□□□□□ -1.3
RTN1-206ENST00000481205 GRXCR2A6NFK2 248 aa6.91□□□□□ -1.3
RTN1-206ENST00000481205 UTP14CQ5TAP6 766 aaKnown RBP6.91□□□□□ -1.3
RTN1-206ENST00000481205 PDZRN3Q9UPQ7 1066 aa6.91□□□□□ -1.3
RTN1-206ENST00000481205 CCDC61Q9Y6R9 512 aa6.91□□□□□ -1.3
RTN1-206ENST00000481205 SEC24BO95487 1268 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms